|
Lines 4-9
Link Here
|
| 4 |
|
4 |
|
| 5 |
EAPI="2" |
5 |
EAPI="2" |
| 6 |
|
6 |
|
|
|
7 |
inherit eutils toolchain-funcs |
| 8 |
|
| 7 |
MY_PV=${PV//./_} |
9 |
MY_PV=${PV//./_} |
| 8 |
|
10 |
|
| 9 |
DESCRIPTION="SHort Read Mapping Package" |
11 |
DESCRIPTION="SHort Read Mapping Package" |
|
Lines 20-25
Link Here
|
| 20 |
|
22 |
|
| 21 |
S="${WORKDIR}/SHRiMP_${MY_PV}" |
23 |
S="${WORKDIR}/SHRiMP_${MY_PV}" |
| 22 |
|
24 |
|
|
|
25 |
src_prepare() { |
| 26 |
epatch "${FILESDIR}"/stdint_h.patch || die |
| 27 |
} |
| 28 |
|
| 23 |
src_configure() { |
29 |
src_configure() { |
| 24 |
sed -i -e '1 a CXXFLAGS+= -O3 -mmmx -msse -msse2' \ |
30 |
sed -i -e '1 a CXXFLAGS+= -O3 -mmmx -msse -msse2' \ |
| 25 |
-e 's/-static//' "${S}/Makefile" || die |
31 |
-e 's/-static//' "${S}/Makefile" || die |