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Gentoo's Bugzilla – Attachment 211269 Details for
Bug 294738
sci-biology/vaal: fails with forced --as-needed
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Build log
vaal-1.2:20091126-171400.log (text/plain), 673.38 KB, created by
Diego Elio Pettenò (RETIRED)
on 2009-11-26 17:31:22 UTC
(
hide
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Description:
Build log
Filename:
MIME Type:
Creator:
Diego Elio Pettenò (RETIRED)
Created:
2009-11-26 17:31:22 UTC
Size:
673.38 KB
patch
obsolete
>>>> Unpacking source... >>>> Unpacking VAAL.1.2.tgz to /var/tmp/portage/sci-biology/vaal-1.2/work >>>> Unpacking VAAL_manual.doc to /var/tmp/portage/sci-biology/vaal-1.2/work >unpack VAAL_manual.doc: file format not recognized. Ignoring. >>>> Source unpacked in /var/tmp/portage/sci-biology/vaal-1.2/work >>>> Preparing source in /var/tmp/portage/sci-biology/vaal-1.2/work/VAAL ... > [32;01m*[0m Applying vaal-1.2-gcc-x86-no-autocast.patch ... >[A[72C [34;01m[ [32;01mok[34;01m ][0m >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-biology/vaal-1.2/work/VAAL ... >./configure --prefix=/usr --build=i686-pc-linux-gnu --host=i686-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib >configure: loading site script /usr/share/config.site >configure: loading site script /usr/share/crossdev/include/site/linux >checking for gawk... gawk >checking for a sed that does not truncate output... /bin/sed >checking for bison... bison -y >checking for i686-pc-linux-gnu-g++... i686-pc-linux-gnu-g++ >checking for C++ compiler default output file name... a.out >checking whether the C++ compiler works... yes >checking whether we are cross compiling... no >checking for suffix of executables... >checking for suffix of object files... o >checking whether we are using the GNU C++ compiler... yes >checking whether i686-pc-linux-gnu-g++ accepts -g... yes >checking for i686-pc-linux-gnu-gcc... i686-pc-linux-gnu-gcc >checking whether we are using the GNU C compiler... yes >checking whether i686-pc-linux-gnu-gcc accepts -g... yes >checking for i686-pc-linux-gnu-gcc option to accept ISO C89... none needed >checking for flex... flex >checking lex output file root... lex.yy >checking lex library... -lfl >checking whether yytext is a pointer... yes >checking whether ln -s works... yes >checking whether make sets $(MAKE)... yes >checking to see if we need to include the Boost libraries... yes >checking to see if we need to include the Xerces libraries... no >checking to see if we need to include the GMP libraries... no >checking for dirent.h that defines DIR... yes >checking for library containing opendir... none required >checking how to run the C preprocessor... i686-pc-linux-gnu-gcc -E >checking for grep that handles long lines and -e... /bin/grep >checking for egrep... /bin/grep -E >checking for ANSI C header files... yes >checking for sys/wait.h that is POSIX.1 compatible... yes >checking for sys/types.h... yes >checking for sys/stat.h... yes >checking for stdlib.h... yes >checking for string.h... yes >checking for memory.h... yes >checking for strings.h... yes >checking for inttypes.h... yes >checking for stdint.h... yes >checking for unistd.h... yes >checking fcntl.h usability... yes >checking fcntl.h presence... yes >checking for fcntl.h... yes >checking float.h usability... yes >checking float.h presence... yes >checking for float.h... yes >checking limits.h usability... yes >checking limits.h presence... yes >checking for limits.h... yes >checking locale.h usability... yes >checking locale.h presence... yes >checking for locale.h... yes >checking for memory.h... (cached) yes >checking netinet/in.h usability... yes >checking netinet/in.h presence... yes >checking for netinet/in.h... yes >checking stddef.h usability... yes >checking stddef.h presence... yes >checking for stddef.h... yes >checking for stdlib.h... (cached) yes >checking for string.h... (cached) yes >checking for strings.h... (cached) yes >checking sys/file.h usability... yes >checking sys/file.h presence... yes >checking for sys/file.h... yes >checking sys/param.h usability... yes >checking sys/param.h presence... yes >checking for sys/param.h... yes >checking sys/time.h usability... yes >checking sys/time.h presence... yes >checking for sys/time.h... yes >checking for unistd.h... (cached) yes >checking wchar.h usability... yes >checking wchar.h presence... yes >checking for wchar.h... yes >configure: VENDOR wasn't set, setting to a default >checking for getline in -lm... yes >checking for stdbool.h that conforms to C99... yes >checking for _Bool... yes >checking for an ANSI C-conforming const... yes >checking for inline... inline >checking for mode_t... yes >checking for off_t... yes >checking for pid_t... yes >checking for C/C++ restrict keyword... __restrict >checking for size_t... yes >checking for ssize_t... yes >checking whether time.h and sys/time.h may both be included... yes >checking whether struct tm is in sys/time.h or time.h... time.h >checking for uint16_t... yes >checking for uint32_t... yes >checking for uint64_t... yes >checking for uint8_t... yes >checking for working volatile... yes >checking for ptrdiff_t... yes >checking for ulong... yes >checking whether closedir returns void... no >checking for error_at_line... yes >checking vfork.h usability... no >checking vfork.h presence... no >checking for vfork.h... no >checking for fork... yes >checking for vfork... yes >checking for working fork... yes >checking for working vfork... (cached) yes >checking whether i686-pc-linux-gnu-gcc needs -traditional... no >checking whether lstat dereferences a symlink specified with a trailing slash... yes >checking whether lstat accepts an empty string... no >checking whether lstat dereferences a symlink specified with a trailing slash... (cached) yes >checking for stdlib.h... (cached) yes >checking for GNU libc compatible malloc... yes >checking for working memcmp... yes >checking for stdlib.h... (cached) yes >checking for unistd.h... (cached) yes >checking for getpagesize... yes >checking for working mmap... yes >checking for stdlib.h... (cached) yes >checking for GNU libc compatible realloc... yes >checking sys/select.h usability... yes >checking sys/select.h presence... yes >checking for sys/select.h... yes >checking sys/socket.h usability... yes >checking sys/socket.h presence... yes >checking for sys/socket.h... yes >checking types of arguments for select... int,fd_set *,struct timeval * >checking return type of signal handlers... void >checking whether stat accepts an empty string... no >checking for strftime... yes >checking for alarm... yes >checking for atexit... yes >checking for bzero... yes >checking for dup2... yes >checking for floor... no >checking for ftruncate... yes >checking for getcwd... yes >checking for gethostname... yes >checking for getpagesize... (cached) yes >checking for gettimeofday... yes >checking for memchr... yes >checking for memmove... yes >checking for memset... yes >checking for mkdir... yes >checking for mkfifo... yes >checking for munmap... yes >checking for pow... no >checking for putenv... yes >checking for realpath... yes >checking for regcomp... yes >checking for rint... no >checking for rmdir... yes >checking for select... yes >checking for setenv... yes >checking for setlocale... yes >checking for sqrt... no >checking for strcasecmp... yes >checking for strchr... yes >checking for strdup... yes >checking for strerror... yes >checking for strncasecmp... yes >checking for strrchr... yes >checking for strstr... yes >checking for strtol... yes >checking for strtoul... yes >checking for uname... yes >checking to see that gcc is at least version 4.3.2... Yes, gcc version 4.4.2 is fine >checking for boostlib >= 1.37.0... yes >found boost version >checking for boost library name... yes, found with the pattern libboost_filesystem-mt.a >checking whether byte ordering is bigendian... no >configure: creating ./config.status >config.status: creating Makefile >config.status: creating config.h >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-biology/vaal-1.2/work/VAAL ... >make -j14 >i686-pc-linux-gnu-g++ ./util/checkLock.cc -o bin/checkLock >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./Basevector.cc -o obj/Basevector.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./Bitvector.cc -o obj/Bitvector.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./FastIfstream.cc -o obj/FastIfstream.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./FetchReads.cc -o obj/FetchReads.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./FetchReadsAmb.cc -o obj/FetchReadsAmb.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./Feudal.cc -o obj/Feudal.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./FeudalMimic.cc -o obj/FeudalMimic.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./FeudalReadPart.cc -o obj/FeudalReadPart.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./MemberOf.cc -o obj/MemberOf.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./ParseRange.cc -o obj/ParseRange.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./ParseSet.cc -o obj/ParseSet.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./Qualvector.cc -o obj/Qualvector.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./String.cc -o obj/String.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./TokenizeString.cc -o obj/TokenizeString.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:24 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./Vec.cc -o obj/Vec.o >./FeudalReadPart.cc: In member function 'void read_part::Fetch(longlong, longlong, char*)': >./FeudalReadPart.cc:24: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:24 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./VecString.cc -o obj/VecString.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:25 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./charTranslations.cc -o obj/charTranslations.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:25 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./math/Arith.cc -o obj/math/Arith.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:25 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./math/Functions.cc -o obj/math/Functions.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:25 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./math/HoInterval.cc -o obj/math/HoInterval.o >cp ./random/Random.cc ./random/Random.c >cc -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -c ./random/Random.cc -w -Drandom=randomx -Dsrandom=srandomx -o obj/random/Random.o >rm ./random/Random.c >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:26 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./system/Assert.cc -o obj/system/Assert.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:26 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./system/Crash.cc -o obj/system/Crash.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:26 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./system/Exit.cc -o obj/system/Exit.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:26 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./system/MemTracker.cc -o obj/system/MemTracker.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:26 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./system/ParsedArgs.cc -o obj/system/ParsedArgs.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:26 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./system/ProcBuf.cc -o obj/system/ProcBuf.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:26 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./system/RunTime.cc -o obj/system/RunTime.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:26 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./system/System.cc -o obj/system/System.o >./Bitvector.cc: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = bitvector]': >./Bitvector.cc:177: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Bitvector.cc:97: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = bitvector, A = unsigned int]': >./Bitvector.cc:101: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = bitvector, A = unsigned int]': >./Bitvector.cc:101: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Bitvector.cc:97: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = bitvector, A = unsigned int]': >./Bitvector.cc:101: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Bitvector.cc:97: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = bitvector, A = unsigned int]': >./Bitvector.cc:101: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = bitvector, A = unsigned int]': >./Bitvector.cc:101: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:27 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./system/TraceVal.cc -o obj/system/TraceVal.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:27 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./system/Types.cc -o obj/system/Types.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:27 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./util/Fastb.cc -o obj/util/Fastb.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:28 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./util/Kronos.cc -o obj/util/Kronos.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:28 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./Alignment.cc -o obj/Alignment.o >In file included from ./VecString.cc:13: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = String, A = char]': >./VecString.cc:14: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = String, A = char]': >./VecString.cc:14: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./VecString.cc:13: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = String, A = char]': >./VecString.cc:14: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./VecString.cc:13: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = String, A = char]': >./VecString.cc:14: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = String]': >./VecString.cc:14: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = String, A = char]': >./VecString.cc:14: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:28 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./BasevectorTools.cc -o obj/BasevectorTools.o >./Basevector.cc: In member function 'void basevector::SetToSubOf(const basevector&, unsigned int, int, int)': >./Basevector.cc:791: warning: comparison between signed and unsigned integer expressions >./Basevector.cc: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = basevector]': >./Basevector.cc:951: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Basevector.cc:18: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]': >./Basevector.cc:970: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = basevector, A = unsigned int]': >./Basevector.cc:970: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Basevector.cc:18: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = basevector, A = unsigned int]': >./Basevector.cc:970: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Basevector.cc:18: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = basevector, A = unsigned int]': >./Basevector.cc:970: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = basevector, A = unsigned int]': >./Basevector.cc:970: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:28 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./BlockAlign.cc -o obj/BlockAlign.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:29 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./Charvector.cc -o obj/Charvector.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:29 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./CompressedSequence.cc -o obj/CompressedSequence.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:29 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./FastaConverter.cc -o obj/FastaConverter.o >./math/HoInterval.h: In function 'void OverlapIndices(const ho_interval&, const vec<ho_interval>&, int, vec<int>&)': >./math/HoInterval.h:24: warning: assuming signed overflow does not occur when assuming that (X - c) > X is always false >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:29 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./FastaFileset.cc -o obj/FastaFileset.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:29 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./FastaFilestream.cc -o obj/FastaFilestream.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:30 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./FastaFilestreamPreview.cc -o obj/FastaFilestreamPreview.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:30 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./FastaNameParser.cc -o obj/FastaNameParser.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:30 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./FastaVerifier.cc -o obj/FastaVerifier.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:30 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./IndexedAlignmentPlusVector.cc -o obj/IndexedAlignmentPlusVector.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:31 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./PackAlign.cc -o obj/PackAlign.o >In file included from ./BlockAlign.h:10, > from ./BlockAlign.cc:6: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./BlockAlign.h:10, > from ./BlockAlign.cc:6: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:31 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./PrintAlignment.cc -o obj/PrintAlignment.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:31 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./ReadPairing.cc -o obj/ReadPairing.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:31 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./ScoreAlignment.cc -o obj/ScoreAlignment.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:31 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./SeqInterval.cc -o obj/SeqInterval.o >In file included from ./Charvector.cc:11: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<char>, A = char]': >./Charvector.cc:15: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = serfvec<char>, A = char]': >./Charvector.cc:15: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Charvector.cc:11: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = serfvec<char>, A = char]': >./Charvector.cc:15: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Charvector.cc:11: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<char>, A = char]': >./Charvector.cc:15: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<char>]': >./Charvector.cc:15: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = serfvec<char>, A = char]': >./Charvector.cc:15: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:32 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./VecAlignmentPlus.cc -o obj/VecAlignmentPlus.o >./CompressedSequence.cc: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = CompressedSequence]': >./CompressedSequence.cc:504: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./CompressedSequence.cc:521: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = CompressedSequence, A = short unsigned int]': >./CompressedSequence.cc:525: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = CompressedSequence, A = short unsigned int]': >./CompressedSequence.cc:525: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./CompressedSequence.cc:521: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = CompressedSequence, A = short unsigned int]': >./CompressedSequence.cc:525: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./CompressedSequence.cc:521: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = CompressedSequence, A = short unsigned int]': >./CompressedSequence.cc:525: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = CompressedSequence, A = short unsigned int]': >./CompressedSequence.cc:525: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:32 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/AlignCollector.cc -o obj/lookup/AlignCollector.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:33 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/Hit.cc -o obj/lookup/Hit.o >./ReadPairing.cc: In function 'void ReadsToPairs(const String&, const vec<int>&, vec<read_pairing>&, const String&)': >./ReadPairing.cc:112: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./CoreTools.h:16, > from ./ReadPairing.cc:16: >./Vec.h: In function 'void BinaryReadSubset(const String&, const vec<int>&, vec<U>&) [with T = int]': >./ReadPairing.cc:102: instantiated from here >./Vec.h:1287: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:33 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/HitReceiver.cc -o obj/lookup/HitReceiver.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:34 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/ImperfectLookup.cc -o obj/lookup/ImperfectLookup.o >In file included from ./SeqInterval.cc:6: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >In file included from ./SeqInterval.cc:7: >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = seq_interval]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = seq_interval]' >./SeqInterval.cc:8: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = seq_interval]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = seq_interval]' >./SeqInterval.cc:8: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./system/System.cc: In function 'String GetTempDir(String)': >./system/System.cc:1056: warning: ignoring return value of 'char* mkdtemp(char*)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:34 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/ImperfectLookupTable.cc -o obj/lookup/ImperfectLookupTable.