Config log file

config.R.log (text/plain), 19.50 KB, created by Fabien Fivaz on 2003-09-15 02:32:41 UTC

bash-2.05b# emerge -pv /usr/portage/dev-lang/R/R-1.7.1.ebuild

These are the packages that I would merge, in order:

Calculating dependencies ...done!
[ebuild     U ] dev-lang/R-1.7.1 [1.7.0] -atlas +X +tcltk +gnome

bash-2.05b# emerge /usr/portage/dev-lang/R/R-1.7.1.ebuild
Calculating dependencies ...done!
>>> emerge (1 of 1) dev-lang/R-1.7.1 to /
>>> md5 src_uri ;-) R-1.7.1.tgz
>>> Unpacking source...
>>> Unpacking R-1.7.1.tgz to /var/tmp/portage/R-1.7.1/work
>>> Source unpacked.
configure: WARNING: If you wanted to set the --build type, don't use --host.
    If a cross compiler is detected then cross compile mode will be used.
checking for a BSD-compatible install... /bin/install -c
checking whether build environment is sane... yes
checking whether make sets $(MAKE)... yes
checking for working aclocal-1.4... found
checking for working autoconf... found
checking for working automake-1.4... found
checking for working autoheader... found
checking for working makeinfo... found
checking build system type... i686-pc-linux-gnu
checking host system type... i686-pc-linux-gnu
loading site script './config.site'
loading build specific script './config.site'
checking for pwd... /bin/pwd
checking whether builddir is srcdir... yes
checking for gawk... gawk
checking for egrep... grep -E
checking whether ln -s works... yes
checking for i686-pc-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking for bison... bison -y
checking for ar... ar
checking for javac... /opt/blackdown-jdk-1.4.1/bin/javac
checking for /usr/bin/less... /usr/bin/less
checking for perl... /usr/bin/perl
checking whether perl version is at least 5.004... yes
checking for dvips... /usr/bin/dvips
checking for tex... /usr/bin/tex
checking for latex... /usr/bin/latex
checking for makeindex... /usr/bin/makeindex
checking for pdftex... /usr/bin/pdftex
checking for pdflatex... /usr/bin/pdflatex
checking for makeinfo... /usr/bin/makeinfo
checking for unzip... /usr/bin/unzip
checking for zip... /usr/bin/zip
checking for i686-pc-linux-gnu-gcc... gcc
checking for C compiler default output... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for ld used by GCC... /usr/i686-pc-linux-gnu/bin/ld
checking if the linker (/usr/i686-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for /usr/i686-pc-linux-gnu/bin/ld option to reload object files... -r
checking for BSD-compatible nm... nm
checking for a sed that does not truncate output... /bin/sed
checking how to recognise dependent libraries... pass_all
checking command to parse nm output... ok
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking for i686-pc-linux-gnu-ranlib... ranlib
checking for i686-pc-linux-gnu-strip... no
checking for strip... strip
checking for objdir... .libs
checking for gcc option to produce PIC... -fPIC
checking if gcc PIC flag -fPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.lo... yes
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking whether the linker (/usr/i686-pc-linux-gnu/bin/ld) supports shared libraries... yes
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking whether -lc should be explicitly linked in... no
creating libtool
checking whether makeinfo version is at least 4... yes
checking for netscape... no
checking for mozilla... /usr/bin/mozilla
using default browser ... /usr/bin/mozilla
checking for acroread... no
checking for acroread4... no
checking for xpdf... /usr/bin/xpdf
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to accept ANSI C... (cached) none needed
checking whether gcc needs -traditional... no
checking how to run the C preprocessor... gcc -E
checking for g77... g77
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether g77 accepts -g... yes
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking how to run the C++ preprocessor... g++ -E
checking for main in -lm... yes
checking for sin in -lm... yes
checking for main in -lncurses... yes
checking for dlopen in -ldl... yes
checking for rl_callback_read_char in -lreadline... yes
checking for ANSI C header files... (cached) yes
checking whether time.h and sys/time.h may both be included... yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for sys/wait.h that is POSIX.1 compatible... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking dl.h usability... no
