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Gentoo's Bugzilla – Attachment 183067 Details for
Bug 260180
dev-lang/yap-5.1.3-r1 __open_missing_mode' declared with attribute error: open with O_CREAT in second argument needs 3 arguments
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Build log of yap-5.1.3-r1
dev-lang_yap-5.1.3-r1.log (text/plain), 16.43 KB, created by
Magnus Granberg
on 2009-02-24 20:49:56 UTC
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Description:
Build log of yap-5.1.3-r1
Filename:
MIME Type:
Creator:
Magnus Granberg
Created:
2009-02-24 20:49:56 UTC
Size:
16.43 KB
patch
obsolete
>>>> Unpacking source... >>>> Unpacking Yap-5.1.3.tar.gz to /var/tmp/portage/dev-lang/yap-5.1.3-r1/work > [32;01m*[0m Applying yap-5.1.3-config.h.patch ... >[A[72C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying yap-5.1.3-configure.patch ... >[A[72C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying yap-5.1.3-multilib.patch ... >[A[72C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying yap-5.1.3-parallel-make.patch ... >[A[72C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying yap-5.1.3-dynamic-lib.patch ... >[A[72C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying yap-5.1.3-bootdir.patch ... >[A[72C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying yap-5.1.3-chr.patch ... >[A[72C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying yap-5.1.3-clpbn-examples.patch ... >[A[72C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying yap-5.1.3-tkyap.patch ... >[A[72C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running autoconf ... >[A[72C [34;01m[ [32;01mok[34;01m ][0m >>>> Source unpacked in /var/tmp/portage/dev-lang/yap-5.1.3-r1/work >>>> Compiling source in /var/tmp/portage/dev-lang/yap-5.1.3-r1/work/Yap-5.1.3 ... > * econf: updating Yap-5.1.3/config.sub with /usr/share/gnuconfig/config.sub > * econf: updating Yap-5.1.3/config.guess with /usr/share/gnuconfig/config.guess >./configure --prefix=/usr --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --enable-cut-c --enable-dynamic-loading --disable-threads --disable-pthread-locking --disable-debug-yap --disable-low-level-tracer --disable-myddas-mysql --disable-myddas-stats --disable-myddas-top-level --disable-myddas-odbc --without-gmp --with-readline --without-mpi --without-mpe --without-jpl --build=x86_64-pc-linux-gnu >checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc >checking for C compiler default output file name... a.out >checking whether the C compiler works... yes >checking whether we are cross compiling... no >checking for suffix of executables... >checking for suffix of object files... o >checking whether we are using the GNU C compiler... yes >checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes >checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed >checking build system type... x86_64-pc-linux-gnu >checking host system type... x86_64-pc-linux-gnu >checking target system type... x86_64-pc-linux-gnu >checking whether ln -s works... yes >checking for a BSD-compatible install... /usr/bin/install -c >checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib >checking for x86_64-pc-linux-gnu-indent... no >checking for indent... indent >checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar >checking for x86_64-pc-linux-gnu-mpicc... no >checking for mpicc... no >checking for install-info... /usr/bin/install-info >checking for sh... /bin/sh >checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E >checking for grep that handles long lines and -e... /bin/grep >checking for egrep... /bin/grep -E >checking for ANSI C header files... yes >checking for sin in -lm... yes >checking for socket in -lsocket... no >checking for getsockname in -lxnet... no >checking for main in -lnsl... yes >checking for tgetent in -ltermcap... no >checking for main in -lncurses... yes >checking for readline in -lreadline... yes >checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E >checking for sys/wait.h that is POSIX.1 compatible... yes >checking for restartable system calls... yes >checking for dlopen in -ldl... yes >checking for main in -llam... no >checking for sys/wait.h that is POSIX.1 compatible... (cached) yes >checking arpa/inet.h usability... yes >checking arpa/inet.h presence... yes >checking for arpa/inet.h... yes >checking ctype.h usability... yes >checking