>>> Unpacking source... >>> Unpacking augustus.2.1.src.tar.gz to /var/tmp/portage/sci-biology/augustus-2.1/work >>> Source unpacked in /var/tmp/portage/sci-biology/augustus-2.1/work >>> Compiling source in /var/tmp/portage/sci-biology/augustus-2.1/work/augustus ... make -j14 -C src clean make: Entering directory `/var/tmp/portage/sci-biology/augustus-2.1/work/augustus/src' rm -f augustus etraining genbank.o properties.o pp_profile.o pp_hitseq.o pp_scoring.o statemodel.o namgene.o types.o gene.o evaluation.o help.o motif.o contentmodel.o geneticcode.o hints.o extrinsicinfo.o projectio.o intronmodel.o exonmodel.o igenicmodel.o utrmodel.o merkmal.o lldouble.o dummy.o ehmmtraining.o igenictrain.o introntrain.o exontrain.o utrtrain.o cflags make: Leaving directory `/var/tmp/portage/sci-biology/augustus-2.1/work/augustus/src' make -j14 -C src make: Entering directory `/var/tmp/portage/sci-biology/augustus-2.1/work/augustus/src' g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o genbank.o genbank.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o properties.o properties.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o pp_profile.o pp_profile.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o pp_hitseq.o pp_hitseq.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o pp_scoring.o pp_scoring.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o statemodel.o statemodel.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o namgene.o namgene.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o types.o types.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o gene.o gene.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o evaluation.o evaluation.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o help.o help.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o motif.o motif.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o contentmodel.o contentmodel.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o geneticcode.o geneticcode.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o hints.o hints.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o extrinsicinfo.o extrinsicinfo.cc -I../include -I. g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O2 -g -ggdb -O2 -pipe -o projectio.o projectio.cc -I../include -I. hints.cc: In function 'std::istream& operator>>(std::istream&, Feature&)': hints.cc:140: error: invalid conversion from 'const char*' to 'char*' hints.cc:144: error: invalid conversion from 'const char*' to 'char*' hints.cc:162: error: invalid conversion from 'const char*' to 'char*' hints.cc:166: error: invalid conversion from 'const char*' to 'char*' hints.cc:179: error: invalid conversion from 'const char*' to 'char*' hints.cc:183: error: invalid conversion from 'const char*' to 'char*' make: *** [hints.o] Error 1 make: *** Waiting for unfinished jobs.... make: Leaving directory `/var/tmp/portage/sci-biology/augustus-2.1/work/augustus/src' * * ERROR: sci-biology/augustus-2.1 failed. * Call stack: * ebuild.sh, line 49: Called src_compile * environment, line 292: Called die * The specific snippet of code: * emake -C src || die * The die message: * (no error message) * * If you need support, post the topmost build error, and the call stack if relevant. * A complete build log is located at '/var/log/portage/sci-biology/augustus-2.1:20090706-025432.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-biology/augustus-2.1/temp/environment'. *