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:35 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/LookAlign.cc -o obj/lookup/LookAlign.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:35 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/LookupTable.cc -o obj/lookup/LookupTable.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:35 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/PerfectCount.cc -o obj/lookup/PerfectCount.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:36 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/PerfectLookup.cc -o obj/lookup/PerfectLookup.o >./VecAlignmentPlus.cc: In function 'void ReadAlignsIndex(const String&, int, int, vec<int>&)': >./VecAlignmentPlus.cc:452: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecAlignmentPlus.cc:459: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:36 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./pairwise_aligners/Mutmer.cc -o obj/pairwise_aligners/Mutmer.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:36 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./pairwise_aligners/SmithWatBandedA.cc -o obj/pairwise_aligners/SmithWatBandedA.o >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/HitReceiver.h:18, > from ./lookup/HitReceiver.cc:15: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/HitReceiver.h:18, > from ./lookup/HitReceiver.cc:15: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:37 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./solid/Solid.cc -o obj/solid/Solid.o >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/Hit.cc:11: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/Hit.cc:11: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:37 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/LookupTableBuilder.cc -o obj/lookup/LookupTableBuilder.o >./Feudal.cc: In function 'void DivideMastervecFile(const String&)': >./Feudal.cc:92: warning: ignoring return value of 'int ftruncate(int, __off64_t)', declared with attribute warn_unused_result >./Feudal.cc: In function 'longlong MastervecFileRawCount(const String&, int)': >./Feudal.cc:108: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./Feudal.cc:128: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./Feudal.cc:130: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./Feudal.cc: In function 'void ConcatenateMastervecData(const String&, const String&)': >./Feudal.cc:164: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./Feudal.cc:168: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./Feudal.cc:197: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./Feudal.cc: In function 'void MergeMastervecs(const String&, const String&, const String&)': >./Feudal.cc:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./Feudal.cc:279: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Feudal.cc:14: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<unsigned char>, A = unsigned char]': >./Feudal.cc:304: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = serfvec<unsigned char>, A = unsigned char]': >./Feudal.cc:304: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Feudal.cc:14: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = serfvec<unsigned char>, A = unsigned char]': >./Feudal.cc:304: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Feudal.cc:14: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<unsigned char>, A = unsigned char]': >./Feudal.cc:304: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<unsigned char>]': >./Feudal.cc:304: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = serfvec<unsigned char>, A = unsigned char]': >./Feudal.cc:304: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<short unsigned int>, A = short unsigned int]': >./Feudal.cc:310: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = serfvec<short unsigned int>, A = short unsigned int]': >./Feudal.cc:310: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Feudal.cc:14: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = serfvec<short unsigned int>, A = short unsigned int]': >./Feudal.cc:310: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Feudal.cc:14: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<short unsigned int>, A = short unsigned int]': >./Feudal.cc:310: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<short unsigned int>]': >./Feudal.cc:310: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = serfvec<short unsigned int>, A = short unsigned int]': >./Feudal.cc:310: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<float>, A = float]': >./Feudal.cc:317: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = serfvec<float>, A = float]': >./Feudal.cc:317: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Feudal.cc:14: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = serfvec<float>, A = float]': >./Feudal.cc:317: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Feudal.cc:14: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<float>, A = float]': >./Feudal.cc:317: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<float>]': >./Feudal.cc:317: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = serfvec<float>, A = float]': >./Feudal.cc:317: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<int>, A = int]': >./Feudal.cc:318: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = serfvec<int>, A = int]': >./Feudal.cc:318: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Feudal.cc:14: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = serfvec<int>, A = int]': >./Feudal.cc:318: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Feudal.cc:14: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<int>, A = int]': >./Feudal.cc:318: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<int>]': >./Feudal.cc:318: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = serfvec<int>, A = int]': >./Feudal.cc:318: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<unsigned int>, A = unsigned int]': >./Feudal.cc:319: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = serfvec<unsigned int>, A = unsigned int]': >./Feudal.cc:319: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Feudal.cc:14: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = serfvec<unsigned int>, A = unsigned int]': >./Feudal.cc:319: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Feudal.cc:14: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<unsigned int>, A = unsigned int]': >./Feudal.cc:319: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<unsigned int>]': >./Feudal.cc:319: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = serfvec<unsigned int>, A = unsigned int]': >./Feudal.cc:319: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./Vec.cc:30: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >In file included from ./Vec.cc:31: >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = char]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = char]' >./Vec.cc:400: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = char]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = char]' >./Vec.cc:400: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = unsigned char]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = unsigned char]' >./Vec.cc:401: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = unsigned char]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = unsigned char]' >./Vec.cc:401: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = int]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = int]' >./Vec.cc:402: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = int]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = int]' >./Vec.cc:402: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = long long int]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = long long int]' >./Vec.cc:403: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = long long int]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = long long int]' >./Vec.cc:403: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = float]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = float]' >./Vec.cc:404: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = float]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = float]' >./Vec.cc:404: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = double]': >./VecTemplate.h:245: instantiated from 'void BinaryReadSubset3(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = double]' >./Vec.cc:411: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = double]': >./VecTemplate.h:281: instantiated from 'void BinaryReadRange3(const String&, longlong, longlong, vec<U>&, bool) [with T = double]' >./Vec.cc:411: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:38 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/MakeLookupTable.cc -o obj/lookup/MakeLookupTable.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:38 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./util/Qualb.cc -o obj/util/Qualb.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:38 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/FlowAlignSummary.cc -o obj/lookup/FlowAlignSummary.o >In file included from ./lookup/AlignCollector.h:21, > from ./lookup/AlignCollector.cc:14: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/AlignCollector.h:18, > from ./lookup/AlignCollector.cc:15: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/AlignCollector.h:18, > from ./lookup/AlignCollector.cc:15: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:38 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/QueryLookupTable.cc -o obj/lookup/QueryLookupTable.o >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/PerfectCount.cc:19: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/PerfectCount.cc:19: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:39 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/QueryLookupTableCore.cc -o obj/lookup/QueryLookupTableCore.o >In file included from ./lookup/PerfectLookup.cc:18: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/PerfectLookup.cc:18: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./solid/Solid.h:18, > from ./solid/Solid.cc:18: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./solid/Solid.h:18, > from ./solid/Solid.cc:18: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:39 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./pairwise_aligners/AlignFromMutmers.cc -o obj/pairwise_aligners/AlignFromMutmers.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:39 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./pairwise_aligners/AlignFromMutmersAndSW.cc -o obj/pairwise_aligners/AlignFromMutmersAndSW.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:39 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./pairwise_aligners/MakeAlignsMethod.cc -o obj/pairwise_aligners/MakeAlignsMethod.o >In file included from ./lookup/FlowAlignSummary.cc:4: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/FlowAlignSummary.cc:4: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:40 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./pairwise_aligners/SmithWatAffine.cc -o obj/pairwise_aligners/SmithWatAffine.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:40 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./pairwise_aligners/SmithWatFree.cc -o obj/pairwise_aligners/SmithWatFree.o >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/LookupTable.cc:22: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/LookupTable.cc:22: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookupTable.cc: In member function 'void lookup_table::ReadChunk(int)': >./lookup/LookupTable.cc:416: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookupTable.cc:420: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:41 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/ShortQueryLookup.cc -o obj/lookup/ShortQueryLookup.o >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/LookupTableBuilder.cc:21: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/LookupTableBuilder.cc:21: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:41 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./FeudalFileWriter.cc -o obj/FeudalFileWriter.o >In file included from ./PackAlign.cc:19: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >In file included from ./PackAlign.cc:17: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<placement_mark>, A = placement_mark]': >./PackAlign.cc:1776: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = serfvec<placement_mark>, A = placement_mark]': >./PackAlign.cc:1776: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./PackAlign.cc:17: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = serfvec<placement_mark>, A = placement_mark]': >./PackAlign.cc:1776: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./PackAlign.cc:17: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<placement_mark>, A = placement_mark]': >./PackAlign.cc:1776: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<placement_mark>]': >./PackAlign.cc:1776: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = serfvec<placement_mark>, A = placement_mark]': >./PackAlign.cc:1776: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./PackAlign.cc:20: >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = placement_mark]': >./VecTemplate.h:245: instantiated from 'void BinaryReadSubset3(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = placement_mark]' >./PackAlign.cc:1774: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = placement_mark]': >./VecTemplate.h:281: instantiated from 'void BinaryReadRange3(const String&, longlong, longlong, vec<U>&, bool) [with T = placement_mark]' >./PackAlign.cc:1774: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:41 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./HashSimple.cc -o obj/HashSimple.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:41 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./KmerRecord.cc -o obj/KmerRecord.o >In file included from ./lookup/AlignCollector.h:21, > from ./lookup/ImperfectLookup.cc:14: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/AlignCollector.h:18, > from ./lookup/ImperfectLookup.cc:15: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/AlignCollector.h:18, > from ./lookup/ImperfectLookup.cc:15: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:41 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./KmerShape.cc -o obj/KmerShape.o >./FeudalFileWriter.cc: In member function 'void FeudalFileWriter::write(const void*, unsigned int)': >./FeudalFileWriter.cc:83: warning: comparison between signed and unsigned integer expressions >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:42 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./SortKmers.cc -o obj/SortKmers.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:42 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./pairwise_aligners/MaxMutmerFromMer.cc -o obj/pairwise_aligners/MaxMutmerFromMer.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:42 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/KmerPath.cc -o obj/paths/KmerPath.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:43 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/KmerPathInterval.cc -o obj/paths/KmerPathInterval.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:43 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/MakeAlignsPathsParallelX.cc -o obj/paths/MakeAlignsPathsParallelX.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:44 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/ReadsToPathsCoreX.cc -o obj/paths/ReadsToPathsCoreX.o >In file included from ./SortKmers.h:20, > from ./SortKmersImpl.h:13, > from ./SortKmers.cc:11: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:44 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./polymorphism/TruePoly.cc -o obj/polymorphism/TruePoly.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:44 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./polymorphism/TruePolyCore.cc -o obj/polymorphism/TruePolyCore.o >In file included from ./lookup/AlignCollector.h:21, > from ./lookup/ImperfectLookup.h:54, > from ./lookup/ImperfectLookupTable.cc:44: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >In file included from ./lookup/ImperfectLookup.h:51, > from ./lookup/ImperfectLookupTable.cc:45: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/ImperfectLookup.h:51, > from ./lookup/ImperfectLookupTable.cc:45: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/ImperfectLookup.h:50, > from ./lookup/ImperfectLookupTable.cc:45: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = basevector, A = unsigned int]': >./FastaFileset.h:32: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]': >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]' >./lookup/ImperfectLookupTable.cc:223: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<unsigned char>, A = unsigned char]': >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = serfvec<unsigned char>, A = unsigned char]' >./lookup/ImperfectLookupTable.cc:231: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<unsigned char>]': >./FeudalTemplate.h:469: instantiated from 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<unsigned char>, A = unsigned char]' >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = serfvec<unsigned char>, A = unsigned char]' >./lookup/ImperfectLookupTable.cc:231: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:44 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./sort_kmers/SortKmersA.cc -o obj/sort_kmers/SortKmersA.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:45 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./sort_kmers/SortKmersB.cc -o obj/sort_kmers/SortKmersB.o >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/MakeLookupTable.cc:78: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/MakeLookupTable.cc:78: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:45 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./sort_kmers/SortKmersC.cc -o obj/sort_kmers/SortKmersC.o >In file included from ./lookup/LookAlign.cc:22: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >In file included from ./BlockAlign.h:10, > from ./lookup/LookAlign.cc:22: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./BlockAlign.h:10, > from ./lookup/LookAlign.cc:22: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/LookAlign.cc:23: >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = GaplessAlign]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = GaplessAlign]' >./lookup/LookAlign.cc:1252: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = GaplessAlign]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = GaplessAlign]' >./lookup/LookAlign.cc:1252: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:45 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./sort_kmers/SortKmersD.cc -o obj/sort_kmers/SortKmersD.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:45 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./sort_kmers/SortKmersE.cc -o obj/sort_kmers/SortKmersE.o >In file included from ./paths/KmerPathInterval.cc:10: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >./paths/KmerPathInterval.cc: In function 'void Prepare(vec<U>&) [with TAG = tagged_rpint]': >./paths/KmerPathInterval.cc:58: instantiated from here >./paths/KmerPathInterval.cc:50: warning: comparison between signed and unsigned integer expressions >./paths/KmerPathInterval.cc: In function 'void Prepare(vec<U>&) [with TAG = big_tagged_rpint]': >./paths/KmerPathInterval.cc:59: instantiated from here >./paths/KmerPathInterval.cc:50: warning: comparison between signed and unsigned integer expressions >./paths/KmerPathInterval.cc: In function 'void Prepare(vec<U>&) [with TAG = BIG_tagged_rpint]': >./paths/KmerPathInterval.cc:60: instantiated from here >./paths/KmerPathInterval.cc:50: warning: comparison between signed and unsigned integer expressions >In file included from ./paths/KmerPathInterval.cc:11: >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = tagged_rpint]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = tagged_rpint]' >./paths/KmerPathInterval.cc:336: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = tagged_rpint]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = tagged_rpint]' >./paths/KmerPathInterval.cc:336: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = big_tagged_rpint]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = big_tagged_rpint]' >./paths/KmerPathInterval.cc:337: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = big_tagged_rpint]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = big_tagged_rpint]' >./paths/KmerPathInterval.cc:337: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = BIG_tagged_rpint]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = BIG_tagged_rpint]' >./paths/KmerPathInterval.cc:338: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = BIG_tagged_rpint]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = BIG_tagged_rpint]' >./paths/KmerPathInterval.cc:338: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/KmerPathInterval.cc:11: >./VecTemplate.h: In member function 'void Binary3Iter<T>::FillBuffer() [with T = big_tagged_rpint]': >./VecTemplate.h:526: warning: '<anonymous>' is used uninitialized in this function >./VecTemplate.h: In member function 'void Binary3Iter<T>::FillBuffer() [with T = tagged_rpint]': >./VecTemplate.h:526: warning: '<anonymous>' is used uninitialized in this function >./VecTemplate.h: In member function 'void Binary3Iter<T>::FillBuffer() [with T = BIG_tagged_rpint]': >./VecTemplate.h:526: warning: '<anonymous>' is used uninitialized in this function >In file included from ./paths/KmerPathInterval.cc:11: >./VecTemplate.h: In function 'void BinaryRead2Or3(const String&, vec<U>&, int, bool) [with T = big_tagged_rpint]': >./VecTemplate.h:191: warning: '<anonymous>' is used uninitialized in this function >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = big_tagged_rpint]': >./VecTemplate.h:263: warning: '<anonymous>' is used uninitialized in this function >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = big_tagged_rpint]': >./VecTemplate.h:225: warning: '<anonymous>' is used uninitialized in this function >./VecTemplate.h: In function 'void BinaryRead2Or3(const String&, vec<U>&, int, bool) [with T = tagged_rpint]': >./VecTemplate.h:191: warning: '<anonymous>' is used uninitialized in this function >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = tagged_rpint]': >./VecTemplate.h:263: warning: '<anonymous>' is used uninitialized in this function >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = tagged_rpint]': >./VecTemplate.h:225: warning: '<anonymous>' is used uninitialized in this function >./VecTemplate.h: In function 'void BinaryRead2Or3(const String&, vec<U>&, int, bool) [with T = BIG_tagged_rpint]': >./VecTemplate.h:191: warning: '<anonymous>' is used uninitialized in this function >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = BIG_tagged_rpint]': >./VecTemplate.h:263: warning: '<anonymous>' is used uninitialized in this function >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = BIG_tagged_rpint]': >./VecTemplate.h:225: warning: '<anonymous>' is used uninitialized in this function >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:47 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./sort_kmers/SortKmersF.cc -o obj/sort_kmers/SortKmersF.