checking dl.h presence... no
checking for dl.h... no
checking for dlfcn.h... (cached) yes
checking elf.h usability... yes
checking elf.h presence... yes
checking for elf.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking floatingpoint.h usability... no
checking floatingpoint.h presence... no
checking for floatingpoint.h... no
checking fpu_control.h usability... yes
checking fpu_control.h presence... yes
checking for fpu_control.h... yes
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking ieee754.h usability... yes
checking ieee754.h presence... yes
checking for ieee754.h... yes
checking ieeefp.h usability... no
checking ieeefp.h presence... no
checking for ieeefp.h... no
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking readline/history.h usability... yes
checking readline/history.h presence... yes
checking for readline/history.h... yes
checking readline/readline.h usability... yes
checking readline/readline.h presence... yes
checking for readline/readline.h... yes
checking for strings.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for sys/stat.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/times.h usability... yes
checking sys/times.h presence... yes
checking for sys/times.h... yes
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking for unistd.h... (cached) yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking for string.h... (cached) yes
checking whether setjmp.h is POSIX.1 compatible... yes
checking for GNU C library with version >= 2... yes
checking return type of signal handlers... void
checking for pid_t... yes
checking for size_t... yes
checking for blkcnt_t... yes
checking for type of socket length... socklen_t *
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for int... yes
checking size of int... 4
checking for long... yes
checking size of long... 4
checking for long long... yes
checking size of long long... 8
checking for long double... yes
checking size of long double... 12
checking whether we can compute C Make dependencies... yes, using gcc -MM
checking whether gcc supports -c -o FILE.lo... yes
checking how to get verbose linking output from g77... -v
checking for Fortran 77 libraries...  -L/usr/local/lib -L/usr/lib/gcc-lib/i686-pc-linux-gnu/3.2.3 -L/usr/lib/gcc-lib/i686-pc-linux-gnu/3.2.3/../../../../i686-pc-linux-gnu/lib -L/usr/lib/gcc-lib/i686-pc-linux-gnu/3.2.3/../../.. -lfrtbegin -lg2c -lm -lgcc_s
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, extra underscore
checking whether g77 appends underscores to external names... yes
checking whether mixed C/Fortran code can be run... yes
checking whether g77 and gcc agree on int and double... yes
checking whether g77 and gcc agree on double complex... yes
checking whether g77 supports -c -o FILE.lo... yes
checking whether g++ accepts -M for generating dependencies... yes
checking whether g++ supports -c -o FILE.lo... yes
checking whether gcc accepts -mieee-fp... yes
checking whether g77 accepts -mieee-fp... yes
checking whether g++ accepts -mieee-fp... yes
checking for xmkmf... /usr/X11R6/bin/xmkmf
checking for working alloca.h... yes
checking for alloca... yes
checking for access... yes
checking for chdir... yes
checking for expm1... yes
checking for fcntl... yes
checking for finite... yes
checking for ftruncate... yes
checking for getcwd... yes
checking for getgrgid... yes
checking for getpwuid... yes
checking for getuid... yes
checking for hypot... yes
checking for isascii... yes
checking for isnan... yes
checking for log1p... yes
checking for matherr... yes
checking for mkfifo... yes
checking for popen... yes
checking for putenv... yes
checking for rint... yes
checking for setenv... yes
checking for strcoll... yes
checking for stat... yes
checking for strptime... yes
checking for symlink... yes
checking for system... yes
checking for times... yes
checking for unsetenv... yes
checking for acosh... yes
checking for asinh... yes
checking for atanh... yes
checking for snprintf... yes
checking for strdup... yes
checking for strncasecmp... yes
checking for vsnprintf... yes
checking whether acosh is declared... yes
checking whether asinh is declared... yes
checking whether atanh is declared... yes
checking whether snprintf is declared... yes
checking whether strdup is declared... yes
checking whether strncasecmp is declared... yes
checking whether vsnprintf is declared... yes