ctype.h presence... yes >checking for ctype.h... yes >checking direct.h usability... no >checking direct.h presence... no >checking for direct.h... no >checking dirent.h usability... yes >checking dirent.h presence... yes >checking for dirent.h... yes >checking dlfcn.h usability... yes >checking dlfcn.h presence... yes >checking for dlfcn.h... yes >checking errno.h usability... yes >checking errno.h presence... yes >checking for errno.h... yes >checking fcntl.h usability... yes >checking fcntl.h presence... yes >checking for fcntl.h... yes >checking fenv.h usability... yes >checking fenv.h presence... yes >checking for fenv.h... yes >checking fpu_control.h usability... yes >checking fpu_control.h presence... yes >checking for fpu_control.h... yes >checking ieeefp.h usability... no >checking ieeefp.h presence... no >checking for ieeefp.h... no >checking io.h usability... no >checking io.h presence... no >checking for io.h... no >checking limits.h usability... yes >checking limits.h presence... yes >checking for limits.h... yes >checking malloc.h usability... yes >checking malloc.h presence... yes >checking for malloc.h... yes >checking math.h usability... yes >checking math.h presence... yes >checking for math.h... yes >checking memory.h usability... yes >checking memory.h presence... yes >checking for memory.h... yes >checking mpi.h usability... no >checking mpi.h presence... no >checking for mpi.h... no >checking netdb.h usability... yes >checking netdb.h presence... yes >checking for netdb.h... yes >checking netinet/in.h usability... yes >checking netinet/in.h presence... yes >checking for netinet/in.h... yes >checking regex.h usability... yes >checking regex.h presence... yes >checking for regex.h... yes >checking siginfo.h usability... no >checking siginfo.h presence... no >checking for siginfo.h... no >checking signal.h usability... yes >checking signal.h presence... yes >checking for signal.h... yes >checking stdarg.h usability... yes >checking stdarg.h presence... yes >checking for stdarg.h... yes >checking string.h usability... yes >checking string.h presence... yes >checking for string.h... yes >checking stropts.h usability... yes >checking stropts.h presence... yes >checking for stropts.h... yes >checking sys/conf.h usability... no >checking sys/conf.h presence... no >checking for sys/conf.h... no >checking sys/file.h usability... yes >checking sys/file.h presence... yes >checking for sys/file.h... yes >checking sys/mman.h usability... yes >checking sys/mman.h presence... yes >checking for sys/mman.h... yes >checking sys/param.h usability... yes >checking sys/param.h presence... yes >checking for sys/param.h... yes >checking sys/resource.h usability... yes >checking sys/resource.h presence... yes >checking for sys/resource.h... yes >checking sys/select.h usability... yes >checking sys/select.h presence... yes >checking for sys/select.h... yes >checking sys/shm.h usability... yes >checking sys/shm.h presence... yes >checking for sys/shm.h... yes >checking sys/socket.h usability... yes >checking sys/socket.h presence... yes >checking for sys/socket.h... yes >checking sys/stat.h usability... yes >checking sys/stat.h presence... yes >checking for sys/stat.h... yes >checking sys/time.h usability... yes >checking sys/time.h presence... yes >checking for sys/time.h... yes >checking sys/times.h usability... yes >checking sys/times.h presence... yes >checking for sys/times.h... yes >checking sys/types.h usability... yes >checking sys/types.h presence... yes >checking for sys/types.h... yes >checking sys/ucontext.h usability... yes >checking sys/ucontext.h presence... yes >checking for sys/ucontext.h... yes >checking sys/un.h usability... yes >checking sys/un.h presence... yes >checking for sys/un.h... yes >checking time.h usability... yes >checking time.h presence... yes >checking for time.h... yes >checking unistd.h usability... yes >checking unistd.h presence... yes >checking for unistd.h... yes >checking wctype.h usability... yes >checking wctype.h presence... yes >checking for wctype.h... yes >checking winsock.h usability... no >checking winsock.h presence... no >checking for winsock.h... no >checking winsock2.h usability... no >checking winsock2.h presence... no >checking for winsock2.h... no >checking mach-o/dyld.h usability... no >checking mach-o/dyld.h presence... no >checking for mach-o/dyld.h... no >checking readline/readline.h usability... yes >checking readline/readline.h presence... yes >checking for readline/readline.h... yes >checking for mpi.h... (cached) no >checking mpe.h usability... no >checking mpe.h presence... no >checking for mpe.h... no >checking for inline... inline >checking whether struct tm is in sys/time.h or time.h... time.h >checking size of int *... 