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:50 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./sort_kmers/SortKmersG.cc -o obj/sort_kmers/SortKmersG.o >In file included from ./paths/KmerPath.cc:20: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]': >./paths/KmerPath.cc:23: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]': >./paths/KmerPath.cc:23: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/KmerPath.cc:20: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = KmerPath, A = KmerPathInterval]': >./paths/KmerPath.cc:23: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/KmerPath.cc:20: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]': >./paths/KmerPath.cc:23: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = KmerPath]': >./paths/KmerPath.cc:23: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = KmerPath, A = KmerPathInterval]': >./paths/KmerPath.cc:23: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:52 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./sort_kmers/SortKmersH.cc -o obj/sort_kmers/SortKmersH.o >In file included from ./polymorphism/TruePolyCore.cc:26: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >In file included from ./polymorphism/TruePolyCore.cc:27: >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = poly]': >./VecTemplate.h:245: instantiated from 'void BinaryReadSubset3(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = poly]' >./polymorphism/TruePolyCore.cc:459: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = poly]': >./VecTemplate.h:281: instantiated from 'void BinaryReadRange3(const String&, longlong, longlong, vec<U>&, bool) [with T = poly]' >./polymorphism/TruePolyCore.cc:459: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:52 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./sort_kmers/SortKmersI.cc -o obj/sort_kmers/SortKmersI.o >In file included from ./lookup/AlignCollector.h:21, > from ./lookup/ShortQueryLookup.cc:31: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/HitReceiver.h:18, > from ./lookup/ShortQueryLookup.cc:31: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/PerfectCount.h:17, > from ./lookup/Hit.h:17, > from ./lookup/LookupTable.h:18, > from ./lookup/HitReceiver.h:18, > from ./lookup/ShortQueryLookup.cc:31: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/ImperfectLookup.h:50, > from ./lookup/ShortQueryLookup.cc:33: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = basevector, A = unsigned int]': >./FastaFileset.h:32: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]': >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]' >./lookup/ShortQueryLookup.cc:276: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:54 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./system/Threads.cc -o obj/system/Threads.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:55 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./system/WorklistUtils.cc -o obj/system/WorklistUtils.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:55 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/LookAlignFinder.cc -o obj/lookup/LookAlignFinder.o >In file included from ./lookup/LookAlignFinder.h:14, > from ./lookup/LookAlignFinder.cc:16: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/LookAlignFinder.h:14, > from ./lookup/LookAlignFinder.cc:16: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:14:57 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./lookup/LookAlignSort.cc -o obj/lookup/LookAlignSort.o >In file included from ./SortKmers.h:20, > from ./SortKmersImpl.h:13, > from ./sort_kmers/SortKmersF.cc:10: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersF.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersF.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:00 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./math/Matrix.cc -o obj/math/Matrix.o >In file included from ./lookup/LookAlignSort.h:14, > from ./lookup/LookAlignSort.cc:3: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/LookAlignSort.h:14, > from ./lookup/LookAlignSort.cc:3: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:02 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./math/Permutation.cc -o obj/math/Permutation.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:05 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./micro/MicroKillVec.cc -o obj/micro/MicroKillVec.o >In file included from ./SortKmers.h:20, > from ./SortKmersImpl.h:13, > from ./sort_kmers/SortKmersG.cc:10: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersG.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersG.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:07 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./polymorphism/VAAL0.cc -o obj/polymorphism/VAAL0.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:08 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./random/Shuffle.cc -o obj/random/Shuffle.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:09 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./solexa/FourBase.cc -o obj/solexa/FourBase.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:10 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./solexa/FourBase2.cc -o obj/solexa/FourBase2.o >In file included from ./solexa/SolexaTools.h:19, > from ./polymorphism/VAAL0.cc:20: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./solexa/SolexaTools.h:19, > from ./polymorphism/VAAL0.cc:20: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:11 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./solexa/SolexaTools.cc -o obj/solexa/SolexaTools.o >In file included from ./solexa/FourBase2.cc:18: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<four_base2>, A = four_base2]': >./solexa/FourBase2.cc:42: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = serfvec<four_base2>, A = four_base2]': >./solexa/FourBase2.cc:42: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./solexa/FourBase2.cc:18: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = serfvec<four_base2>, A = four_base2]': >./solexa/FourBase2.cc:42: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./solexa/FourBase2.cc:18: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<four_base2>, A = four_base2]': >./solexa/FourBase2.cc:42: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<four_base2>]': >./solexa/FourBase2.cc:42: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = serfvec<four_base2>, A = four_base2]': >./solexa/FourBase2.cc:42: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:13 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./system/StdioWrapper.cc -o obj/system/StdioWrapper.o >In file included from ./SortKmers.h:20, > from ./SortKmersImpl.h:13, > from ./sort_kmers/SortKmersH.cc:10: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersH.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersH.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersH.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:15 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./util/BaitMap.cc -o obj/util/BaitMap.o >In file included from ./solexa/FourBase.cc:18: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<four_base>, A = four_base]': >./solexa/FourBase.cc:42: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = serfvec<four_base>, A = four_base]': >./solexa/FourBase.cc:42: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./solexa/FourBase.cc:18: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = serfvec<four_base>, A = four_base]': >./solexa/FourBase.cc:42: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./solexa/FourBase.cc:18: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<four_base>, A = four_base]': >./solexa/FourBase.cc:42: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<four_base>]': >./solexa/FourBase.cc:42: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = serfvec<four_base>, A = four_base]': >./solexa/FourBase.cc:42: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:16 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./Equiv.cc -o obj/Equiv.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:16 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./PairsHandler.cc -o obj/PairsHandler.o >In file included from ./SortKmers.h:20, > from ./SortKmersImpl.h:13, > from ./sort_kmers/SortKmersD.cc:10: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersD.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersD.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersD.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersD.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:17 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./VecOverlap.cc -o obj/VecOverlap.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:17 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./graph/Digraph.cc -o obj/graph/Digraph.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:19 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./graphics/BasicGraphics.cc -o obj/graphics/BasicGraphics.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:19 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./graphics/Color.cc -o obj/graphics/Color.o >In file included from ./lookup/QueryLookupTableCore.cc:449: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/QueryLookupTableCore.cc:449: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/QueryLookupTableCore.cc: In function 'void QueryLookupTableCore(int, char**)': >./lookup/QueryLookupTableCore.cc:2021: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:21 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./pairwise_aligners/MatchList.cc -o obj/pairwise_aligners/MatchList.o >In file included from ./solexa/SolexaTools.cc:21: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./solexa/SolexaTools.cc:21: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./util/BaitMap.h:24, > from ./solexa/SolexaTools.cc:27: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = basevector, A = unsigned int]': >./FastaFileset.h:32: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<four_base>, A = four_base]': >./solexa/SolexaTools.cc:104: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<four_base>]': >./FeudalTemplate.h:704: instantiated from 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<four_base>, A = four_base]' >./solexa/SolexaTools.cc:104: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]': >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]' >./solexa/SolexaTools.cc:209: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<four_base>, A = four_base]': >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = serfvec<four_base>, A = four_base]' >./FeudalTemplate.h:728: instantiated from 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<four_base>, A = four_base]' >./solexa/SolexaTools.cc:104: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:22 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./pairwise_aligners/PerfectAligner.cc -o obj/pairwise_aligners/PerfectAligner.o >./util/BaitMap.cc: In member function 'void BaitMap::add(int, longlong, longlong)': >./util/BaitMap.cc:18: warning: format '%lu' expects type 'long unsigned int', but argument 3 has type 'size_t' >./util/BaitMap.cc: In member function 'bool BaitMap::lookup_from_genome(int, longlong, longlong, int*, longlong*, longlong*)': >./util/BaitMap.cc:101: warning: format '%ld' expects type 'long int', but argument 2 has type 'long long int' >./util/BaitMap.cc:101: warning: format '%ld' expects type 'long int', but argument 3 has type 'long long int' >./util/BaitMap.cc: In member function 'bool BaitMap::read(String, bool)': >./util/BaitMap.cc:209: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result >./util/BaitMap.cc: In member function 'bool BaitMap::write(String)': >./util/BaitMap.cc:253: warning: format '%ld' expects type 'long int', but argument 3 has type 'longlong' >./util/BaitMap.cc:253: warning: format '%ld' expects type 'long int', but argument 4 has type 'longlong' >./util/BaitMap.cc:253: warning: format '%ld' expects type 'long int', but argument 5 has type 'longlong' >In file included from ./util/BaitMap.cc:7: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = String, A = char]': >./FeudalTemplate.h:738: instantiated from 'void mastervec<X, A>::WriteRange(const String&, int, int) const [with X = String, A = char]' >./FeudalTemplate.h:746: instantiated from 'void mastervec<X, A>::WriteAll(const String&) const [with X = String, A = char]' >./util/BaitMap.cc:289: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:23 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/AddSuperReads.cc -o obj/paths/AddSuperReads.o >In file included from ./paths/MakeAlignsPathsParallelX.cc:16: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./paths/MakeAlignsPathsParallelX.cc:214:35: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:24 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/AlignAndMerge.cc -o obj/paths/AlignAndMerge.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:24 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/CompletedInsert.cc -o obj/paths/CompletedInsert.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:26 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/ExtendUnipathSeqs.cc -o obj/paths/ExtendUnipathSeqs.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:26 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/FindClosures.cc -o obj/paths/FindClosures.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:27 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/GapSkip.cc -o obj/paths/GapSkip.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:28 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/HyperKmerPath.cc -o obj/paths/HyperKmerPath.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:29 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/HyperKmerPathCleaner.cc -o obj/paths/HyperKmerPathCleaner.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:29 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/ImproperMerge.cc -o obj/paths/ImproperMerge.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:31 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/KmerBaseBroker.cc -o obj/paths/KmerBaseBroker.o >In file included from ./SortKmers.h:20, > from ./SortKmersImpl.h:13, > from ./sort_kmers/SortKmersE.cc:10: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersE.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersE.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersE.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersE.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersE.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersE.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:32 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/KmerPathBreadthSearcher.cc -o obj/paths/KmerPathBreadthSearcher.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:32 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/KmerPathDatabase.cc -o obj/paths/KmerPathDatabase.o >In file included from ./SortKmers.h:20, > from ./SortKmersImpl.h:13, > from ./sort_kmers/SortKmersI.cc:10: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersI.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersI.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersI.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersI.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersI.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:34 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/KmerPathMuxSearcher.cc -o obj/paths/KmerPathMuxSearcher.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:34 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/Mux.cc -o obj/paths/Mux.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:35 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/MuxGraph.cc -o obj/paths/MuxGraph.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:35 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/MuxSearchAgent.cc -o obj/paths/MuxSearchAgent.o >In file included from ./KmerRecord.cc:10: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >In file included from ./KmerRecord.cc:11: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.cc:15:41: warning: invoking macro FOR_ALL_K argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >In file included from ./KmerRecord.cc:12: >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<8>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<8>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<8>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<8>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<12>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<12>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<12>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<12>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<16>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<16>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<16>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<16>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<19>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<19>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<19>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<19>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<20>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<20>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<20>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<20>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<21>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<21>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<21>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<21>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<24>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<24>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<24>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<24>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<26>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<26>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<26>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<26>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<28>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<28>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<28>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<28>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<29>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<29>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<29>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<29>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<32>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<32>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<32>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<32>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<36>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<36>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<36>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<36>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<40>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<40>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<40>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<40>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<48>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<48>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<48>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<48>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<49>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<49>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<49>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<49>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<52>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<52>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<52>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<52>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<64>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<64>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<64>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<64>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<65>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<65>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<65>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<65>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<68>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<68>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<68>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<68>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<80>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<80>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<80>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<80>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<96>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<96>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<96>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<96>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<100>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<100>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<100>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<100>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<192>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<192>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<192>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<192>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<200>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<200>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<200>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<200>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<500>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<500>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<500>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<500>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<1000>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<1000>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<1000>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<1000>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<1200>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<1200>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<1200>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<1200>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<1600>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<1600>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<1600>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<1600>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<2000>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<2000>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<2000>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<2000>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<4000>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<4000>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<4000>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<4000>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = kmer_with_count<10000>]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = kmer_with_count<10000>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = kmer_with_count<10000>]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = kmer_with_count<10000>]' >./KmerRecord.cc:15: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:38 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/MuxSearchPolicy.cc -o obj/paths/MuxSearchPolicy.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:38 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/MuxToPath.cc -o obj/paths/MuxToPath.o >In file included from ./paths/Mux.cc:5: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >In file included from ./paths/Mux.cc:6: >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = Mux]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = Mux]' >./paths/Mux.cc:7: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = Mux]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = Mux]' >./paths/Mux.cc:7: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:38 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/MuxWalkGraph.cc -o obj/paths/MuxWalkGraph.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:39 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/NegativeGapValidator.cc -o obj/paths/NegativeGapValidator.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:39 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/OffsetTracker.cc -o obj/paths/OffsetTracker.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:40 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/PairedPair.cc -o obj/paths/PairedPair.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:41 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/PathEmbedding.cc -o obj/paths/PathEmbedding.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:42 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/PathWalk.cc -o obj/paths/PathWalk.o >In file included from ./paths/CompletedInsert.cc:17: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<SloppyReadPlacement>, A = SloppyReadPlacement]': >./paths/CompletedInsert.cc:83: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = serfvec<SloppyReadPlacement>, A = SloppyReadPlacement]': >./paths/CompletedInsert.cc:83: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/CompletedInsert.cc:17: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = serfvec<SloppyReadPlacement>, A = SloppyReadPlacement]': >./paths/CompletedInsert.cc:83: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/CompletedInsert.cc:17: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<SloppyReadPlacement>, A = SloppyReadPlacement]': >./paths/CompletedInsert.cc:83: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<SloppyReadPlacement>]': >./paths/CompletedInsert.cc:83: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = serfvec<SloppyReadPlacement>, A = SloppyReadPlacement]': >./paths/CompletedInsert.cc:83: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]': >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]' >./FeudalTemplate.h:73: instantiated from 'mastervec<X, A>::mastervec(const String&) [with X = basevector, A = unsigned int]' >./paths/KmerBaseBroker.h:56: instantiated from 'KmerBaseBrokerTemplate<TAG>::KmerBaseBrokerTemplate(String, int, String, String, bool) [with TAG = tagged_rpint]' >./paths/NegativeGapValidator.h:28: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]': >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]' >./FeudalTemplate.h:73: instantiated from 'mastervec<X, A>::mastervec(const String&) [with X = KmerPath, A = KmerPathInterval]' >./paths/KmerBaseBroker.h:58: instantiated from 'KmerBaseBrokerTemplate<TAG>::KmerBaseBrokerTemplate(String, int, String, String, bool) [with TAG = tagged_rpint]' >./paths/NegativeGapValidator.h:28: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = KmerPath]': >./FeudalTemplate.h:469: instantiated from 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]' >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]' >./FeudalTemplate.h:73: instantiated from 'mastervec<X, A>::mastervec(const String&) [with X = KmerPath, A = KmerPathInterval]' >./paths/KmerBaseBroker.h:58: instantiated from 'KmerBaseBrokerTemplate<TAG>::KmerBaseBrokerTemplate(String, int, String, String, bool) [with TAG = tagged_rpint]' >./paths/NegativeGapValidator.h:28: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:42 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/PileReadsOnPath.cc -o obj/paths/PileReadsOnPath.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:42 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/ReadFillDatabase.cc -o obj/paths/ReadFillDatabase.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:44 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/ReadFillRecord.cc -o obj/paths/ReadFillRecord.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:45 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/SimpleWalk.cc -o obj/paths/SimpleWalk.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:46 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/SubsumptionList.cc -o obj/paths/SubsumptionList.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:46 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/Unipath.cc -o obj/paths/Unipath.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:46 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/UnipathSeq.cc -o obj/paths/UnipathSeq.o >In file included from ./paths/ReadFillRecord.cc:4: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >In file included from ./paths/ReadFillRecord.cc:5: >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = ReadFillRecord]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = ReadFillRecord]' >./paths/ReadFillRecord.cc:6: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = ReadFillRecord]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = ReadFillRecord]' >./paths/ReadFillRecord.cc:6: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:47 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/UnipathSeqBuilder.cc -o obj/paths/UnipathSeqBuilder.o >In file included from ./paths/OffsetTracker.cc:13: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<ImplicitOffset>, A = ImplicitOffset]': >./paths/OffsetTracker.h:166: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<ImplicitOffset>, A = ImplicitOffset]': >./paths/OffsetTracker.cc:98: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = serfvec<ImplicitOffset>, A = ImplicitOffset]': >./paths/OffsetTracker.cc:98: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/OffsetTracker.cc:13: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = serfvec<ImplicitOffset>, A = ImplicitOffset]': >./paths/OffsetTracker.cc:98: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/OffsetTracker.cc:13: >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<ImplicitOffset>]': >./paths/OffsetTracker.cc:98: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = serfvec<ImplicitOffset>, A = ImplicitOffset]': >./paths/OffsetTracker.cc:98: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:48 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/VerifyGapLengths.cc -o obj/paths/VerifyGapLengths.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:48 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/WalkPlot.cc -o obj/paths/WalkPlot.o >In file included from ./SortKmers.h:20, > from ./pairwise_aligners/PerfectAligner.cc:13: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:49 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./polymorphism/VAAL0.5.cc -o obj/polymorphism/VAAL0.5.o >In file included from ./SortKmers.h:20, > from ./SortKmersImpl.h:13, > from ./sort_kmers/SortKmersB.cc:10: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersB.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersB.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersB.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersB.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersB.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersB.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersB.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersB.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:50 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./polymorphism/VAALTools.cc -o obj/polymorphism/VAALTools.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:51 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./random/Bernoulli.cc -o obj/random/Bernoulli.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:51 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./random/SequenceEntropy.cc -o obj/random/SequenceEntropy.o >In file included from ./paths/SubsumptionList.cc:6: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<BriefSubsumptionRecord>, A = BriefSubsumptionRecord]': >./paths/SubsumptionList.cc:72: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<BriefSubsumptionRecord>, A = BriefSubsumptionRecord]': >./paths/SubsumptionList.cc:77: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::SparseRead(const String&, const vec<int>&, int, Bool, Bool) [with X = serfvec<BriefSubsumptionRecord>, A = BriefSubsumptionRecord]': >./paths/SubsumptionList.cc:77: instantiated from here >./FeudalTemplate.h:617: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/SubsumptionList.cc:6: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = serfvec<BriefSubsumptionRecord>, A = BriefSubsumptionRecord]': >./paths/SubsumptionList.cc:77: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/SubsumptionList.cc:6: >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<BriefSubsumptionRecord>]': >./paths/SubsumptionList.cc:77: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::MapAll(const String&) [with X = serfvec<BriefSubsumptionRecord>, A = BriefSubsumptionRecord]': >./paths/SubsumptionList.cc:77: instantiated from here >./FeudalTemplate.h:758: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:51 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./solexa/SolexaMetrics.cc -o obj/solexa/SolexaMetrics.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:52 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./polymorphism/VAAL1.cc -o obj/polymorphism/VAAL1.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:52 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./polymorphism/VAAL1.5.cc -o obj/polymorphism/VAAL1.5.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:52 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./BinaryIO.cc -o obj/BinaryIO.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:53 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./ReadLocation.cc -o obj/ReadLocation.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:53 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./graph/DigraphPaths.cc -o obj/graph/DigraphPaths.o >./solexa/SolexaMetrics.cc: In member function 'void solexa_metric_db::WriteMetrics(const filename_t&, Bool) const': >./solexa/SolexaMetrics.cc:165: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:54 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./graph/DotUtils.cc -o obj/graph/DotUtils.o >In file included from ./SortKmers.h:20, > from ./SortKmersImpl.h:13, > from ./sort_kmers/SortKmersC.cc:10: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersC.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersC.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersC.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersC.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersC.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersC.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersC.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersC.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:55 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/AlignHyperKmerPath.cc -o obj/paths/AlignHyperKmerPath.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:55 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/AlignPairsToHyper.cc -o obj/paths/AlignPairsToHyper.o >In file included from ./SortKmers.h:20, > from ./SortKmersImpl.h:13, > from ./sort_kmers/SortKmersA.cc:10: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersA.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersA.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersA.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersA.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersA.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersA.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersA.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersA.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersA.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./sort_kmers/SortKmersA.cc:14:52: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:55 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/AlignSeqsToHyper.cc -o obj/paths/AlignSeqsToHyper.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:56 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/EvalUtils.cc -o obj/paths/EvalUtils.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:57 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/ReadsToPathsCore.cc -o obj/paths/ReadsToPathsCore.o >In file included from ./polymorphism/VAAL1.5.cc:30: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./polymorphism/VAAL1.5.cc:30: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:15:57 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./paths/SeqOnHyper.cc -o obj/paths/SeqOnHyper.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:16:00 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./polymorphism/VAAL2.cc -o obj/polymorphism/VAAL2.o >In file included from ./paths/Unipath.cc:19: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >In file included from ./paths/Unipath.cc:17: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]': >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]' >./FeudalTemplate.h:73: instantiated from 'mastervec<X, A>::mastervec(const String&) [with X = basevector, A = unsigned int]' >./paths/KmerBaseBroker.h:56: instantiated from 'KmerBaseBrokerTemplate<TAG>::KmerBaseBrokerTemplate(String, int, String, String, bool) [with TAG = tagged_rpint]' >./paths/NegativeGapValidator.h:28: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]': >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]' >./FeudalTemplate.h:73: instantiated from 'mastervec<X, A>::mastervec(const String&) [with X = KmerPath, A = KmerPathInterval]' >./paths/KmerBaseBroker.h:58: instantiated from 'KmerBaseBrokerTemplate<TAG>::KmerBaseBrokerTemplate(String, int, String, String, bool) [with TAG = tagged_rpint]' >./paths/NegativeGapValidator.h:28: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/Unipath.cc:17: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = KmerPath, A = KmerPathInterval]': >./FeudalTemplate.h:738: instantiated from 'void mastervec<X, A>::WriteRange(const String&, int, int) const [with X = KmerPath, A = KmerPathInterval]' >./FeudalTemplate.h:746: instantiated from 'void mastervec<X, A>::WriteAll(const String&) const [with X = KmerPath, A = KmerPathInterval]' >./paths/Unipath.cc:477: instantiated from 'void Unipath(const vecKmerPath&, const vecKmerPath&, const vec<U>&, vecKmerPath&, vec<U>&, Bool, const String&, bool) [with TAGGED_RPINT = tagged_rpint]' >./paths/Unipath.cc:593: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/Unipath.cc:17: >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = KmerPath]': >./FeudalTemplate.h:469: instantiated from 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]' >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]' >./FeudalTemplate.h:73: instantiated from 'mastervec<X, A>::mastervec(const String&) [with X = KmerPath, A = KmerPathInterval]' >./paths/KmerBaseBroker.h:58: instantiated from 'KmerBaseBrokerTemplate<TAG>::KmerBaseBrokerTemplate(String, int, String, String, bool) [with TAG = tagged_rpint]' >./paths/NegativeGapValidator.h:28: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:16:01 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./system/TimeUtils.cc -o obj/system/TimeUtils.o >In file included from ./polymorphism/VAAL0.5.cc:35: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./polymorphism/VAAL0.5.cc:35: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:16:01 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./polymorphism/VAAL3.cc -o obj/polymorphism/VAAL3.o >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:16:02 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./polymorphism/VAALCompareCompound.cc -o obj/polymorphism/VAALCompareCompound.o >In file included from ./ReadLocation.cc:22: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >./ReadLocation.cc: In function 'void ReadsToLocations(const String&, const vec<int>&, vec<vec<read_location> >&)': >./ReadLocation.cc:75: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./ReadLocation.cc:79: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./ReadLocation.cc:83: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./ReadLocation.cc:85: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./ReadLocation.cc:90: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./CoreTools.h:16, > from ./ReadLocation.cc:19: >./Vec.h: In function 'void BinaryReadSubset0(const String&, const vec<int>&, vec<U>&) [with T = unsigned char]': >./ReadLocation.cc:512: instantiated from here >./Vec.h:1328: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./ReadLocation.cc:23: >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = read_location_short]': >./VecTemplate.h:238: instantiated from 'void BinaryReadSubset2(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = read_location_short]' >./ReadLocation.cc:597: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = read_location_short]': >./VecTemplate.h:274: instantiated from 'void BinaryReadRange2(const String&, longlong, longlong, vec<U>&, bool) [with T = read_location_short]' >./ReadLocation.cc:597: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:16:03 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./polymorphism/VAAL4.cc -o obj/polymorphism/VAAL4.o >In file included from ./polymorphism/VAALTools.cc:22: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >In file included from ./solexa/SolexaTools.h:19, > from ./polymorphism/VAALTools.cc:30: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./solexa/SolexaTools.h:19, > from ./polymorphism/VAALTools.cc:30: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./polymorphism/VAALTools.cc:23: >./VecTemplate.h: In function 'void BinaryReadSubset2Or3(const String&, const vec<int>&, vec<U>&, Bool, int) [with T = placement]': >./VecTemplate.h:245: instantiated from 'void BinaryReadSubset3(const String&, const vec<int>&, vec<U>&, Bool, bool) [with T = placement]' >./polymorphism/VAALTools.cc:206: instantiated from here >./VecTemplate.h:229: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./VecTemplate.h: In function 'void BinaryReadRange2Or3(const String&, longlong, longlong, vec<U>&, int) [with T = placement]': >./VecTemplate.h:281: instantiated from 'void BinaryReadRange3(const String&, longlong, longlong, vec<U>&, bool) [with T = placement]' >./polymorphism/VAALTools.cc:206: instantiated from here >./VecTemplate.