--- src/Foundation/ConfigFile.cc.orig	2008-06-16 18:12:13.000000000 +0000
+++ src/Foundation/ConfigFile.cc.orig	2008-06-16 18:12:28.000000000 +0000
@@ -35,6 +35,8 @@ 
 
 #include "ConfigFile.hh"
 
+#include <cstring>
+
 //! Constructor
 /*! Creates a ConfigFile class. Also loads, parses, and resolves
  *  variable substitution.
--- src/Foundation/Logger.cc.orig	2008-06-16 18:13:45.000000000 +0000
+++ src/Foundation/Logger.cc.orig	2008-06-16 18:14:03.000000000 +0000
@@ -58,6 +58,8 @@ 
  */
 
 #include "Logger.hh"
+#include <cstdlib>
+
 
 //! Sets default values for class
 /*! Note: Log is disabled until a filter level is set\n
--- src/Foundation/OptionResult.cc.orig	2008-06-16 18:15:41.000000000 +0000
+++ src/Foundation/OptionResult.cc.orig	2008-06-16 18:15:51.000000000 +0000
@@ -9,6 +9,8 @@ 
 //! @brief OptionResult class implementation
 
 #include "OptionResult.hh"
+#include <cstdlib>
+
 
 //! Sets defaults for all results
 OptionResult::OptionResult(const std::string & optionHelp)
--- src/Foundation/Options.cc.orig	2008-06-16 18:17:01.000000000 +0000
+++ src/Foundation/Options.cc.orig	2008-06-16 18:17:11.000000000 +0000
@@ -26,6 +26,8 @@ 
  */
 
 #include "Options.hh"
+#include <cstring>
+
 
 //! Constructor takes command line options in standard argc, argv format
 /*! Initializes application name, filespec, and invocation
--- src/Align/missing-reads.cc.orig	2008-06-16 18:22:21.000000000 +0000
+++ src/Align/missing-reads.cc.orig	2008-06-16 18:22:34.000000000 +0000
@@ -9,6 +9,8 @@ 
 #include  <vector>
 #include  <algorithm>
 #include  <cassert>
+#include  <cstring>
+
 using namespace std;
 
 const int  MAX_LINE = 1000;
--- src/Utils/runAmos.cc.orig	2008-06-16 18:30:30.000000000 +0000
+++ src/Utils/runAmos.cc.orig	2008-06-16 18:30:42.000000000 +0000
@@ -18,6 +18,8 @@ 
 #include <dirent.h>
 #include <fcntl.h>
 #include <iostream>
+#include <cstdlib>
+
 
 #define MAX_STRING 256         // length of various char*s in file
 
--- src/bankViewer/HistogramWindow.cc.orig	2008-06-16 18:36:40.000000000 +0000
+++ src/bankViewer/HistogramWindow.cc.orig	2008-06-16 18:37:04.000000000 +0000
@@ -1,6 +1,8 @@ 
 #include "HistogramWindow.hh"
 #include "HistogramWidget.hh"
 #include "InsertStats.hh"
+#include <cstdlib>
+
 
 #include <qspinbox.h>
 #include <qcheckbox.h>