Build log file

build.log (text/plain), 63.65 KB, created by Pierre on 2009-03-27 01:17:17 UTC

>>> Unpacking source...
>>> Unpacking glpk-4.35.tar.gz to /var/tmp/portage/sci-mathematics/glpk-4.35/work
>>> Source unpacked in /var/tmp/portage/sci-mathematics/glpk-4.35/work
>>> Compiling source in /var/tmp/portage/sci-mathematics/glpk-4.35/work/glpk-4.35 ...
Package libiodbc was not found in the pkg-config search path.
Perhaps you should add the directory containing `libiodbc.pc'
to the PKG_CONFIG_PATH environment variable
No package 'libiodbc' found
 * econf: updating glpk-4.35/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating glpk-4.35/config.sub with /usr/share/gnuconfig/config.sub
./configure --prefix=/usr --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --with-zlib --with-gmp --enable-odbc --enable-mysql --enable-dl --libdir=/usr/lib64 --build=x86_64-pc-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
checking for style of include used by make... GNU
checking dependency style of x86_64-pc-linux-gnu-gcc... gcc3
checking for a BSD-compatible install... /usr/bin/install -c
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r
checking for BSD-compatible nm... /usr/bin/nm -B
checking whether ln -s works... yes
checking how to recognize dependent libraries... pass_all
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking the maximum length of command line arguments... 32768
checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok
checking for objdir... .libs
checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar
checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip
checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no
checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC
checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC works... yes
checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes
checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
configure: creating libtool
checking for sqrt in -lm... yes
checking for vsnprintf... yes
checking whether to use GNU MP bignum library... yes
checking whether to use zlib data compression library... yes
checking whether to enable shared library support... ltdl
checking whether to enable MathProg ODBC support... yes
checking whether to enable MathProg MySQL support... yes
configure: creating ./config.status
config.status: creating include/Makefile
config.status: creating src/Makefile
config.status: creating examples/Makefile
config.status: creating Makefile
config.status: creating config.h
config.status: executing depfiles commands
make 
make  all-recursive
make[1]: Entering directory `/var/tmp/portage/sci-mathematics/glpk-4.35/work/glpk-4.35'
Making all in include
make[2]: Entering directory `/var/tmp/portage/sci-mathematics/glpk-4.35/work/glpk-4.35/include'
make[2]: Nothing to be done for `all'.
make[2]: Leaving directory `/var/tmp/portage/sci-mathematics/glpk-4.35/work/glpk-4.35/include'
Making all in src
make[2]: Entering directory `/var/tmp/portage/sci-mathematics/glpk-4.35/work/glpk-4.35/src'
/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi01.lo -MD -MP -MF .deps/glpapi01.Tpo -c -o glpapi01.lo glpapi01.c
mkdir .libs
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mv -f .deps/glpapi01.Tpo .deps/glpapi01.Plo
/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi02.lo -MD -MP -MF .deps/glpapi02.Tpo -c -o glpapi02.lo glpapi02.c
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi02.lo -MD -MP -MF .deps/glpapi02.Tpo -c glpapi02.c  -fPIC -DPIC -o .libs/glpapi02.o
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi03.lo -MD -MP -MF .deps/glpapi03.Tpo -c -o glpapi03.lo glpapi03.c
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi03.lo -MD -MP -MF .deps/glpapi03.Tpo -c glpapi03.c  -fPIC -DPIC -o .libs/glpapi03.o
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi04.lo -MD -MP -MF .deps/glpapi04.Tpo -c -o glpapi04.lo glpapi04.c
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi05.lo -MD -MP -MF .deps/glpapi05.Tpo -c -o glpapi05.lo glpapi05.c
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi06.lo -MD -MP -MF .deps/glpapi06.Tpo -c -o glpapi06.lo glpapi06.c
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi06.lo -MD -MP -MF .deps/glpapi06.Tpo -c glpapi06.c  -fPIC -DPIC -o .libs/glpapi06.o
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi06.lo -MD -MP -MF .deps/glpapi06.Tpo -c glpapi06.c -o glpapi06.o >/dev/null 2>&1
