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Line
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| 0 |
-- a/align/Amap.cc |
0 |
++ b/align/Amap.cc |
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Lines 12-17
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| 12 |
#include "ProbabilisticModel.h" |
12 |
#include "ProbabilisticModel.h" |
| 13 |
#include "EvolutionaryTree.h" |
13 |
#include "EvolutionaryTree.h" |
| 14 |
#include "SparseMatrix.h" |
14 |
#include "SparseMatrix.h" |
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|
15 |
#include <limits> |
| 16 |
#include <climits> |
| 15 |
#include <string> |
17 |
#include <string> |
| 16 |
#include <sstream> |
18 |
#include <sstream> |
| 17 |
#include <iomanip> |
19 |
#include <iomanip> |
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Lines 23-28
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| 23 |
#include <cstdlib> |
25 |
#include <cstdlib> |
| 24 |
#include <cerrno> |
26 |
#include <cerrno> |
| 25 |
#include <iomanip> |
27 |
#include <iomanip> |
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|
28 |
#include <cstring> |
| 26 |
|
29 |
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| 27 |
string parametersInputFilename = ""; |
30 |
string parametersInputFilename = ""; |
| 28 |
string parametersOutputFilename = "no training"; |
31 |
string parametersOutputFilename = "no training"; |
| 29 |
-- a/align/MultiSequenceDag.h |
32 |
++ b/align/MultiSequenceDag.h |
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Lines 13-18
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| 13 |
#include <map> |
13 |
#include <map> |
| 14 |
#include <queue> |
14 |
#include <queue> |
| 15 |
#include <iostream> |
15 |
#include <iostream> |
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|
16 |
#include <limits> |
| 16 |
#include "MultiSequence.h" |
17 |
#include "MultiSequence.h" |
| 17 |
#include "SparseMatrix.h" |
18 |
#include "SparseMatrix.h" |
| 18 |
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19 |
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