8 >checking size of short int... 2 >checking size of int... 4 >checking size of long int... 8 >checking size of long long int... 8 >checking size of float... 4 >checking size of double... 8 >checking for type of malloc... void * >checking for gcc inline... yes >checking for gcc threaded code... yes >checking for IEEE floats... yes >checking for sigsetjmp... yes >checking for sigsegv... yes >checking for sigprof... yes >checking for siginfo... yes >checking union wait... yes >checking environ... yes >checking return type of signal handlers... void >checking for acosh... yes >checking for asinh... yes >checking for atanh... yes >checking for chdir... yes >checking for ctime... yes >checking for dlopen... yes >checking for dup2... yes >checking for fesettrapenable... no >checking for fgetpos... yes >checking for finite... yes >checking for getcwd... yes >checking for getenv... yes >checking for gethostbyname... yes >checking for gethostid... yes >checking for gethostname... yes >checking for gethrtime... no >checking for getpwnam... yes >checking for getrusage... yes >checking for gettimeofday... yes >checking for getwd... yes >checking for isatty... yes >checking for isnan... yes >checking for kill... yes >checking for labs... yes >checking for link... yes >checking for lgamma... yes >checking for localtime... yes >checking for lstat... yes >checking for mallinfo... yes >checking for memcpy... yes >checking for memmove... yes >checking for mkstemp... yes >checking for mktemp... yes >checking for nanosleep... yes >checking for mktime... yes >checking for opendir... yes >checking for putenv... yes >checking for rand... yes >checking for random... yes >checking for readlink... yes >checking for regexec... yes >checking for rename... yes >checking for rint... yes >checking for rl_set_prompt... yes >checking for sbrk... yes >checking for select... yes >checking for setbuf... yes >checking for setitimer... yes >checking for setlinebuf... yes >checking for sigaction... yes >checking for siggetmask... yes >checking for siginterrupt... yes >checking for signal... yes >checking for sigprocmask... yes >checking for socket... yes >checking for stat... yes >checking for strchr... yes >checking for strerror... yes >checking for strncat... yes >checking for strncpy... yes >checking for strtod... yes >checking for time... yes >checking for times... yes >checking for tmpnam... yes >checking for usleep... yes >checking for vsnprintf... yes >checking for regexec... (cached) yes >checking for NSLinkModule... no >checking for alarm... yes >checking for mmap... yes >checking for popen... yes >checking for shmat... yes >checking for sleep... yes >checking for system... yes >checking for ttyname... yes >checking for waitpid... yes >checking for fetestexcept... yes >checking for snprintf... yes >checking for mpz_xor... no >checking if fflush(NULL) clobbers input pipes... no >no >configure: creating ./config.status >config.status: creating Makefile >config.status: creating library/matrix/Makefile >config.status: creating library/matlab/Makefile >config.status: creating library/regex/Makefile >config.status: creating library/system/Makefile >config.status: creating library/random/Makefile >config.status: creating library/yap2swi/Makefile >config.status: creating library/mpi/Makefile >config.status: creating .depend >config.status: creating library/Makefile >config.status: creating LGPL/Makefile >config.status: creating LGPL/chr/Makefile >config.status: creating LGPL/chr/chr_swi_bootstrap.yap >config.status: creating CLPBN/Makefile >config.status: creating LGPL/clp/Makefile >config.status: creating GPL/clpqr/Makefile >config.status: creating library/lammpi/Makefile >config.status: creating library/tries/Makefile >config.status: creating library/rltree/Makefile >config.status: creating LGPL/swi_console/Makefile >config.status: creating LGPL/JPL/Makefile >config.status: creating LGPL/JPL/src/Makefile >config.status: creating LGPL/JPL/java/Makefile >config.status: creating LGPL/JPL/jpl_paths.yap >config.status: creating GPL/http/Makefile >config.status: creating GPL/Makefile >config.status: creating cplint/Makefile >config.status: creating config.h >make -j10 >x86_64-pc-linux-gnu-gcc -c -O2 -pipe -shared -fPIC -DCOROUTINING=1 -DRATIONAL_TREES=1 -DDEPTH_LIMIT=1 -DCUT_C=1 -DHAVE_CONFIG_H -I. -I./H -I./OPTYap -I./BEAM -I./MYDDAS -I./include -DYAP_VERSION=\"Yap-5.1.3\" -DPL_SRC_DIR=\"/usr/share/Yap/pl/\" ./console/yap.c -o yap.o >x86_64-pc-linux-gnu-gcc -c -O2 -pipe -shared -fPIC -DCOROUTINING=1 -DRATIONAL_TREES=1 -DDEPTH_LIMIT=1 -DCUT_C=1 -DHAVE_CONFIG_H -I. -I./H -I./OPTYap -I./BEAM -I./MYDDAS ./C/agc.c -o agc.o >x86_64-pc-linux-gnu-gcc -c -O2 -pipe -shared -fPIC -DCOROUTINING=1 -DRATIONAL_TREES=1 -DDEPTH_LIMIT=1 -DCUT_C=1 -DHAVE_CONFIG_H -I. -I./H -I./OPTYap -I./BEAM -I./MYDDAS ./C/absmi.c -o absmi.o >x86_64-pc-linux-gnu-gcc -c -O2 -pipe -shared -fPIC -DCOROUTINING=1 -DRATIONAL_TREES=1 -DDEPTH_LIMIT=1 -DCUT_C=1 -DHAVE_CONFIG_H -I. -I./H -I./OPTYap -I./BEAM -I./MYDDAS ./C/adtdefs.c -o adtdefs.o >x86_64-pc-linux-gnu-gcc -c -O2 -pipe -shared -fPIC -DCOROUTINING=1 -DRATIONAL_TREES=1 -DDEPTH_LIMIT=1 -DCUT_C=1 -DHAVE_CONFIG_H -I. -I./H -I./OPTYap -I./BEAM -I./MYDDAS ./C/alloc.c -o alloc.o >x86_64-pc-linux-gnu-gcc -c -O2 -pipe -shared -fPIC -DCOROUTINING=1 -DRATIONAL_TREES=1 -DDEPTH_LIMIT=1 -DCUT_C=1 -DHAVE_CONFIG_H -I. -I./H -I./OPTYap -I./BEAM -I./MYDDAS ./C/amasm.c -o amasm.o >x86_64-pc-linux-gnu-gcc -c -O2 -pipe -shared -fPIC -DCOROUTINING=1 -DRATIONAL_TREES=1 -DDEPTH_LIMIT=1 -DCUT_C=1 -DHAVE_CONFIG_H -I. -I./H -I./OPTYap -I./BEAM -I./MYDDAS ./C/analyst.c -o analyst.o >x86_64-pc-linux-gnu-gcc -c -O2 -pipe -shared -fPIC -DCOROUTINING=1 -DRATIONAL_TREES=1 -DDEPTH_LIMIT=1 -DCUT_C=1 -DHAVE_CONFIG_H -I. -I./H -I./OPTYap -I./BEAM -I./MYDDAS ./C/arrays.c -o arrays.o >x86_64-pc-linux-gnu-gcc -c -O2 -pipe -shared -fPIC -DCOROUTINING=1 -DRATIONAL_TREES=1 -DDEPTH_LIMIT=1 -DCUT_C=1 -DHAVE_CONFIG_H -I. -I./H -I./OPTYap -I./BEAM -I./MYDDAS ./C/arith0.c -o arith0.o >x86_64-pc-linux-gnu-gcc -c -O2 -pipe -shared -fPIC -DCOROUTINING=1 -DRATIONAL_TREES=1 -DDEPTH_LIMIT=1 -DCUT_C=1 -DHAVE_CONFIG_H -I. -I./H -I./OPTYap -I./BEAM -I./MYDDAS ./C/arith1.c -o arith1.o >x86_64-pc-linux-gnu-gcc -c -O2 -pipe -shared -fPIC -DCOROUTINING=1 -DRATIONAL_TREES=1 -DDEPTH_LIMIT=1 -DCUT_C=1 -DHAVE_CONFIG_H -I. -I./H -I./OPTYap -I./BEAM -I./MYDDAS ./C/arith2.c -o arith2.o >./console/yap.c: In function 'do_bootfile': >./console/yap.c:206: warning: format not a string literal and no format arguments >In function 'strncat', > inlined from 'init_standard_system' at ./console/yap.c:616, > inlined from 'main' at ./console/yap.c:727: >/usr/include/bits/string3.h:153: warning: call to __builtin___strncat_chk might overflow destination buffer >In function 'strncat', > inlined from 'exec_top_level' at ./console/yap.c:680, > inlined from 'main' at ./console/yap.c:750: >/usr/include/bits/string3.h:153: warning: call to __builtin___strncat_chk might overflow destination buffer >x86_64-pc-linux-gnu-gcc -c -O2 -pipe -shared -fPIC -DCOROUTINING=1 -DRATIONAL_TREES=1 -DDEPTH_LIMIT=1 -DCUT_C=1 -DHAVE_CONFIG_H -I. -I./H -I./OPTYap -I./BEAM -I./MYDDAS ./C/attvar.c -o attvar.o >In function 'open', > inlined from 'ExtendWorkSpace' at ./C/alloc.c:945: >/usr/include/bits/fcntl2.h:51: error: call to '__open_missing_mode' declared with attribute error: open with O_CREAT in second argument needs 3 arguments >make: *** [alloc.o] Error 1 >make: *** Waiting for unfinished jobs.... > [31;01m*[0m > [31;01m*[0m ERROR: dev-lang/yap-5.1.3-r1 failed. > [31;01m*[0m Call stack: > [31;01m*[0m ebuild.sh, line 49: Called src_compile > [31;01m*[0m environment, line 4401: Called die > [31;01m*[0m The specific snippet of code: > [31;01m*[0m emake || die "emake failed"; > [31;01m*[0m The die message: > [31;01m*[0m emake failed > [31;01m*[0m > [31;01m*[0m If you need support, post the topmost build error, and the call stack if relevant. > [31;01m*[0m A complete build log is located at '/var/log/portage/dev-lang:yap-5.1.3-r1:20090222-021423.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/dev-lang/yap-5.1.3-r1/temp/environment'. > [31;01m*[0m This ebuild used the following eclasses from overlays: > [31;01m*[0m /usr/local/toolchain-overlay/eclass/toolchain-funcs.eclass > [31;01m*[0m
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bug 260180
: 183067