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi07.lo -MD -MP -MF .deps/glpapi07.Tpo -c -o glpapi07.lo glpapi07.c
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi07.lo -MD -MP -MF .deps/glpapi07.Tpo -c glpapi07.c  -fPIC -DPIC -o .libs/glpapi07.o
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi07.lo -MD -MP -MF .deps/glpapi07.Tpo -c glpapi07.c -o glpapi07.o >/dev/null 2>&1
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi08.lo -MD -MP -MF .deps/glpapi08.Tpo -c -o glpapi08.lo glpapi08.c
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi08.lo -MD -MP -MF .deps/glpapi08.Tpo -c glpapi08.c  -fPIC -DPIC -o .libs/glpapi08.o
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi08.lo -MD -MP -MF .deps/glpapi08.Tpo -c glpapi08.c -o glpapi08.o >/dev/null 2>&1
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi09.lo -MD -MP -MF .deps/glpapi09.Tpo -c -o glpapi09.lo glpapi09.c
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi09.lo -MD -MP -MF .deps/glpapi09.Tpo -c glpapi09.c  -fPIC -DPIC -o .libs/glpapi09.o
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi09.lo -MD -MP -MF .deps/glpapi09.Tpo -c glpapi09.c -o glpapi09.o >/dev/null 2>&1
mv -f .deps/glpapi09.Tpo .deps/glpapi09.Plo
/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi10.lo -MD -MP -MF .deps/glpapi10.Tpo -c -o glpapi10.lo glpapi10.c
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi10.lo -MD -MP -MF .deps/glpapi10.Tpo -c glpapi10.c  -fPIC -DPIC -o .libs/glpapi10.o
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi10.lo -MD -MP -MF .deps/glpapi10.Tpo -c glpapi10.c -o glpapi10.o >/dev/null 2>&1
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi11.lo -MD -MP -MF .deps/glpapi11.Tpo -c -o glpapi11.lo glpapi11.c
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi11.lo -MD -MP -MF .deps/glpapi11.Tpo -c glpapi11.c  -fPIC -DPIC -o .libs/glpapi11.o
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi11.lo -MD -MP -MF .deps/glpapi11.Tpo -c glpapi11.c -o glpapi11.o >/dev/null 2>&1
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi12.lo -MD -MP -MF .deps/glpapi12.Tpo -c -o glpapi12.lo glpapi12.c
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi13.lo -MD -MP -MF .deps/glpapi13.Tpo -c -o glpapi13.lo glpapi13.c
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi13.lo -MD -MP -MF .deps/glpapi13.Tpo -c glpapi13.c  -fPIC -DPIC -o .libs/glpapi13.o
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi14.lo -MD -MP -MF .deps/glpapi14.Tpo -c -o glpapi14.lo glpapi14.c
 x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I/usr/include/mysql -O2 -pipe -MT glpapi14.lo -MD -MP -MF .deps/glpapi14.Tpo -c glpapi14.c  -fPIC -DPIC -o .libs/glpapi14.o
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi15.lo -MD -MP -MF .deps/glpapi15.Tpo -c -o glpapi15.lo glpapi15.c
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi16.lo -MD -MP -MF .deps/glpapi16.Tpo -c -o glpapi16.lo glpapi16.c
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpapi17.lo -MD -MP -MF .deps/glpapi17.Tpo -c -o glpapi17.lo glpapi17.c
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/bin/sh ../libtool --tag=CC   --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I../include  -I/usr/include/mysql   -O2 -pipe -MT glpavl.lo -MD -MP -MF .deps/glpavl.Tpo -c -o glpavl.lo glpavl.c
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In file included from glpsql.c:952:
/usr/include/mysql/my_global.h:361:24: error: asm/atomic.h: No such file or directory
make[2]: *** [glpsql.lo] Error 1
make[2]: Leaving directory `/var/tmp/portage/sci-mathematics/glpk-4.35/work/glpk-4.35/src'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/var/tmp/portage/sci-mathematics/glpk-4.35/work/glpk-4.35'
make: *** [all] Error 2
 [31;01m*[0m 
 [31;01m*[0m ERROR: sci-mathematics/glpk-4.35 failed.
 [31;01m*[0m Call stack:
 [31;01m*[0m               ebuild.sh, line   49:  Called src_compile
 [31;01m*[0m             environment, line 2485:  Called die
 [31;01m*[0m The specific snippet of code:
 [31;01m*[0m       emake || die "emake failed"
 [31;01m*[0m  The die message:
 [31;01m*[0m   emake failed
 [31;01m*[0m 
 [31;01m*[0m If you need support, post the topmost build error, and the call stack if relevant.
 [31;01m*[0m A complete build log is located at '/var/tmp/portage/sci-mathematics/glpk-4.35/temp/build.log'.
 [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-mathematics/glpk-4.35/temp/environment'.
 [31;01m*[0m