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:16:03 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./polymorphism/VAAL.cc -o obj/polymorphism/VAAL.o >In file included from ./paths/ReadsToPathsCoreX.cc:21: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >i686-pc-linux-gnu-g++ -Wextra -Wall -Wno-unused -Wno-deprecated -ansi -pedantic -Wno-long-long -Wctor-dtor-privacy -Wsign-promo -Woverloaded-virtual -Wendif-labels -Wno-empty-body -Wno-parentheses -Wno-array-bounds -O3 -ggdb3 -DMAKE_DATE='"Thu Nov 26 18:16:04 CET 2009"' -DMAKE_OS_RELEASE='"2.6.32-rc8"' -DMAKE_RELEASE='"3.0"' -DNEW_MAKEFILE -imacros system/BigFileDefines.h -ftemplate-depth-50 -fno-strict-aliasing -mieee-fp -fno-nonansi-builtins -iquote . -DHAVE_PTHREADS -I/usr/include -c ./polymorphism/VAALrun.cc -o obj/polymorphism/VAALrun.o >/bin/rm -f obj/lib_Fastb_temp.a >ar -qc obj/lib_Fastb_temp.a obj/Basevector.o obj/Bitvector.o obj/FastIfstream.o obj/FetchReads.o obj/FetchReadsAmb.o obj/Feudal.o obj/FeudalMimic.o obj/FeudalReadPart.o obj/MemberOf.o obj/ParseRange.o obj/ParseSet.o obj/Qualvector.o obj/String.o obj/TokenizeString.o obj/Vec.o obj/VecString.o obj/charTranslations.o obj/math/Arith.o obj/math/Functions.o obj/math/HoInterval.o obj/random/Random.o obj/system/Assert.o obj/system/Crash.o obj/system/Exit.o obj/system/MemTracker.o obj/system/ParsedArgs.o obj/system/ProcBuf.o obj/system/RunTime.o obj/system/System.o obj/system/TraceVal.o obj/system/Types.o obj/util/Fastb.o obj/util/Kronos.o >bin/checkLock bin/Fastb >i686-pc-linux-gnu-g++ -ggdb3 -o bin/Fastb obj/util/Fastb.o -L. -L. -Lobj -L/usr/lib -l_Fastb_temp >In file included from ./paths/AlignSeqsToHyper.h:18, > from ./paths/AlignPairsToHyper.cc:29: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/AlignSeqsToHyper.h:18, > from ./paths/AlignPairsToHyper.cc:29: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >/bin/rm -f obj/lib_ImperfectLookupTable_temp.a >ar -qc obj/lib_ImperfectLookupTable_temp.a obj/Alignment.o obj/Basevector.o obj/BasevectorTools.o obj/Bitvector.o obj/BlockAlign.o obj/Charvector.o obj/CompressedSequence.o obj/FastIfstream.o obj/FastaConverter.o obj/FastaFileset.o obj/FastaFilestream.o obj/FastaFilestreamPreview.o obj/FastaNameParser.o obj/FastaVerifier.o obj/Feudal.o obj/FeudalMimic.o obj/FeudalReadPart.o obj/IndexedAlignmentPlusVector.o obj/MemberOf.o obj/PackAlign.o obj/ParseRange.o obj/ParseSet.o obj/PrintAlignment.o obj/Qualvector.o obj/ReadPairing.o obj/ScoreAlignment.o obj/SeqInterval.o obj/String.o obj/TokenizeString.o obj/Vec.o obj/VecAlignmentPlus.o obj/VecString.o obj/charTranslations.o obj/lookup/AlignCollector.o obj/lookup/Hit.o obj/lookup/HitReceiver.o obj/lookup/ImperfectLookup.o obj/lookup/ImperfectLookupTable.o obj/lookup/LookAlign.o obj/lookup/LookupTable.o obj/lookup/PerfectCount.o obj/lookup/PerfectLookup.o obj/math/Arith.o obj/math/Functions.o obj/math/HoInterval.o obj/pairwise_aligners/Mutmer.o obj/pairwise_aligners/SmithWatBandedA.o obj/random/Random.o obj/solid/Solid.o obj/system/Assert.o obj/system/Crash.o obj/system/Exit.o obj/system/MemTracker.o obj/system/ParsedArgs.o obj/system/ProcBuf.o obj/system/RunTime.o obj/system/System.o obj/system/TraceVal.o obj/system/Types.o obj/util/Kronos.o >bin/checkLock bin/ImperfectLookupTable >i686-pc-linux-gnu-g++ -ggdb3 -o bin/ImperfectLookupTable obj/lookup/ImperfectLookupTable.o -L. -L. -Lobj -L/usr/lib -l_ImperfectLookupTable_temp >/bin/rm obj/lib_Fastb_temp.a >/bin/rm -f obj/lib_MakeLookupTable_temp.a >ar -qc obj/lib_MakeLookupTable_temp.a obj/Alignment.o obj/Basevector.o obj/Bitvector.o obj/BlockAlign.o obj/Charvector.o obj/CompressedSequence.o obj/FastIfstream.o obj/FastaConverter.o obj/FastaFileset.o obj/FastaFilestream.o obj/FastaFilestreamPreview.o obj/FastaNameParser.o obj/FastaVerifier.o obj/FetchReads.o obj/FetchReadsAmb.o obj/Feudal.o obj/FeudalMimic.o obj/FeudalReadPart.o obj/IndexedAlignmentPlusVector.o obj/MemberOf.o obj/PackAlign.o obj/ParseRange.o obj/ParseSet.o obj/PrintAlignment.o obj/Qualvector.o obj/ReadPairing.o obj/ScoreAlignment.o obj/SeqInterval.o obj/String.o obj/TokenizeString.o obj/Vec.o obj/VecAlignmentPlus.o obj/VecString.o obj/charTranslations.o obj/lookup/Hit.o obj/lookup/LookAlign.o obj/lookup/LookupTable.o obj/lookup/LookupTableBuilder.o obj/lookup/MakeLookupTable.o obj/lookup/PerfectCount.o obj/lookup/PerfectLookup.o obj/math/Arith.o obj/math/Functions.o obj/math/HoInterval.o obj/pairwise_aligners/Mutmer.o obj/random/Random.o obj/system/Assert.o obj/system/Crash.o obj/system/Exit.o obj/system/MemTracker.o obj/system/ParsedArgs.o obj/system/ProcBuf.o obj/system/RunTime.o obj/system/System.o obj/system/TraceVal.o obj/system/Types.o obj/util/Kronos.o >bin/checkLock bin/MakeLookupTable >i686-pc-linux-gnu-g++ -ggdb3 -o bin/MakeLookupTable obj/lookup/MakeLookupTable.o -L. -L. -Lobj -L/usr/lib -l_MakeLookupTable_temp >/bin/rm -f obj/lib_Qualb_temp.a >ar -qc obj/lib_Qualb_temp.a obj/FastIfstream.o obj/Feudal.o obj/FeudalReadPart.o obj/MemberOf.o obj/ParseRange.o obj/ParseSet.o obj/Qualvector.o obj/String.o obj/TokenizeString.o obj/Vec.o obj/VecString.o obj/math/Arith.o obj/math/Functions.o obj/system/Assert.o obj/system/Exit.o obj/system/MemTracker.o obj/system/ParsedArgs.o obj/system/ProcBuf.o obj/system/RunTime.o obj/system/System.o obj/system/TraceVal.o obj/system/Types.o obj/util/Kronos.o obj/util/Qualb.o >bin/checkLock bin/Qualb >i686-pc-linux-gnu-g++ -ggdb3 -o bin/Qualb obj/util/Qualb.o -L. -L. -Lobj -L/usr/lib -l_Qualb_temp >In file included from ./solexa/SolexaTools.h:19, > from ./polymorphism/VAALrun.cc:26: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./solexa/SolexaTools.h:19, > from ./polymorphism/VAALrun.cc:26: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >/bin/rm -f obj/lib_QueryLookupTable_temp.a >ar -qc obj/lib_QueryLookupTable_temp.a obj/Alignment.o obj/Basevector.o obj/Bitvector.o obj/BlockAlign.o obj/Charvector.o obj/CompressedSequence.o obj/FastIfstream.o obj/FastaConverter.o obj/FastaFilestream.o obj/FastaFilestreamPreview.o obj/FastaNameParser.o obj/FastaVerifier.o obj/FetchReads.o obj/Feudal.o obj/FeudalMimic.o obj/FeudalReadPart.o obj/IndexedAlignmentPlusVector.o obj/MemberOf.o obj/PackAlign.o obj/ParseRange.o obj/ParseSet.o obj/PrintAlignment.o obj/Qualvector.o obj/ReadPairing.o obj/ScoreAlignment.o obj/SeqInterval.o obj/String.o obj/TokenizeString.o obj/Vec.o obj/VecAlignmentPlus.o obj/VecString.o obj/charTranslations.o obj/lookup/FlowAlignSummary.o obj/lookup/Hit.o obj/lookup/LookAlign.o obj/lookup/LookupTable.o obj/lookup/PerfectCount.o obj/lookup/PerfectLookup.o obj/lookup/QueryLookupTable.o obj/lookup/QueryLookupTableCore.o obj/math/Arith.o obj/math/Functions.o obj/math/HoInterval.o obj/pairwise_aligners/AlignFromMutmers.o obj/pairwise_aligners/AlignFromMutmersAndSW.o obj/pairwise_aligners/MakeAlignsMethod.o obj/pairwise_aligners/Mutmer.o obj/pairwise_aligners/SmithWatAffine.o obj/pairwise_aligners/SmithWatBandedA.o obj/pairwise_aligners/SmithWatFree.o obj/random/Random.o obj/system/Assert.o obj/system/Crash.o obj/system/Exit.o obj/system/MemTracker.o obj/system/ParsedArgs.o obj/system/ProcBuf.o obj/system/RunTime.o obj/system/System.o obj/system/TraceVal.o obj/system/Types.o obj/util/Kronos.o >bin/checkLock bin/QueryLookupTable >i686-pc-linux-gnu-g++ -ggdb3 -o bin/QueryLookupTable obj/lookup/QueryLookupTable.o -L. -L. -Lobj -L/usr/lib -l_QueryLookupTable_temp >/bin/rm obj/lib_MakeLookupTable_temp.a >/bin/rm -f obj/lib_ShortQueryLookup_temp.a >ar -qc obj/lib_ShortQueryLookup_temp.a obj/Alignment.o obj/Basevector.o obj/BasevectorTools.o obj/Bitvector.o obj/BlockAlign.o obj/Charvector.o obj/CompressedSequence.o obj/FastIfstream.o obj/FastaConverter.o obj/FastaFileset.o obj/FastaFilestream.o obj/FastaFilestreamPreview.o obj/FastaNameParser.o obj/FastaVerifier.o obj/Feudal.o obj/FeudalMimic.o obj/FeudalReadPart.o obj/IndexedAlignmentPlusVector.o obj/MemberOf.o obj/PackAlign.o obj/ParseRange.o obj/ParseSet.o obj/PrintAlignment.o obj/Qualvector.o obj/ReadPairing.o obj/ScoreAlignment.o obj/SeqInterval.o obj/String.o obj/TokenizeString.o obj/Vec.o obj/VecAlignmentPlus.o obj/VecString.o obj/charTranslations.o obj/lookup/AlignCollector.o obj/lookup/Hit.o obj/lookup/HitReceiver.o obj/lookup/ImperfectLookup.o obj/lookup/LookAlign.o obj/lookup/LookupTable.o obj/lookup/PerfectCount.o obj/lookup/PerfectLookup.o obj/lookup/ShortQueryLookup.o obj/math/Arith.o obj/math/Functions.o obj/math/HoInterval.o obj/pairwise_aligners/Mutmer.o obj/pairwise_aligners/SmithWatBandedA.o obj/random/Random.o obj/solid/Solid.o obj/system/Assert.o obj/system/Crash.o obj/system/Exit.o obj/system/MemTracker.o obj/system/ParsedArgs.o obj/system/ProcBuf.o obj/system/RunTime.o obj/system/System.o obj/system/TraceVal.o obj/system/Types.o obj/util/Kronos.o >/bin/rm obj/lib_ImperfectLookupTable_temp.a >/bin/rm -f obj/lib_TruePoly_temp.a >/bin/rm obj/lib_Qualb_temp.a >ar -qc obj/lib_TruePoly_temp.a obj/Alignment.o obj/Basevector.o obj/BasevectorTools.o obj/Bitvector.o obj/FastIfstream.o obj/FetchReads.o obj/Feudal.o obj/FeudalFileWriter.o obj/FeudalMimic.o obj/FeudalReadPart.o obj/HashSimple.o obj/IndexedAlignmentPlusVector.o obj/KmerRecord.o obj/KmerShape.o obj/MemberOf.o obj/PackAlign.o obj/ParseRange.o obj/ParseSet.o obj/PrintAlignment.o obj/Qualvector.o obj/SortKmers.o obj/String.o obj/TokenizeString.o obj/Vec.o obj/VecAlignmentPlus.o obj/VecString.o obj/charTranslations.o obj/math/Arith.o obj/math/Functions.o obj/math/HoInterval.o obj/pairwise_aligners/MaxMutmerFromMer.o obj/pairwise_aligners/Mutmer.o obj/pairwise_aligners/SmithWatFree.o obj/paths/KmerPath.o obj/paths/KmerPathInterval.o obj/paths/MakeAlignsPathsParallelX.o obj/paths/ReadsToPathsCoreX.o obj/polymorphism/TruePoly.o obj/polymorphism/TruePolyCore.o obj/random/Random.o obj/sort_kmers/SortKmersA.o obj/sort_kmers/SortKmersB.o obj/sort_kmers/SortKmersC.o obj/sort_kmers/SortKmersD.o obj/sort_kmers/SortKmersE.o obj/sort_kmers/SortKmersF.o obj/sort_kmers/SortKmersG.o obj/sort_kmers/SortKmersH.o obj/sort_kmers/SortKmersI.o obj/system/Assert.o obj/system/Crash.o obj/system/Exit.o obj/system/MemTracker.o obj/system/ParsedArgs.o obj/system/ProcBuf.o obj/system/RunTime.o obj/system/System.o obj/system/Threads.o obj/system/TraceVal.o obj/system/Types.o obj/system/WorklistUtils.o obj/util/Kronos.o >/bin/rm -f obj/lib_VAAL0_temp.a >bin/checkLock bin/ShortQueryLookup >ar -qc obj/lib_VAAL0_temp.a obj/Alignment.o obj/Basevector.o obj/Bitvector.o obj/BlockAlign.o obj/Charvector.o obj/CompressedSequence.o obj/FastIfstream.o obj/FastaConverter.o obj/FastaFileset.o obj/FastaFilestream.o obj/FastaFilestreamPreview.o obj/FastaNameParser.o obj/FastaVerifier.o obj/FetchReads.o obj/Feudal.o obj/FeudalMimic.o obj/FeudalReadPart.o obj/IndexedAlignmentPlusVector.o obj/MemberOf.o obj/PackAlign.o obj/ParseRange.o obj/ParseSet.o obj/PrintAlignment.o obj/Qualvector.o obj/ReadPairing.o obj/ScoreAlignment.o obj/SeqInterval.o obj/String.o obj/TokenizeString.o obj/Vec.o obj/VecAlignmentPlus.o obj/VecString.o obj/charTranslations.o obj/lookup/FlowAlignSummary.o obj/lookup/LookAlign.o obj/lookup/LookAlignFinder.o obj/lookup/LookAlignSort.o obj/math/Arith.o obj/math/Functions.o obj/math/HoInterval.o obj/math/Matrix.o obj/math/Permutation.o obj/micro/MicroKillVec.o obj/pairwise_aligners/Mutmer.o obj/polymorphism/VAAL0.o obj/random/Random.o obj/random/Shuffle.o obj/solexa/FourBase.o obj/solexa/FourBase2.o obj/solexa/SolexaTools.o obj/system/Assert.o obj/system/Crash.o obj/system/Exit.o obj/system/MemTracker.o obj/system/ParsedArgs.o obj/system/ProcBuf.o obj/system/RunTime.o obj/system/StdioWrapper.o obj/system/System.o obj/system/TraceVal.o obj/system/Types.o obj/util/BaitMap.o obj/util/Kronos.o >i686-pc-linux-gnu-g++ -ggdb3 -o bin/ShortQueryLookup obj/lookup/ShortQueryLookup.o -L. -L. -Lobj -L/usr/lib -l_ShortQueryLookup_temp >bin/checkLock bin/VAAL0 >i686-pc-linux-gnu-g++ -ggdb3 -o bin/VAAL0 obj/polymorphism/VAAL0.o -L. -L. -Lobj -L/usr/lib -l_VAAL0_temp >/bin/rm obj/lib_QueryLookupTable_temp.a >/bin/rm -f obj/lib_VAALCompareCompound_temp.a >ar -qc obj/lib_VAALCompareCompound_temp.a obj/Basevector.o obj/Feudal.o obj/FeudalReadPart.o obj/MemberOf.o obj/ParseRange.o obj/ParseSet.o obj/String.o obj/TokenizeString.o obj/Vec.o obj/VecString.o obj/charTranslations.o obj/math/Arith.o obj/math/Functions.o obj/math/HoInterval.o obj/polymorphism/VAALCompareCompound.o obj/random/Random.o obj/system/Assert.o obj/system/Crash.o obj/system/Exit.o obj/system/MemTracker.o obj/system/ParsedArgs.o obj/system/ProcBuf.o obj/system/RunTime.o obj/system/System.o obj/system/TraceVal.o obj/system/Types.o obj/util/Kronos.o >bin/checkLock bin/TruePoly >i686-pc-linux-gnu-g++ -ggdb3 -o bin/TruePoly obj/polymorphism/TruePoly.o -L. -L. -Lobj -L/usr/lib -lpthread -l_TruePoly_temp >bin/checkLock bin/VAALCompareCompound >i686-pc-linux-gnu-g++ -ggdb3 -o bin/VAALCompareCompound obj/polymorphism/VAALCompareCompound.o -L. -L. -Lobj -L/usr/lib -l_VAALCompareCompound_temp >/bin/rm obj/lib_VAAL0_temp.a >/bin/rm obj/lib_ShortQueryLookup_temp.a >/bin/rm obj/lib_VAALCompareCompound_temp.a >In file included from ./solexa/SolexaTools.h:19, > from ./polymorphism/VAAL.cc:41: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./solexa/SolexaTools.h:19, > from ./polymorphism/VAAL.cc:41: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/AlignSeqsToHyper.h:18, > from ./paths/AlignSeqsToHyper.cc:15: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/AlignSeqsToHyper.h:18, > from ./paths/AlignSeqsToHyper.cc:15: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >/bin/rm obj/lib_TruePoly_temp.a >In file included from ./polymorphism/VAAL1.cc:53: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./polymorphism/VAAL1.cc:53: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./polymorphism/VAAL1.cc:50: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = basevector, A = unsigned int]': >./FeudalTemplate.h:738: instantiated from 'void mastervec<X, A>::WriteRange(const String&, int, int) const [with X = basevector, A = unsigned int]' >./polymorphism/VAAL1.cc:274: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = KmerPath, A = KmerPathInterval]': >./FeudalTemplate.h:738: instantiated from 'void mastervec<X, A>::WriteRange(const String&, int, int) const [with X = KmerPath, A = KmerPathInterval]' >./FeudalTemplate.h:746: instantiated from 'void mastervec<X, A>::WriteAll(const String&) const [with X = KmerPath, A = KmerPathInterval]' >./polymorphism/VAAL1.cc:190: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = serfvec<placement_mark>, A = placement_mark]': >./FeudalTemplate.h:738: instantiated from 'void mastervec<X, A>::WriteRange(const String&, int, int) const [with X = serfvec<placement_mark>, A = placement_mark]' >./FeudalTemplate.h:746: instantiated from 'void mastervec<X, A>::WriteAll(const String&) const [with X = serfvec<placement_mark>, A = placement_mark]' >./polymorphism/VAAL1.cc:426: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./polymorphism/VAAL1.cc:50: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]': >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]' >./FeudalTemplate.h:73: instantiated from 'mastervec<X, A>::mastervec(const String&) [with X = basevector, A = unsigned int]' >./paths/KmerBaseBroker.h:56: instantiated from 'KmerBaseBrokerTemplate<TAG>::KmerBaseBrokerTemplate(String, int, String, String, bool) [with TAG = tagged_rpint]' >./paths/NegativeGapValidator.h:28: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]': >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]' >./FeudalTemplate.h:73: instantiated from 'mastervec<X, A>::mastervec(const String&) [with X = KmerPath, A = KmerPathInterval]' >./paths/KmerBaseBroker.h:58: instantiated from 'KmerBaseBrokerTemplate<TAG>::KmerBaseBrokerTemplate(String, int, String, String, bool) [with TAG = tagged_rpint]' >./paths/NegativeGapValidator.h:28: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = KmerPath]': >./FeudalTemplate.h:469: instantiated from 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]' >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]' >./FeudalTemplate.h:73: instantiated from 'mastervec<X, A>::mastervec(const String&) [with X = KmerPath, A = KmerPathInterval]' >./paths/KmerBaseBroker.h:58: instantiated from 'KmerBaseBrokerTemplate<TAG>::KmerBaseBrokerTemplate(String, int, String, String, bool) [with TAG = tagged_rpint]' >./paths/NegativeGapValidator.h:28: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./math/HoInterval.h: In function 'int main(int, char**)': >./math/HoInterval.h:24: warning: assuming signed overflow does not occur when assuming that (X + c) < X is always false >In file included from ./solexa/SolexaTools.h:19, > from ./polymorphism/VAAL4.cc:26: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./solexa/SolexaTools.h:19, > from ./polymorphism/VAAL4.cc:26: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/EvalUtils.cc:19: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/EvalUtils.cc:19: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >/bin/rm -f obj/lib_VAAL0.5_temp.a >/bin/rm -f obj/lib_VAAL1_temp.a >/bin/rm -f obj/lib_VAAL1.5_temp.a >ar -qc obj/lib_VAAL0.5_temp.a obj/Alignment.o obj/Basevector.o obj/BasevectorTools.o obj/Bitvector.o obj/BlockAlign.o obj/Charvector.o obj/CompressedSequence.o obj/Equiv.o obj/FastIfstream.o obj/FastaConverter.o obj/FastaFileset.o obj/FastaFilestream.o obj/FastaFilestreamPreview.o obj/FastaNameParser.o obj/FastaVerifier.o obj/FetchReads.o obj/Feudal.o obj/FeudalFileWriter.o obj/FeudalMimic.o obj/FeudalReadPart.o obj/HashSimple.o obj/IndexedAlignmentPlusVector.o obj/KmerRecord.o obj/KmerShape.o obj/MemberOf.o obj/PackAlign.o obj/PairsHandler.o obj/ParseRange.o obj/ParseSet.o obj/PrintAlignment.o obj/Qualvector.o obj/ReadPairing.o obj/ScoreAlignment.o obj/SeqInterval.o obj/SortKmers.o obj/String.o obj/TokenizeString.o obj/Vec.o obj/VecAlignmentPlus.o obj/VecOverlap.o obj/VecString.o obj/charTranslations.o obj/graph/Digraph.o obj/graphics/BasicGraphics.o obj/graphics/Color.o obj/lookup/FlowAlignSummary.o obj/lookup/LookAlign.o obj/lookup/LookAlignFinder.o obj/lookup/LookAlignSort.o obj/math/Arith.o obj/math/Functions.o obj/math/HoInterval.o obj/math/Matrix.o obj/math/Permutation.o obj/pairwise_aligners/MatchList.o obj/pairwise_aligners/MaxMutmerFromMer.o obj/pairwise_aligners/Mutmer.o obj/pairwise_aligners/PerfectAligner.o obj/pairwise_aligners/SmithWatBandedA.o obj/pairwise_aligners/SmithWatFree.o obj/paths/AddSuperReads.o obj/paths/AlignAndMerge.o obj/paths/CompletedInsert.o obj/paths/ExtendUnipathSeqs.o obj/paths/FindClosures.o obj/paths/GapSkip.o obj/paths/HyperKmerPath.o obj/paths/HyperKmerPathCleaner.o obj/paths/ImproperMerge.o obj/paths/KmerBaseBroker.o obj/paths/KmerPath.o obj/paths/KmerPathBreadthSearcher.o obj/paths/KmerPathDatabase.o obj/paths/KmerPathInterval.o obj/paths/KmerPathMuxSearcher.o obj/paths/MakeAlignsPathsParallelX.o obj/paths/Mux.o obj/paths/MuxGraph.o obj/paths/MuxSearchAgent.o obj/paths/MuxSearchPolicy.o obj/paths/MuxToPath.o obj/paths/MuxWalkGraph.o obj/paths/NegativeGapValidator.o obj/paths/OffsetTracker.o obj/paths/PairedPair.o obj/paths/PathEmbedding.o obj/paths/PathWalk.o obj/paths/PileReadsOnPath.o obj/paths/ReadFillDatabase.o obj/paths/ReadFillRecord.o obj/paths/ReadsToPathsCoreX.o obj/paths/SimpleWalk.o obj/paths/SubsumptionList.o obj/paths/Unipath.o obj/paths/UnipathSeq.o obj/paths/UnipathSeqBuilder.o obj/paths/VerifyGapLengths.o obj/paths/WalkPlot.o obj/polymorphism/VAAL0.5.o obj/polymorphism/VAALTools.o obj/random/Bernoulli.o obj/random/Random.o obj/random/SequenceEntropy.o obj/random/Shuffle.o obj/solexa/FourBase.o obj/solexa/FourBase2.o obj/solexa/SolexaMetrics.o obj/solexa/SolexaTools.o obj/sort_kmers/SortKmersA.o