checking for library containing connect... none required
checking for library containing gethostbyname... none required
checking for library containing xdr_string... none required
checking for __setfpucw... no
checking for working calloc... yes
checking for working finite... yes
checking for working log... yes
checking for working strptime... yes
checking for X... libraries /usr/X11R6/lib, headers /usr/X11R6/include
checking for gethostbyname... yes
checking for connect... yes
checking for remove... yes
checking for shmat... yes
checking for IceConnectionNumber in -lICE... yes
checking for gnome-config... /usr/bin/gnome-config
checking if /usr/bin/gnome-config works... yes
checking for orbit-config... /usr/bin/orbit-config
checking for orbit-idl... /usr/bin/orbit-idl
checking for working ORBit environment... yes
checking for gnorba libraries... yes
checking for libglade-config... /usr/bin/libglade-config
checking for libglade... yes
checking for /usr/lib/tclConfig.sh... /usr/lib/tclConfig.sh
checking for /usr/lib/tclConfig.sh... /usr/lib/tclConfig.sh
./configure: line 22909: test: -lt: unary operator expected
./configure: line 22919: test: 8: unary operator expected
./configure: line 22920: test: 3: unary operator expected
checking /usr/include/tcl8.3/generic/tcl.h usability... no
checking /usr/include/tcl8.3/generic/tcl.h presence... no
checking for /usr/include/tcl8.3/generic/tcl.h... no
checking /usr/include/tcl8.3/tcl.h usability... no
checking /usr/include/tcl8.3/tcl.h presence... no
checking for /usr/include/tcl8.3/tcl.h... no
checking /usr/include/tcl.h usability... yes
checking /usr/include/tcl.h presence... yes
checking for /usr/include/tcl.h... yes
checking /include/tk/generic/tk.h usability... no
checking /include/tk/generic/tk.h presence... no
checking for /include/tk/generic/tk.h... no
checking /include/tk/tk.h usability... no
checking /include/tk/tk.h presence... no
checking for /include/tk/tk.h... no
checking /include/tcl/tk.h usability... no
checking /include/tcl/tk.h presence... no
checking for /include/tcl/tk.h... no
checking /include/tk.h usability... no
checking /include/tk.h presence... no
checking for /include/tk.h... no
checking for tk.h... yes
checking for finite... (cached) yes
checking for isnan... (cached) yes
checking whether isfinite is declared... no
checking whether isnan is declared... yes
checking whether you have IEEE 754 floating-point arithmetic... yes
checking for BSD networking... yes
checking if jpeglib version >= 6b... yes
checking for jpeg_destroy_compress in -ljpeg... yes
checking for main in -lz... yes
checking if libpng version >= 1.0.5... yes
checking for png_create_write_struct in -lpng... yes
checking rpc/types.h usability... yes
checking rpc/types.h presence... yes
checking for rpc/types.h... yes
checking for rpc/xdr.h... yes
checking for XDR support... yes
checking for gzeof in -lz... yes
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
checking if zlib version >= 1.1.3... yes
checking whether zlib support needs to be compiled... no
checking for BZ2_bzlibVersion in -lbz2... yes
checking bzlib.h usability... yes
checking bzlib.h presence... yes
checking for bzlib.h... yes
checking whether bzip2 support needs to be compiled... no
checking for pcre_fullinfo in -lpcre... yes
checking pcre.h usability... yes
checking pcre.h presence... yes
checking for pcre.h... yes
checking pcre/pcre.h usability... no
checking pcre/pcre.h presence... no
checking for pcre/pcre.h... no
checking whether PCRE support needs to be compiled... no
checking whether leap seconds are treated according to POSIX... yes
checking for setitimer... yes
checking for lpr... lpr
checking for paperconf... false
checking for recommended packages... yes
configure: creating ./config.status
config.status: creating Makeconf
config.status: creating Makefile
config.status: creating afm/Makefile
config.status: creating doc/Makefile
config.status: creating doc/html/Makefile
config.status: creating doc/html/search/Makefile
config.status: creating doc/manual/Makefile
config.status: creating etc/Makefile
config.status: creating etc/Makeconf
config.status: creating etc/Renviron
config.status: creating m4/Makefile
config.status: creating share/Makefile
config.status: creating src/Makefile
config.status: creating src/appl/Makefile
config.status: creating src/extra/Makefile
config.status: creating src/extra/bzip2/Makefile
config.status: creating src/extra/pcre/Makefile
config.status: creating src/extra/xdr/Makefile
config.status: creating src/extra/zlib/Makefile
config.status: creating src/include/Makefile
config.status: creating src/include/Rmath.h0
config.status: creating src/include/R_ext/Makefile
config.status: creating src/library/Recommended/Makefile
config.status: creating src/library/Makefile
config.status: creating src/library/base/DESCRIPTION
config.status: creating src/library/base/Makefile
config.status: creating src/library/ctest/DESCRIPTION
config.status: creating src/library/ctest/Makefile
config.status: creating src/library/ctest/src/Makefile
config.status: creating src/library/eda/DESCRIPTION
config.status: creating src/library/eda/Makefile
config.status: creating src/library/eda/src/Makefile
config.status: creating src/library/lqs/DESCRIPTION
config.status: creating src/library/lqs/Makefile
config.status: creating src/library/lqs/src/Makefile
config.status: creating src/library/methods/DESCRIPTION
config.status: creating src/library/methods/Makefile
config.status: creating src/library/methods/src/Makefile
config.status: creating src/library/modreg/DESCRIPTION
config.status: creating src/library/modreg/Makefile
config.status: creating src/library/modreg/src/Makefile
config.status: creating src/library/mva/DESCRIPTION
config.status: creating src/library/mva/Makefile
config.status: creating src/library/mva/src/Makefile
config.status: creating src/library/nls/DESCRIPTION
config.status: creating src/library/nls/Makefile
config.status: creating src/library/nls/src/Makefile
config.status: creating src/library/profile/Makefile
config.status: creating src/library/stepfun/DESCRIPTION
config.status: creating src/library/stepfun/Makefile
config.status: creating src/library/splines/DESCRIPTION
config.status: creating src/library/splines/Makefile
config.status: creating src/library/splines/src/Makefile
config.status: creating src/library/tcltk/DESCRIPTION
config.status: creating src/library/tcltk/Makefile
config.status: creating src/library/tcltk/src/Makefile
config.status: creating src/library/tools/DESCRIPTION
config.status: creating src/library/tools/Makefile
config.status: creating src/library/tools/src/Makefile
config.status: creating src/library/ts/DESCRIPTION
config.status: creating src/library/ts/Makefile
config.status: creating src/library/ts/src/Makefile
config.status: creating src/main/Makefile
config.status: creating src/modules/Makefile
config.status: creating src/modules/X11/Makefile
config.status: creating src/modules/aqua/Makefile
config.status: creating src/modules/gnome/Makefile
config.status: creating src/modules/internet/Makefile
config.status: creating src/modules/lapack/Makefile
config.status: creating src/modules/vfonts/Makefile
config.status: creating src/nmath/Makefile
config.status: creating src/nmath/standalone/Makefile
config.status: creating src/scripts/Makefile
config.status: creating src/scripts/COMPILE
config.status: creating src/scripts/INSTALL
config.status: creating src/scripts/REMOVE
config.status: creating src/scripts/R.sh
config.status: creating src/scripts/Rdconv
config.status: creating src/scripts/Rdindex
config.status: creating src/scripts/Rprof
config.status: creating src/scripts/SHLIB
config.status: creating src/scripts/Sd2Rd
config.status: creating src/scripts/build
config.status: creating src/scripts/check
config.status: creating src/scripts/f77
config.status: creating src/unix/Makefile
config.status: creating tests/Makefile
config.status: creating tests/Embedding/Makefile
config.status: creating tests/Examples/Makefile
config.status: creating tests/Native/Makefile
config.status: creating tools/Makefile
config.status: creating src/include/config.h
config.status: executing stamp-h commands

R is now configured for i686-pc-linux-gnu

  Source directory:          .
  Installation directory:    /usr

  C compiler:                gcc -D__NO_MATH_INLINES -mieee-fp -march=pentium4 -O3 -pipe -fomit-frame-pointer
  C++ compiler:              g++ -mieee-fp -march=pentium4 -O3 -pipe -fomit-frame-pointer
  Fortran compiler:          g77 -mieee-fp -g -O2

  Interfaces supported:      X11, gnome
  External libraries:        readline
  Additional capabilities:   PNG, JPEG, bzip2, PCRE
  Options enabled:           shared library, R profiling

  Recommended packages:      yes