obj/sort_kmers/SortKmersB.o obj/sort_kmers/SortKmersC.o obj/sort_kmers/SortKmersD.o obj/sort_kmers/SortKmersE.o obj/sort_kmers/SortKmersF.o obj/sort_kmers/SortKmersG.o obj/sort_kmers/SortKmersH.o obj/sort_kmers/SortKmersI.o obj/system/Assert.o obj/system/Crash.o obj/system/Exit.o obj/system/MemTracker.o obj/system/ParsedArgs.o obj/system/ProcBuf.o obj/system/RunTime.o obj/system/StdioWrapper.o obj/system/System.o obj/system/Threads.o obj/system/TraceVal.o obj/system/Types.o obj/system/WorklistUtils.o obj/util/BaitMap.o obj/util/Kronos.o >/bin/rm -f obj/lib_VAAL4_temp.a >ar -qc obj/lib_VAAL1.5_temp.a obj/Alignment.o obj/Basevector.o obj/BasevectorTools.o obj/Bitvector.o obj/BlockAlign.o obj/Charvector.o obj/CompressedSequence.o obj/Equiv.o obj/FastIfstream.o obj/FastaConverter.o obj/FastaFileset.o obj/FastaFilestream.o obj/FastaFilestreamPreview.o obj/FastaNameParser.o obj/FastaVerifier.o obj/FetchReads.o obj/Feudal.o obj/FeudalFileWriter.o obj/FeudalMimic.o obj/FeudalReadPart.o obj/HashSimple.o obj/IndexedAlignmentPlusVector.o obj/KmerRecord.o obj/KmerShape.o obj/MemberOf.o obj/PackAlign.o obj/PairsHandler.o obj/ParseRange.o obj/ParseSet.o obj/PrintAlignment.o obj/Qualvector.o obj/ReadPairing.o obj/ScoreAlignment.o obj/SeqInterval.o obj/SortKmers.o obj/String.o obj/TokenizeString.o obj/Vec.o obj/VecAlignmentPlus.o obj/VecOverlap.o obj/VecString.o obj/charTranslations.o obj/graph/Digraph.o obj/graphics/BasicGraphics.o obj/graphics/Color.o obj/lookup/FlowAlignSummary.o obj/lookup/Hit.o obj/lookup/LookAlign.o obj/lookup/LookAlignFinder.o obj/lookup/LookAlignSort.o obj/lookup/LookupTable.o obj/lookup/PerfectCount.o obj/lookup/PerfectLookup.o obj/math/Arith.o obj/math/Functions.o obj/math/HoInterval.o obj/math/Matrix.o obj/math/Permutation.o obj/pairwise_aligners/MatchList.o obj/pairwise_aligners/MaxMutmerFromMer.o obj/pairwise_aligners/Mutmer.o obj/pairwise_aligners/PerfectAligner.o obj/pairwise_aligners/SmithWatBandedA.o obj/paths/AddSuperReads.o obj/paths/AlignAndMerge.o obj/paths/CompletedInsert.o obj/paths/ExtendUnipathSeqs.o obj/paths/FindClosures.o obj/paths/GapSkip.o obj/paths/HyperKmerPath.o obj/paths/HyperKmerPathCleaner.o obj/paths/ImproperMerge.o obj/paths/KmerBaseBroker.o obj/paths/KmerPath.o obj/paths/KmerPathBreadthSearcher.o obj/paths/KmerPathDatabase.o obj/paths/KmerPathInterval.o obj/paths/KmerPathMuxSearcher.o obj/paths/MakeAlignsPathsParallelX.o obj/paths/Mux.o obj/paths/MuxGraph.o obj/paths/MuxSearchAgent.o obj/paths/MuxSearchPolicy.o obj/paths/MuxToPath.o obj/paths/MuxWalkGraph.o obj/paths/NegativeGapValidator.o obj/paths/OffsetTracker.o obj/paths/PairedPair.o obj/paths/PathEmbedding.o obj/paths/PathWalk.o obj/paths/PileReadsOnPath.o obj/paths/ReadFillDatabase.o obj/paths/ReadFillRecord.o obj/paths/ReadsToPathsCoreX.o obj/paths/SimpleWalk.o obj/paths/SubsumptionList.o obj/paths/Unipath.o obj/paths/UnipathSeq.o obj/paths/UnipathSeqBuilder.o obj/paths/VerifyGapLengths.o obj/paths/WalkPlot.o obj/polymorphism/VAAL1.5.o obj/polymorphism/VAALTools.o obj/random/Bernoulli.o obj/random/Random.o obj/random/SequenceEntropy.o obj/random/Shuffle.o obj/solexa/FourBase.o obj/solexa/FourBase2.o obj/solexa/SolexaTools.o obj/sort_kmers/SortKmersA.o obj/sort_kmers/SortKmersB.o obj/sort_kmers/SortKmersC.o obj/sort_kmers/SortKmersD.o obj/sort_kmers/SortKmersE.o obj/sort_kmers/SortKmersF.o obj/sort_kmers/SortKmersG.o obj/sort_kmers/SortKmersH.o obj/sort_kmers/SortKmersI.o obj/system/Assert.o obj/system/Crash.o obj/system/Exit.o obj/system/MemTracker.o obj/system/ParsedArgs.o obj/system/ProcBuf.o obj/system/RunTime.o obj/system/StdioWrapper.o obj/system/System.o obj/system/Threads.o obj/system/TraceVal.o obj/system/Types.o obj/system/WorklistUtils.o obj/util/BaitMap.o obj/util/Kronos.o >ar -qc obj/lib_VAAL1_temp.a obj/Alignment.o obj/Basevector.o obj/BasevectorTools.o obj/Bitvector.o obj/BlockAlign.o obj/Charvector.o obj/CompressedSequence.o obj/Equiv.o obj/FastIfstream.o obj/FastaConverter.o obj/FastaFileset.o obj/FastaFilestream.o obj/FastaFilestreamPreview.o obj/FastaNameParser.o obj/FastaVerifier.o obj/FetchReads.o obj/Feudal.o obj/FeudalFileWriter.o obj/FeudalMimic.o obj/FeudalReadPart.o obj/HashSimple.o obj/IndexedAlignmentPlusVector.o obj/KmerRecord.o obj/KmerShape.o obj/MemberOf.o obj/PackAlign.o obj/PairsHandler.o obj/ParseRange.o obj/ParseSet.o obj/PrintAlignment.o obj/Qualvector.o obj/ReadPairing.o obj/ScoreAlignment.o obj/SeqInterval.o obj/SortKmers.o obj/String.o obj/TokenizeString.o obj/Vec.o obj/VecAlignmentPlus.o obj/VecOverlap.o obj/VecString.o obj/charTranslations.o obj/graph/Digraph.o obj/graphics/BasicGraphics.o obj/graphics/Color.o obj/lookup/FlowAlignSummary.o obj/lookup/Hit.o obj/lookup/LookAlign.o obj/lookup/LookAlignFinder.o obj/lookup/LookAlignSort.o obj/lookup/LookupTable.o obj/lookup/PerfectCount.o obj/lookup/PerfectLookup.o obj/math/Arith.o obj/math/Functions.o obj/math/HoInterval.o obj/math/Matrix.o obj/math/Permutation.o obj/pairwise_aligners/MatchList.o obj/pairwise_aligners/MaxMutmerFromMer.o obj/pairwise_aligners/Mutmer.o obj/pairwise_aligners/PerfectAligner.o obj/pairwise_aligners/SmithWatBandedA.o obj/paths/AddSuperReads.o obj/paths/AlignAndMerge.o obj/paths/CompletedInsert.o obj/paths/ExtendUnipathSeqs.o obj/paths/FindClosures.o obj/paths/GapSkip.o obj/paths/HyperKmerPath.o obj/paths/HyperKmerPathCleaner.o obj/paths/ImproperMerge.o obj/paths/KmerBaseBroker.o obj/paths/KmerPath.o obj/paths/KmerPathBreadthSearcher.o obj/paths/KmerPathDatabase.o obj/paths/KmerPathInterval.o obj/paths/KmerPathMuxSearcher.o obj/paths/MakeAlignsPathsParallelX.o obj/paths/Mux.o obj/paths/MuxGraph.o obj/paths/MuxSearchAgent.o obj/paths/MuxSearchPolicy.o obj/paths/MuxToPath.o obj/paths/MuxWalkGraph.o obj/paths/NegativeGapValidator.o obj/paths/OffsetTracker.o obj/paths/PairedPair.o obj/paths/PathEmbedding.o obj/paths/PathWalk.o obj/paths/PileReadsOnPath.o obj/paths/ReadFillDatabase.o obj/paths/ReadFillRecord.o obj/paths/ReadsToPathsCoreX.o obj/paths/SimpleWalk.o obj/paths/SubsumptionList.o obj/paths/Unipath.o obj/paths/UnipathSeq.o obj/paths/UnipathSeqBuilder.o obj/paths/VerifyGapLengths.o obj/paths/WalkPlot.o obj/polymorphism/VAAL1.o obj/polymorphism/VAALTools.o obj/random/Bernoulli.o obj/random/Random.o obj/random/SequenceEntropy.o obj/random/Shuffle.o obj/solexa/FourBase.o obj/solexa/FourBase2.o obj/solexa/SolexaTools.o obj/sort_kmers/SortKmersA.o obj/sort_kmers/SortKmersB.o obj/sort_kmers/SortKmersC.o obj/sort_kmers/SortKmersD.o obj/sort_kmers/SortKmersE.o obj/sort_kmers/SortKmersF.o obj/sort_kmers/SortKmersG.o obj/sort_kmers/SortKmersH.o obj/sort_kmers/SortKmersI.o obj/system/Assert.o obj/system/Crash.o obj/system/Exit.o obj/system/MemTracker.o obj/system/ParsedArgs.o obj/system/ProcBuf.o obj/system/RunTime.o obj/system/StdioWrapper.o obj/system/System.o obj/system/Threads.o obj/system/TraceVal.o obj/system/Types.o obj/system/WorklistUtils.o obj/util/BaitMap.o obj/util/Kronos.o >ar -qc obj/lib_VAAL4_temp.a obj/Alignment.o obj/Basevector.o obj/BasevectorTools.o obj/Bitvector.o obj/BlockAlign.o obj/Charvector.o obj/CompressedSequence.o obj/Equiv.o obj/FastIfstream.o obj/FastaConverter.o obj/FastaFileset.o obj/FastaFilestream.o obj/FastaFilestreamPreview.o obj/FastaNameParser.o obj/FastaVerifier.o obj/FetchReads.o obj/Feudal.o obj/FeudalFileWriter.o obj/FeudalMimic.o obj/FeudalReadPart.o obj/HashSimple.o obj/IndexedAlignmentPlusVector.o obj/KmerRecord.o obj/KmerShape.o obj/MemberOf.o obj/PackAlign.o obj/PairsHandler.o obj/ParseRange.o obj/ParseSet.o obj/PrintAlignment.o obj/Qualvector.o obj/ReadPairing.o obj/ScoreAlignment.o obj/SeqInterval.o obj/SortKmers.o obj/String.o obj/TokenizeString.o obj/Vec.o obj/VecAlignmentPlus.o obj/VecOverlap.o obj/VecString.o obj/charTranslations.o obj/graph/Digraph.o obj/graphics/BasicGraphics.o obj/graphics/Color.o obj/lookup/FlowAlignSummary.o obj/lookup/LookAlign.o obj/lookup/LookAlignFinder.o obj/lookup/LookAlignSort.o obj/math/Arith.o obj/math/Functions.o obj/math/HoInterval.o obj/math/Matrix.o obj/math/Permutation.o obj/pairwise_aligners/MatchList.o obj/pairwise_aligners/MaxMutmerFromMer.o obj/pairwise_aligners/Mutmer.o obj/pairwise_aligners/PerfectAligner.o obj/pairwise_aligners/SmithWatBandedA.o obj/pairwise_aligners/SmithWatFree.o obj/paths/AddSuperReads.o obj/paths/AlignAndMerge.o obj/paths/CompletedInsert.o obj/paths/ExtendUnipathSeqs.o obj/paths/FindClosures.o obj/paths/GapSkip.o obj/paths/HyperKmerPath.o obj/paths/HyperKmerPathCleaner.o obj/paths/ImproperMerge.o obj/paths/KmerBaseBroker.o obj/paths/KmerPath.o obj/paths/KmerPathBreadthSearcher.o obj/paths/KmerPathDatabase.o obj/paths/KmerPathInterval.o obj/paths/KmerPathMuxSearcher.o obj/paths/MakeAlignsPathsParallelX.o obj/paths/Mux.o obj/paths/MuxGraph.o obj/paths/MuxSearchAgent.o obj/paths/MuxSearchPolicy.o obj/paths/MuxToPath.o obj/paths/MuxWalkGraph.o obj/paths/NegativeGapValidator.o obj/paths/OffsetTracker.o obj/paths/PairedPair.o obj/paths/PathEmbedding.o obj/paths/PathWalk.o obj/paths/PileReadsOnPath.o obj/paths/ReadFillDatabase.o obj/paths/ReadFillRecord.o obj/paths/ReadsToPathsCoreX.o obj/paths/SimpleWalk.o obj/paths/SubsumptionList.o obj/paths/Unipath.o obj/paths/UnipathSeq.o obj/paths/UnipathSeqBuilder.o obj/paths/VerifyGapLengths.o obj/paths/WalkPlot.o obj/polymorphism/TruePolyCore.o obj/polymorphism/VAAL4.o obj/polymorphism/VAALTools.o obj/random/Bernoulli.o obj/random/Random.o obj/random/SequenceEntropy.o obj/random/Shuffle.o obj/solexa/FourBase.o obj/solexa/FourBase2.o obj/solexa/SolexaTools.o obj/sort_kmers/SortKmersA.o obj/sort_kmers/SortKmersB.o obj/sort_kmers/SortKmersC.o obj/sort_kmers/SortKmersD.o obj/sort_kmers/SortKmersE.o obj/sort_kmers/SortKmersF.o obj/sort_kmers/SortKmersG.o obj/sort_kmers/SortKmersH.o obj/sort_kmers/SortKmersI.o obj/system/Assert.o obj/system/Crash.o obj/system/Exit.o obj/system/MemTracker.o obj/system/ParsedArgs.o obj/system/ProcBuf.o obj/system/RunTime.o obj/system/StdioWrapper.o obj/system/System.o obj/system/Threads.o obj/system/TraceVal.o obj/system/Types.o obj/system/WorklistUtils.o obj/util/BaitMap.o obj/util/Kronos.o >In file included from ./polymorphism/VAAL2.cc:35: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./polymorphism/VAAL2.cc:35: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >bin/checkLock bin/VAAL0.5 >i686-pc-linux-gnu-g++ -ggdb3 -o bin/VAAL0.5 obj/polymorphism/VAAL0.5.o -L. -L. -Lobj -L/usr/lib -lboost_serialization-mt -lboost_system-mt -lpthread -l_VAAL0.5_temp >In file included from ./paths/AlignHyperKmerPath.cc:22: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./paths/AlignHyperKmerPath.cc:22: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/AlignCollector.h:21, > from ./lookup/ImperfectLookup.h:54, > from ./polymorphism/VAAL3.cc:25: >./VecTemplate.h:380:2: warning: #warning is a GCC extension >./VecTemplate.h:380:2: warning: #warning Unable to implement BinaryMmap3(), defaulting to use BinaryRead3() instead. >In file included from ./lookup/ImperfectLookup.h:51, > from ./polymorphism/VAAL3.cc:26: >./lookup/LookAlign.h: In member function 'void look_align::BinaryRead(int)': >./lookup/LookAlign.h:264: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:266: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:270: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:271: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h:277: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/ImperfectLookup.h:51, > from ./polymorphism/VAAL3.cc:26: >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, vec<genome_pos>&, const String&)': >./lookup/LookAlign.h:678: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./lookup/LookAlign.h: In function 'void LoadUniqueLocs(const String&, const String&, vec<genome_pos_plus>&)': >./lookup/LookAlign.h:734: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/ImperfectLookup.h:50, > from ./polymorphism/VAAL3.cc:26: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<unsigned char>, A = unsigned char]': >./polymorphism/VAAL3.cc:78: instantiated from here >./FeudalTemplate.h:711: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:720: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h:722: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = serfvec<unsigned char>]': >./FeudalTemplate.h:704: instantiated from 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<unsigned char>, A = unsigned char]' >./polymorphism/VAAL3.cc:78: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = serfvec<unsigned char>, A = unsigned char]': >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = serfvec<unsigned char>, A = unsigned char]' >./FeudalTemplate.h:728: instantiated from 'void mastervec<X, A>::ReadAll(const String&, Bool, Bool) [with X = serfvec<unsigned char>, A = unsigned char]' >./polymorphism/VAAL3.cc:78: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]': >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = basevector, A = unsigned int]' >./FeudalTemplate.h:73: instantiated from 'mastervec<X, A>::mastervec(const String&) [with X = basevector, A = unsigned int]' >./polymorphism/VAAL3.cc:87: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/ImperfectLookup.h:50, > from ./polymorphism/VAAL3.cc:26: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = bitvector, A = unsigned int]': >./FeudalTemplate.h:738: instantiated from 'void mastervec<X, A>::WriteRange(const String&, int, int) const [with X = bitvector, A = unsigned int]' >./FeudalTemplate.h:746: instantiated from 'void mastervec<X, A>::WriteAll(const String&) const [with X = bitvector, A = unsigned int]' >./polymorphism/VAAL3.cc:467: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Write(const String&, int, int) const [with X = basevector, A = unsigned int]': >./FeudalTemplate.h:738: instantiated from 'void mastervec<X, A>::WriteRange(const String&, int, int) const [with X = basevector, A = unsigned int]' >./FeudalTemplate.h:746: instantiated from 'void mastervec<X, A>::WriteAll(const String&) const [with X = basevector, A = unsigned int]' >./polymorphism/VAAL3.cc:605: instantiated from here >./FeudalTemplate.h:372: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >In file included from ./lookup/ImperfectLookup.h:50, > from ./polymorphism/VAAL3.cc:26: >./FeudalTemplate.h: In member function 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]': >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]' >./FeudalTemplate.h:73: instantiated from 'mastervec<X, A>::mastervec(const String&) [with X = KmerPath, A = KmerPathInterval]' >./paths/KmerBaseBroker.h:58: instantiated from 'KmerBaseBrokerTemplate<TAG>::KmerBaseBrokerTemplate(String, int, String, String, bool) [with TAG = tagged_rpint]' >./paths/NegativeGapValidator.h:28: instantiated from here >./FeudalTemplate.h:465: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >./FeudalTemplate.h: In function 'bool IsGoodFeudalFile(const String&, const X*, bool, bool) [with X = KmerPath]': >./FeudalTemplate.h:469: instantiated from 'void mastervec<X, A>::Read(const String&, const vec<int>&, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]' >./FeudalTemplate.h:666: instantiated from 'void mastervec<X, A>::ReadRange(const String&, int, int, int, Bool, Bool, Bool) [with X = KmerPath, A = KmerPathInterval]' >./FeudalTemplate.h:73: instantiated from 'mastervec<X, A>::mastervec(const String&) [with X = KmerPath, A = KmerPathInterval]' >./paths/KmerBaseBroker.h:58: instantiated from 'KmerBaseBrokerTemplate<TAG>::KmerBaseBrokerTemplate(String, int, String, String, bool) [with TAG = tagged_rpint]' >./paths/NegativeGapValidator.h:28: instantiated from here >./FeudalTemplate.h:901: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result >/bin/rm -f obj/lib_VAAL3_temp.a >bin/checkLock bin/VAAL1.5 >i686-pc-linux-gnu-g++ -ggdb3 -o bin/VAAL1.5 obj/polymorphism/VAAL1.5.o -L. -L. -Lobj -L/usr/lib -lboost_serialization-mt -lboost_system-mt -lpthread -l_VAAL1.5_temp >bin/checkLock bin/VAAL1 >i686-pc-linux-gnu-g++ -ggdb3 -o bin/VAAL1 obj/polymorphism/VAAL1.o -L. -L. -Lobj -L/usr/lib -lboost_serialization-mt -lboost_system-mt -lpthread -l_VAAL1_temp >ar -qc obj/lib_VAAL3_temp.a obj/Alignment.o obj/Basevector.o obj/BasevectorTools.o obj/Bitvector.o obj/BlockAlign.o obj/Charvector.o obj/CompressedSequence.o obj/Equiv.o obj/FastIfstream.o obj/FastaConverter.o obj/FastaFileset.o obj/FastaFilestream.o obj/FastaFilestreamPreview.o obj/FastaNameParser.o obj/FastaVerifier.o obj/FetchReads.o obj/Feudal.o obj/FeudalFileWriter.o obj/FeudalMimic.o obj/FeudalReadPart.o obj/HashSimple.o obj/IndexedAlignmentPlusVector.o obj/KmerRecord.o obj/KmerShape.o obj/MemberOf.o obj/PackAlign.o obj/PairsHandler.o obj/ParseRange.o obj/ParseSet.o obj/PrintAlignment.o obj/Qualvector.o obj/ReadPairing.o obj/ScoreAlignment.o obj/SeqInterval.o obj/SortKmers.o obj/String.o obj/TokenizeString.o obj/Vec.o obj/VecAlignmentPlus.o obj/VecOverlap.o obj/VecString.o obj/charTranslations.o obj/graph/Digraph.o obj/graphics/BasicGraphics.o obj/graphics/Color.o obj/lookup/AlignCollector.o obj/lookup/FlowAlignSummary.o obj/lookup/Hit.o obj/lookup/HitReceiver.o obj/lookup/ImperfectLookup.o obj/lookup/LookAlign.o obj/lookup/LookAlignFinder.o obj/lookup/LookAlignSort.o obj/lookup/LookupTable.o obj/lookup/PerfectCount.o obj/lookup/PerfectLookup.o obj/math/Arith.o obj/math/Functions.o obj/math/HoInterval.o obj/math/Matrix.o obj/math/Permutation.o obj/pairwise_aligners/MatchList.o obj/pairwise_aligners/MaxMutmerFromMer.o obj/pairwise_aligners/Mutmer.o obj/pairwise_aligners/PerfectAligner.o obj/pairwise_aligners/SmithWatBandedA.o obj/paths/AddSuperReads.o obj/paths/AlignAndMerge.o obj/paths/CompletedInsert.o obj/paths/ExtendUnipathSeqs.o obj/paths/FindClosures.o obj/paths/GapSkip.o obj/paths/HyperKmerPath.o obj/paths/HyperKmerPathCleaner.o obj/paths/ImproperMerge.o obj/paths/KmerBaseBroker.o obj/paths/KmerPath.o obj/paths/KmerPathBreadthSearcher.o obj/paths/KmerPathDatabase.o obj/paths/KmerPathInterval.o obj/paths/KmerPathMuxSearcher.o obj/paths/MakeAlignsPathsParallelX.o obj/paths/Mux.o obj/paths/MuxGraph.o obj/paths/MuxSearchAgent.o obj/paths/MuxSearchPolicy.o obj/paths/MuxToPath.o obj/paths/MuxWalkGraph.o obj/paths/NegativeGapValidator.o obj/paths/OffsetTracker.o obj/paths/PairedPair.o obj/paths/PathEmbedding.o obj/paths/PathWalk.o obj/paths/PileReadsOnPath.o obj/paths/ReadFillDatabase.o obj/paths/ReadFillRecord.o obj/paths/ReadsToPathsCoreX.o obj/paths/SimpleWalk.o obj/paths/SubsumptionList.o obj/paths/Unipath.o obj/paths/UnipathSeq.o obj/paths/UnipathSeqBuilder.o obj/paths/VerifyGapLengths.o obj/paths/WalkPlot.o obj/polymorphism/VAAL3.o obj/polymorphism/VAALTools.o obj/random/Bernoulli.o obj/random/Random.o obj/random/SequenceEntropy.o obj/random/Shuffle.o obj/solexa/FourBase.o obj/solexa/FourBase2.o obj/solexa/SolexaTools.o obj/solid/Solid.o obj/sort_kmers/SortKmersA.o obj/sort_kmers/SortKmersB.o obj/sort_kmers/SortKmersC.o obj/sort_kmers/SortKmersD.o obj/sort_kmers/SortKmersE.o obj/sort_kmers/SortKmersF.o obj/sort_kmers/SortKmersG.o obj/sort_kmers/SortKmersH.o obj/sort_kmers/SortKmersI.o obj/system/Assert.o obj/system/Crash.o obj/system/Exit.o obj/system/MemTracker.o obj/system/ParsedArgs.o obj/system/ProcBuf.o obj/system/RunTime.o obj/system/StdioWrapper.o obj/system/System.o obj/system/Threads.o obj/system/TraceVal.o obj/system/Types.o obj/system/WorklistUtils.o obj/util/BaitMap.o obj/util/Kronos.o >bin/checkLock bin/VAAL4 >i686-pc-linux-gnu-g++ -ggdb3 -o bin/VAAL4 obj/polymorphism/VAAL4.o -L. -L. -Lobj -L/usr/lib -lboost_serialization-mt -lboost_system-mt -lpthread -l_VAAL4_temp >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `text_oarchive': >/usr/include/boost/archive/text_oarchive.hpp:86: undefined reference to `boost::archive::text_oarchive_impl<boost::archive::text_oarchive>::text_oarchive_impl(std::basic_ostream<char, std::char_traits<char> >&, unsigned int)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::save_standard::invoke(boost::archive::text_oarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `text_iarchive': >/usr/include/boost/archive/text_iarchive.hpp:110: undefined reference to `boost::archive::text_iarchive_impl<boost::archive::text_iarchive>::text_iarchive_impl(std::basic_istream<char, std::char_traits<char> >&, unsigned int)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::load_standard::invoke(boost::archive::text_iarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >obj/lib_VAAL0.5_temp.a(VAALTools.o):/usr/include/boost/archive/detail/iserializer.hpp:152: more undefined references to `boost::archive::detail::basic_iserializer::~basic_iserializer()' follow >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >obj/lib_VAAL0.5_temp.a(VAALTools.o):/usr/include/boost/archive/detail/oserializer.hpp:133: more undefined references to `boost::archive::detail::basic_oserializer::~basic_oserializer()' follow >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `operator>><boost::archive::class_name_type>': >/usr/include/boost/archive/detail/interface_iarchive.hpp:61: undefined reference to `boost::archive::text_iarchive_impl<boost::archive::text_iarchive>::load_override(boost::archive::class_name_type&, int)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >/usr/include/boost/archive/detail/oserializer.hpp:95: undefined reference to `boost::archive::text_oarchive_impl<boost::archive::text_oarchive>::save(std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save<int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::archive::tracking_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save<boost::archive::tracking_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save<int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `load_collection<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >, boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >, boost::serialization::stl::reserve_imp<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >': >/usr/include/boost/serialization/collections_load_imp.hpp:182: undefined reference to `boost::archive::detail::basic_iarchive::get_library_version() const' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::load_standard::invoke(boost::archive::text_iarchive&, std::vector<PositionLink, std::allocator<PositionLink> >&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::operator()(boost::archive::text_iarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >&, unsigned int)': >/usr/include/boost/serialization/collections_load_imp.hpp:63: undefined reference to `boost::archive::detail::basic_iarchive::reset_object_address(void const*, void const*)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `load_collection<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> >, boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >, boost::serialization::stl::reserve_imp<std::vector<PositionLink, std::allocator<PositionLink> > > >': >/usr/include/boost/serialization/collections_load_imp.hpp:182: undefined reference to `boost::archive::detail::basic_iarchive::get_library_version() const' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, PositionLink>::load_standard::invoke(boost::archive::text_iarchive&, PositionLink&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::operator()(boost::archive::text_iarchive&, std::vector<PositionLink, std::allocator<PositionLink> >&, unsigned int)': >/usr/include/boost/serialization/collections_load_imp.hpp:63: undefined reference to `boost::archive::detail::basic_iarchive::reset_object_address(void const*, void const*)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<PositionLink> >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::serialization::collection_size_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save<boost::serialization::collection_size_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save_collection<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >': >/usr/include/boost/serialization/collections_save_imp.hpp:43: undefined reference to `boost::archive::detail::basic_oarchive::get_library_version() const' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::save_standard::invoke(boost::archive::text_oarchive&, std::vector<PositionLink, std::allocator<PositionLink> > const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::serialization::collection_size_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save<boost::serialization::collection_size_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save_collection<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >': >/usr/include/boost/serialization/collections_save_imp.hpp:43: undefined reference to `boost::archive::detail::basic_oarchive::get_library_version() const' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, PositionLink>::save_standard::invoke(boost::archive::text_oarchive&, PositionLink const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL0.5_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<PositionLink> >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveESt6vectorI12PositionLinkSaIS5_EEEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorI12PositionLinkSaIS5_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorI12PositionLinkSaIS5_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[typeinfo for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveESt6vectorI12PositionLinkSaIS5_EEEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveE12PositionLinkEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, PositionLink>]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidI12PositionLinkEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<PositionLink> >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidI12PositionLinkEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<PositionLink> >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[typeinfo for boost::serialization::extended_type_info_typeid<PositionLink>]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[vtable for boost::serialization::extended_type_info_typeid<PositionLink>]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[vtable for boost::serialization::extended_type_info_typeid<PositionLink>]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveE12PositionLinkEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, PositionLink>]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveESt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveESt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[typeinfo for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail15common_iarchiveINS0_13text_iarchiveEEE[typeinfo for boost::archive::detail::common_iarchive<boost::archive::text_iarchive>]+0x10): undefined reference to `typeinfo for boost::archive::detail::basic_iarchive' >obj/lib_VAAL0.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail15common_oarchiveINS0_13text_oarchiveEEE[typeinfo for boost::archive::detail::common_oarchive<boost::archive::text_oarchive>]+0x10): undefined reference to `typeinfo for boost::archive::detail::basic_oarchive' >collect2: ld returned 1 exit status >make: *** [VAAL0.5] Error 1 >make: *** Waiting for unfinished jobs.... >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `text_oarchive': >/usr/include/boost/archive/text_oarchive.hpp:86: undefined reference to `boost::archive::text_oarchive_impl<boost::archive::text_oarchive>::text_oarchive_impl(std::basic_ostream<char, std::char_traits<char> >&, unsigned int)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::save_standard::invoke(boost::archive::text_oarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `text_iarchive': >/usr/include/boost/archive/text_iarchive.hpp:110: undefined reference to `boost::archive::text_iarchive_impl<boost::archive::text_iarchive>::text_iarchive_impl(std::basic_istream<char, std::char_traits<char> >&, unsigned int)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::load_standard::invoke(boost::archive::text_iarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >obj/lib_VAAL1.5_temp.a(VAALTools.o):/usr/include/boost/archive/detail/iserializer.hpp:152: more undefined references to `boost::archive::detail::basic_iserializer::~basic_iserializer()' follow >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >obj/lib_VAAL1.5_temp.a(VAALTools.o):/usr/include/boost/archive/detail/oserializer.hpp:133: more undefined references to `boost::archive::detail::basic_oserializer::~basic_oserializer()' follow >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `operator>><boost::archive::class_name_type>': >/usr/include/boost/archive/detail/interface_iarchive.hpp:61: undefined reference to `boost::archive::text_iarchive_impl<boost::archive::text_iarchive>::load_override(boost::archive::class_name_type&, int)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >/usr/include/boost/archive/detail/oserializer.hpp:95: undefined reference to `boost::archive::text_oarchive_impl<boost::archive::text_oarchive>::save(std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save<int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::archive::tracking_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save<boost::archive::tracking_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save<int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `load_collection<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >, boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >, boost::serialization::stl::reserve_imp<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >': >/usr/include/boost/serialization/collections_load_imp.hpp:182: undefined reference to `boost::archive::detail::basic_iarchive::get_library_version() const' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::load_standard::invoke(boost::archive::text_iarchive&, std::vector<PositionLink, std::allocator<PositionLink> >&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::operator()(boost::archive::text_iarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >&, unsigned int)': >/usr/include/boost/serialization/collections_load_imp.hpp:63: undefined reference to `boost::archive::detail::basic_iarchive::reset_object_address(void const*, void const*)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `load_collection<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> >, boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >, boost::serialization::stl::reserve_imp<std::vector<PositionLink, std::allocator<PositionLink> > > >': >/usr/include/boost/serialization/collections_load_imp.hpp:182: undefined reference to `boost::archive::detail::basic_iarchive::get_library_version() const' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, PositionLink>::load_standard::invoke(boost::archive::text_iarchive&, PositionLink&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::operator()(boost::archive::text_iarchive&, std::vector<PositionLink, std::allocator<PositionLink> >&, unsigned int)': >/usr/include/boost/serialization/collections_load_imp.hpp:63: undefined reference to `boost::archive::detail::basic_iarchive::reset_object_address(void const*, void const*)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<PositionLink> >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::serialization::collection_size_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save<boost::serialization::collection_size_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save_collection<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >': >/usr/include/boost/serialization/collections_save_imp.hpp:43: undefined reference to `boost::archive::detail::basic_oarchive::get_library_version() const' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::save_standard::invoke(boost::archive::text_oarchive&, std::vector<PositionLink, std::allocator<PositionLink> > const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::serialization::collection_size_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save<boost::serialization::collection_size_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save_collection<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >': >/usr/include/boost/serialization/collections_save_imp.hpp:43: undefined reference to `boost::archive::detail::basic_oarchive::get_library_version() const' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, PositionLink>::save_standard::invoke(boost::archive::text_oarchive&, PositionLink const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1.5_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<PositionLink> >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveESt6vectorI12PositionLinkSaIS5_EEEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorI12PositionLinkSaIS5_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorI12PositionLinkSaIS5_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[typeinfo for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveESt6vectorI12PositionLinkSaIS5_EEEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveE12PositionLinkEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, PositionLink>]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidI12PositionLinkEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<PositionLink> >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidI12PositionLinkEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<PositionLink> >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[typeinfo for boost::serialization::extended_type_info_typeid<PositionLink>]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[vtable for boost::serialization::extended_type_info_typeid<PositionLink>]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[vtable for boost::serialization::extended_type_info_typeid<PositionLink>]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveE12PositionLinkEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, PositionLink>]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveESt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveESt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[typeinfo for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail15common_iarchiveINS0_13text_iarchiveEEE[typeinfo for boost::archive::detail::common_iarchive<boost::archive::text_iarchive>]+0x10): undefined reference to `typeinfo for boost::archive::detail::basic_iarchive' >obj/lib_VAAL1.5_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail15common_oarchiveINS0_13text_oarchiveEEE[typeinfo for boost::archive::detail::common_oarchive<boost::archive::text_oarchive>]+0x10): undefined reference to `typeinfo for boost::archive::detail::basic_oarchive' >collect2: ld returned 1 exit status >make: *** [VAAL1.5] Error 1 >obj/lib_VAAL1_temp.a(VAALTools.o): In function `text_oarchive': >/usr/include/boost/archive/text_oarchive.hpp:86: undefined reference to `boost::archive::text_oarchive_impl<boost::archive::text_oarchive>::text_oarchive_impl(std::basic_ostream<char, std::char_traits<char> >&, unsigned int)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::save_standard::invoke(boost::archive::text_oarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `text_iarchive': >/usr/include/boost/archive/text_iarchive.hpp:110: undefined reference to `boost::archive::text_iarchive_impl<boost::archive::text_iarchive>::text_iarchive_impl(std::basic_istream<char, std::char_traits<char> >&, unsigned int)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::load_standard::invoke(boost::archive::text_iarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >obj/lib_VAAL1_temp.a(VAALTools.o):/usr/include/boost/archive/detail/iserializer.hpp:152: more undefined references to `boost::archive::detail::basic_iserializer::~basic_iserializer()' follow >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >obj/lib_VAAL1_temp.a(VAALTools.o):/usr/include/boost/archive/detail/oserializer.hpp:133: more undefined references to `boost::archive::detail::basic_oserializer::~basic_oserializer()' follow >obj/lib_VAAL1_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `operator>><boost::archive::class_name_type>': >/usr/include/boost/archive/detail/interface_iarchive.hpp:61: undefined reference to `boost::archive::text_iarchive_impl<boost::archive::text_iarchive>::load_override(boost::archive::class_name_type&, int)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >/usr/include/boost/archive/detail/oserializer.hpp:95: undefined reference to `boost::archive::text_oarchive_impl<boost::archive::text_oarchive>::save(std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save<int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::archive::tracking_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save<boost::archive::tracking_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save<int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `load_collection<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >, boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >, boost::serialization::stl::reserve_imp<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >': >/usr/include/boost/serialization/collections_load_imp.hpp:182: undefined reference to `boost::archive::detail::basic_iarchive::get_library_version() const' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::load_standard::invoke(boost::archive::text_iarchive&, std::vector<PositionLink, std::allocator<PositionLink> >&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::operator()(boost::archive::text_iarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >&, unsigned int)': >/usr/include/boost/serialization/collections_load_imp.hpp:63: undefined reference to `boost::archive::detail::basic_iarchive::reset_object_address(void const*, void const*)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `load_collection<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> >, boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >, boost::serialization::stl::reserve_imp<std::vector<PositionLink, std::allocator<PositionLink> > > >': >/usr/include/boost/serialization/collections_load_imp.hpp:182: undefined reference to `boost::archive::detail::basic_iarchive::get_library_version() const' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, PositionLink>::load_standard::invoke(boost::archive::text_iarchive&, PositionLink&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::operator()(boost::archive::text_iarchive&, std::vector<PositionLink, std::allocator<PositionLink> >&, unsigned int)': >/usr/include/boost/serialization/collections_load_imp.hpp:63: undefined reference to `boost::archive::detail::basic_iarchive::reset_object_address(void const*, void const*)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<PositionLink> >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::serialization::collection_size_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save<boost::serialization::collection_size_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save_collection<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >': >/usr/include/boost/serialization/collections_save_imp.hpp:43: undefined reference to `boost::archive::detail::basic_oarchive::get_library_version() const' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::save_standard::invoke(boost::archive::text_oarchive&, std::vector<PositionLink, std::allocator<PositionLink> > const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::serialization::collection_size_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save<boost::serialization::collection_size_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save_collection<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >': >/usr/include/boost/serialization/collections_save_imp.hpp:43: undefined reference to `boost::archive::detail::basic_oarchive::get_library_version() const' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, PositionLink>::save_standard::invoke(boost::archive::text_oarchive&, PositionLink const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL1_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<PositionLink> >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveESt6vectorI12PositionLinkSaIS5_EEEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorI12PositionLinkSaIS5_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorI12PositionLinkSaIS5_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[typeinfo for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveESt6vectorI12PositionLinkSaIS5_EEEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveE12PositionLinkEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, PositionLink>]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidI12PositionLinkEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<PositionLink> >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidI12PositionLinkEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<PositionLink> >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[typeinfo for boost::serialization::extended_type_info_typeid<PositionLink>]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[vtable for boost::serialization::extended_type_info_typeid<PositionLink>]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[vtable for boost::serialization::extended_type_info_typeid<PositionLink>]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveE12PositionLinkEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, PositionLink>]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveESt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveESt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[typeinfo for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail15common_iarchiveINS0_13text_iarchiveEEE[typeinfo for boost::archive::detail::common_iarchive<boost::archive::text_iarchive>]+0x10): undefined reference to `typeinfo for boost::archive::detail::basic_iarchive' >obj/lib_VAAL1_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail15common_oarchiveINS0_13text_oarchiveEEE[typeinfo for boost::archive::detail::common_oarchive<boost::archive::text_oarchive>]+0x10): undefined reference to `typeinfo for boost::archive::detail::basic_oarchive' >collect2: ld returned 1 exit status >make: *** [VAAL1] Error 1 >obj/lib_VAAL4_temp.a(VAALTools.o): In function `text_oarchive': >/usr/include/boost/archive/text_oarchive.hpp:86: undefined reference to `boost::archive::text_oarchive_impl<boost::archive::text_oarchive>::text_oarchive_impl(std::basic_ostream<char, std::char_traits<char> >&, unsigned int)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::save_standard::invoke(boost::archive::text_oarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `text_iarchive': >/usr/include/boost/archive/text_iarchive.hpp:110: undefined reference to `boost::archive::text_iarchive_impl<boost::archive::text_iarchive>::text_iarchive_impl(std::basic_istream<char, std::char_traits<char> >&, unsigned int)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::load_standard::invoke(boost::archive::text_iarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >obj/lib_VAAL4_temp.a(VAALTools.o):/usr/include/boost/archive/detail/iserializer.hpp:152: more undefined references to `boost::archive::detail::basic_iserializer::~basic_iserializer()' follow >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >obj/lib_VAAL4_temp.a(VAALTools.o):/usr/include/boost/archive/detail/oserializer.hpp:133: more undefined references to `boost::archive::detail::basic_oserializer::~basic_oserializer()' follow >obj/lib_VAAL4_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `operator>><boost::archive::class_name_type>': >/usr/include/boost/archive/detail/interface_iarchive.hpp:61: undefined reference to `boost::archive::text_iarchive_impl<boost::archive::text_iarchive>::load_override(boost::archive::class_name_type&, int)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >/usr/include/boost/archive/detail/oserializer.hpp:95: undefined reference to `boost::archive::text_oarchive_impl<boost::archive::text_oarchive>::save(std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save<int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::archive::tracking_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save<boost::archive::tracking_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save<int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `load_collection<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >, boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >, boost::serialization::stl::reserve_imp<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >': >/usr/include/boost/serialization/collections_load_imp.hpp:182: undefined reference to `boost::archive::detail::basic_iarchive::get_library_version() const' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::load_standard::invoke(boost::archive::text_iarchive&, std::vector<PositionLink, std::allocator<PositionLink> >&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::operator()(boost::archive::text_iarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >&, unsigned int)': >/usr/include/boost/serialization/collections_load_imp.hpp:63: undefined reference to `boost::archive::detail::basic_iarchive::reset_object_address(void const*, void const*)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `load_collection<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> >, boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >, boost::serialization::stl::reserve_imp<std::vector<PositionLink, std::allocator<PositionLink> > > >': >/usr/include/boost/serialization/collections_load_imp.hpp:182: undefined reference to `boost::archive::detail::basic_iarchive::get_library_version() const' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, PositionLink>::load_standard::invoke(boost::archive::text_iarchive&, PositionLink&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::operator()(boost::archive::text_iarchive&, std::vector<PositionLink, std::allocator<PositionLink> >&, unsigned int)': >/usr/include/boost/serialization/collections_load_imp.hpp:63: undefined reference to `boost::archive::detail::basic_iarchive::reset_object_address(void const*, void const*)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<PositionLink> >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::serialization::collection_size_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save<boost::serialization::collection_size_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save_collection<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >': >/usr/include/boost/serialization/collections_save_imp.hpp:43: undefined reference to `boost::archive::detail::basic_oarchive::get_library_version() const' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::save_standard::invoke(boost::archive::text_oarchive&, std::vector<PositionLink, std::allocator<PositionLink> > const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::serialization::collection_size_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save<boost::serialization::collection_size_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save_collection<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >': >/usr/include/boost/serialization/collections_save_imp.hpp:43: undefined reference to `boost::archive::detail::basic_oarchive::get_library_version() const' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, PositionLink>::save_standard::invoke(boost::archive::text_oarchive&, PositionLink const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL4_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<PositionLink> >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveESt6vectorI12PositionLinkSaIS5_EEEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorI12PositionLinkSaIS5_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorI12PositionLinkSaIS5_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[typeinfo for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveESt6vectorI12PositionLinkSaIS5_EEEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveE12PositionLinkEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, PositionLink>]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidI12PositionLinkEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<PositionLink> >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidI12PositionLinkEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<PositionLink> >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[typeinfo for boost::serialization::extended_type_info_typeid<PositionLink>]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[vtable for boost::serialization::extended_type_info_typeid<PositionLink>]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[vtable for boost::serialization::extended_type_info_typeid<PositionLink>]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveE12PositionLinkEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, PositionLink>]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveESt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveESt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[typeinfo for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail15common_iarchiveINS0_13text_iarchiveEEE[typeinfo for boost::archive::detail::common_iarchive<boost::archive::text_iarchive>]+0x10): undefined reference to `typeinfo for boost::archive::detail::basic_iarchive' >obj/lib_VAAL4_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail15common_oarchiveINS0_13text_oarchiveEEE[typeinfo for boost::archive::detail::common_oarchive<boost::archive::text_oarchive>]+0x10): undefined reference to `typeinfo for boost::archive::detail::basic_oarchive' >collect2: ld returned 1 exit status >make: *** [VAAL4] Error 1 >bin/checkLock bin/VAAL3 >i686-pc-linux-gnu-g++ -ggdb3 -o bin/VAAL3 obj/polymorphism/VAAL3.o -L. -L. -Lobj -L/usr/lib -lboost_serialization-mt -lboost_system-mt -lpthread -l_VAAL3_temp >obj/lib_VAAL3_temp.a(VAALTools.o): In function `text_oarchive': >/usr/include/boost/archive/text_oarchive.hpp:86: undefined reference to `boost::archive::text_oarchive_impl<boost::archive::text_oarchive>::text_oarchive_impl(std::basic_ostream<char, std::char_traits<char> >&, unsigned int)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::save_standard::invoke(boost::archive::text_oarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `text_iarchive': >/usr/include/boost/archive/text_iarchive.hpp:110: undefined reference to `boost::archive::text_iarchive_impl<boost::archive::text_iarchive>::text_iarchive_impl(std::basic_istream<char, std::char_traits<char> >&, unsigned int)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::load_standard::invoke(boost::archive::text_iarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >/usr/include/boost/archive/detail/iserializer.hpp:152: undefined reference to `boost::archive::detail::basic_iserializer::~basic_iserializer()' >obj/lib_VAAL3_temp.a(VAALTools.o):/usr/include/boost/archive/detail/iserializer.hpp:152: more undefined references to `boost::archive::detail::basic_iserializer::~basic_iserializer()' follow >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `singleton_wrapper': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >/usr/include/boost/archive/detail/oserializer.hpp:133: undefined reference to `boost::archive::detail::basic_oserializer::~basic_oserializer()' >obj/lib_VAAL3_temp.a(VAALTools.o):/usr/include/boost/archive/detail/oserializer.hpp:133: more undefined references to `boost::archive::detail::basic_oserializer::~basic_oserializer()' follow >obj/lib_VAAL3_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `operator>><boost::archive::class_name_type>': >/usr/include/boost/archive/detail/interface_iarchive.hpp:61: undefined reference to `boost::archive::text_iarchive_impl<boost::archive::text_iarchive>::load_override(boost::archive::class_name_type&, int)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >/usr/include/boost/archive/detail/oserializer.hpp:95: undefined reference to `boost::archive::text_oarchive_impl<boost::archive::text_oarchive>::save(std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~common_oarchive': >/usr/include/boost/archive/detail/common_oarchive.hpp:33: undefined reference to `boost::archive::detail::basic_oarchive::~basic_oarchive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~text_oarchive_impl': >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >/usr/include/boost/archive/text_oarchive.hpp:71: undefined reference to `boost::archive::basic_text_oprimitive<std::basic_ostream<char, std::char_traits<char> > >::~basic_text_oprimitive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_unregister()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:80: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~common_iarchive': >/usr/include/boost/archive/detail/common_iarchive.hpp:34: undefined reference to `boost::archive::detail::basic_iarchive::~basic_iarchive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `~text_iarchive_impl': >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >/usr/include/boost/archive/text_iarchive.hpp:74: undefined reference to `boost::archive::basic_text_iprimitive<std::basic_istream<char, std::char_traits<char> > >::~basic_text_iprimitive()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save<int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::archive::tracking_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save<boost::archive::tracking_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save<int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `load_collection<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >, boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >, boost::serialization::stl::reserve_imp<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >': >/usr/include/boost/serialization/collections_load_imp.hpp:182: undefined reference to `boost::archive::detail::basic_iarchive::get_library_version() const' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::load_standard::invoke(boost::archive::text_iarchive&, std::vector<PositionLink, std::allocator<PositionLink> >&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >::operator()(boost::archive::text_iarchive&, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > >&, unsigned int)': >/usr/include/boost/serialization/collections_load_imp.hpp:63: undefined reference to `boost::archive::detail::basic_iarchive::reset_object_address(void const*, void const*)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `load_collection<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> >, boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >, boost::serialization::stl::reserve_imp<std::vector<PositionLink, std::allocator<PositionLink> > > >': >/usr/include/boost/serialization/collections_load_imp.hpp:182: undefined reference to `boost::archive::detail::basic_iarchive::get_library_version() const' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `boost::archive::detail::load_non_pointer_type<boost::archive::text_iarchive, PositionLink>::load_standard::invoke(boost::archive::text_iarchive&, PositionLink&)': >/usr/include/boost/archive/detail/iserializer.hpp:346: undefined reference to `boost::archive::detail::basic_iarchive::load_object(void*, boost::archive::detail::basic_iserializer const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `boost::serialization::stl::archive_input_seq<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::operator()(boost::archive::text_iarchive&, std::vector<PositionLink, std::allocator<PositionLink> >&, unsigned int)': >/usr/include/boost/serialization/collections_load_imp.hpp:63: undefined reference to `boost::archive::detail::basic_iarchive::reset_object_address(void const*, void const*)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `iserializer': >/usr/include/boost/archive/detail/iserializer.hpp:128: undefined reference to `boost::archive::detail::basic_iserializer::basic_iserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<PositionLink> >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::serialization::collection_size_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save<boost::serialization::collection_size_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save_collection<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >': >/usr/include/boost/serialization/collections_save_imp.hpp:43: undefined reference to `boost::archive::detail::basic_oarchive::get_library_version() const' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >::save_standard::invoke(boost::archive::text_oarchive&, std::vector<PositionLink, std::allocator<PositionLink> > const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, boost::serialization::collection_size_type>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save<boost::serialization::collection_size_type>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save_collection<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >': >/usr/include/boost/serialization/collections_save_imp.hpp:43: undefined reference to `boost::archive::detail::basic_oarchive::get_library_version() const' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `boost::archive::detail::save_non_pointer_type<boost::archive::text_oarchive, PositionLink>::save_standard::invoke(boost::archive::text_oarchive&, PositionLink const&)': >/usr/include/boost/archive/detail/oserializer.hpp:231: undefined reference to `boost::archive::detail::basic_oarchive::save_object(void const*, boost::archive::detail::basic_oserializer const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `oserializer': >/usr/include/boost/archive/detail/oserializer.hpp:112: undefined reference to `boost::archive::detail::basic_oserializer::basic_oserializer(boost::serialization::extended_type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `extended_type_info_typeid': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:75: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::extended_type_info_typeid_0()' >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::type_register(std::type_info const&)' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save_primitive<boost::archive::text_oarchive, unsigned int>': >/usr/include/boost/archive/detail/oserializer.hpp:94: undefined reference to `boost::archive::detail::basic_oarchive::end_preamble()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `save<unsigned int>': >/usr/include/boost/archive/text_oarchive.hpp:53: undefined reference to `boost::archive::basic_text_oarchive<boost::archive::text_oarchive>::newtoken()' >obj/lib_VAAL3_temp.a(VAALTools.o): In function `boost::serialization::singleton<boost::serialization::extended_type_info_typeid<PositionLink> >::get_instance()': >/usr/include/boost/serialization/extended_type_info_typeid.hpp:77: undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::~extended_type_info_typeid_0()' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveESt6vectorI12PositionLinkSaIS5_EEEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorI12PositionLinkSaIS5_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorI12PositionLinkSaIS5_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[typeinfo for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorI12PositionLinkSaIS3_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<PositionLink, std::allocator<PositionLink> > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveESt6vectorI12PositionLinkSaIS5_EEEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, std::vector<PositionLink, std::allocator<PositionLink> > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveE12PositionLinkEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, PositionLink>]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidI12PositionLinkEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<PositionLink> >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidI12PositionLinkEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<PositionLink> >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[typeinfo for boost::serialization::extended_type_info_typeid<PositionLink>]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[vtable for boost::serialization::extended_type_info_typeid<PositionLink>]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidI12PositionLinkEE[vtable for boost::serialization::extended_type_info_typeid<PositionLink>]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveE12PositionLinkEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, PositionLink>]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11oserializerINS0_13text_oarchiveESt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEE[typeinfo for boost::archive::detail::oserializer<boost::archive::text_oarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_oserializer' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail11iserializerINS0_13text_iarchiveESt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEE[typeinfo for boost::archive::detail::iserializer<boost::archive::text_iarchive, std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `typeinfo for boost::archive::detail::basic_iserializer' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization6detail17singleton_wrapperINS0_25extended_type_info_typeidISt6vectorIS4_I12PositionLinkSaIS5_EESaIS7_EEEEEE[vtable for boost::serialization::detail::singleton_wrapper<boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTIN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[typeinfo for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x10): undefined reference to `typeinfo for boost::serialization::detail::extended_type_info_typeid_0' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0x8): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_less_than(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTVN5boost13serialization25extended_type_info_typeidISt6vectorIS2_I12PositionLinkSaIS3_EESaIS5_EEEE[vtable for boost::serialization::extended_type_info_typeid<std::vector<std::vector<PositionLink, std::allocator<PositionLink> >, std::allocator<std::vector<PositionLink, std::allocator<PositionLink> > > > >]+0xc): undefined reference to `boost::serialization::detail::extended_type_info_typeid_0::is_equal(boost::serialization::extended_type_info const&) const' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail15common_iarchiveINS0_13text_iarchiveEEE[typeinfo for boost::archive::detail::common_iarchive<boost::archive::text_iarchive>]+0x10): undefined reference to `typeinfo for boost::archive::detail::basic_iarchive' >obj/lib_VAAL3_temp.a(VAALTools.o):(.rodata._ZTIN5boost7archive6detail15common_oarchiveINS0_13text_oarchiveEEE[typeinfo for boost::archive::detail::common_oarchive<boost::archive::text_oarchive>]+0x10): undefined reference to `typeinfo for boost::archive::detail::basic_oarchive' >collect2: ld returned 1 exit status >make: *** [VAAL3] Error 1 >In file included from ./paths/ReadsToPathsCore.cc:26: >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:38: warning: invoking macro FOR_ALL_KSHAPES_A argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_B argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_C argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_D argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_E argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_F argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_G argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_H argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 >./KmerRecord.h:1015:1: warning: invoking macro FOR_ALL_KSHAPES_I argument 2: empty macro arguments are undefined in ISO C90 and ISO C++98 > [31;01m*[0m ERROR: sci-biology/vaal-1.2 failed: > [31;01m*[0m died running emake, base_src_work:make > [31;01m*[0m > [31;01m*[0m Call stack: > [31;01m*[0m ebuild.sh, line 55: Called src_compile > [31;01m*[0m environment, line 2606: Called base_src_compile > [31;01m*[0m environment, line 366: Called base_src_work 'make' > [31;01m*[0m environment, line 480: Called die > [31;01m*[0m The specific snippet of code: > [31;01m*[0m emake || die "died running emake, $FUNCNAME:make"; > [31;01m*[0m > [31;01m*[0m If you need support, post the output of 'emerge --info =sci-biology/vaal-1.2', > [31;01m*[0m the complete build log and the output of 'emerge -pqv =sci-biology/vaal-1.2'. > [31;01m*[0m The complete build log is located at '/var/log/portage/build/sci-biology/vaal-1.2:20091126-171400.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-biology/vaal-1.2/temp/environment'. > [31;01m*[0m S: '/var/tmp/portage/sci-biology/vaal-1.2/work/VAAL'
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