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Gentoo's Bugzilla – Attachment 146277 Details for
Bug 155424
[science overlay] sci-mathematics/netgen-4.4.ebuild (New package)
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[patch]
Patch inspired by what Debian did with salome. Up to the so called 4.4-9 release
debian-inspired-netgen_4.4-9.patch (text/plain), 9.54 KB, created by
Daniel Tourde - Caelae.se
on 2008-03-16 10:07:30 UTC
(
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Description:
Patch inspired by what Debian did with salome. Up to the so called 4.4-9 release
Filename:
MIME Type:
Creator:
Daniel Tourde - Caelae.se
Created:
2008-03-16 10:07:30 UTC
Size:
9.54 KB
patch
obsolete
>--- ./ngsolve/basiclinalg/calcinverse.cpp >+++ ./ngsolve/basiclinalg/calcinverse.cpp >@@ -9,7 +9,7 @@ > { > double sum = 0; > for (int i = 0; i < N; i++) >- sum += abs(m(i,i)); >+ sum += std::abs(m(i,i)); > return sum; > } > inline double abs (double a) >--- ./ng.tcl >+++ ./ng.tcl >@@ -7,7 +7,7 @@ > > set progname "NETGEN" > >-set ngdir "" >+set ngdir "/usr/share/netgen" > if { [lsearch [array names env] NETGENDIR] != -1 } { > set ngdir $env(NETGENDIR) > } >--- ./togl/LICENSE.togl >+++ ./togl/LICENSE.togl >@@ -0,0 +1,27 @@ >+This software is copyrighted by Brian Paul (brian@mesa3d.org) >+and Benjamin Bederson (bederson@cs.umd.edu). The following >+terms apply to all files associated with the software unless explicitly >+disclaimed in individual files. >+ >+The authors hereby grant permission to use, copy, modify, distribute, >+and license this software and its documentation for any purpose, provided >+that existing copyright notices are retained in all copies and that this >+notice is included verbatim in any distributions. No written agreement, >+license, or royalty fee is required for any of the authorized uses. >+Modifications to this software may be copyrighted by their authors >+and need not follow the licensing terms described here, provided that >+the new terms are clearly indicated on the first page of each file where >+they apply. >+ >+IN NO EVENT SHALL THE AUTHORS OR DISTRIBUTORS BE LIABLE TO ANY PARTY >+FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES >+ARISING OUT OF THE USE OF THIS SOFTWARE, ITS DOCUMENTATION, OR ANY >+DERIVATIVES THEREOF, EVEN IF THE AUTHORS HAVE BEEN ADVISED OF THE >+POSSIBILITY OF SUCH DAMAGE. >+ >+THE AUTHORS AND DISTRIBUTORS SPECIFICALLY DISCLAIM ANY WARRANTIES, >+INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, >+FITNESS FOR A PARTICULAR PURPOSE, AND NON-INFRINGEMENT. THIS SOFTWARE >+IS PROVIDED ON AN "AS IS" BASIS, AND THE AUTHORS AND DISTRIBUTORS HAVE >+NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, UPDATES, ENHANCEMENTS, OR >+MODIFICATIONS. >--- ./togl/license.terms >+++ ./togl/license.terms >@@ -0,0 +1,39 @@ >+This software is copyrighted by the Regents of the University of >+California, Sun Microsystems, Inc., Scriptics Corporation, >+and other parties. The following terms apply to all files associated >+with the software unless explicitly disclaimed in individual files. >+ >+The authors hereby grant permission to use, copy, modify, distribute, >+and license this software and its documentation for any purpose, provided >+that existing copyright notices are retained in all copies and that this >+notice is included verbatim in any distributions. No written agreement, >+license, or royalty fee is required for any of the authorized uses. >+Modifications to this software may be copyrighted by their authors >+and need not follow the licensing terms described here, provided that >+the new terms are clearly indicated on the first page of each file where >+they apply. >+ >+IN NO EVENT SHALL THE AUTHORS OR DISTRIBUTORS BE LIABLE TO ANY PARTY >+FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES >+ARISING OUT OF THE USE OF THIS SOFTWARE, ITS DOCUMENTATION, OR ANY >+DERIVATIVES THEREOF, EVEN IF THE AUTHORS HAVE BEEN ADVISED OF THE >+POSSIBILITY OF SUCH DAMAGE. >+ >+THE AUTHORS AND DISTRIBUTORS SPECIFICALLY DISCLAIM ANY WARRANTIES, >+INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, >+FITNESS FOR A PARTICULAR PURPOSE, AND NON-INFRINGEMENT. THIS SOFTWARE >+IS PROVIDED ON AN "AS IS" BASIS, AND THE AUTHORS AND DISTRIBUTORS HAVE >+NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, UPDATES, ENHANCEMENTS, OR >+MODIFICATIONS. >+ >+GOVERNMENT USE: If you are acquiring this software on behalf of the >+U.S. government, the Government shall have only "Restricted Rights" >+in the software and related documentation as defined in the Federal >+Acquisition Regulations (FARs) in Clause 52.227.19 (c) (2). If you >+are acquiring the software on behalf of the Department of Defense, the >+software shall be classified as "Commercial Computer Software" and the >+Government shall have only "Restricted Rights" as defined in Clause >+252.227-7013 (c) (1) of DFARs. Notwithstanding the foregoing, the >+authors grant the U.S. Government and others acting in its behalf >+permission to use and distribute the software in accordance with the >+terms specified in this license. >--- ./ngtcltk/ngappinit.cpp >+++ ./ngtcltk/ngappinit.cpp >@@ -77,7 +77,7 @@ > if (getenv ("NETGENDIR") && strlen (getenv ("NETGENDIR"))) > ngdir = getenv ("NETGENDIR"); > else >- ngdir = "."; >+ ngdir = "/usr/share/netgen"; > > verbose = parameters.GetDefineFlag ("V"); > >--- ./ngtcltk/nghelp.tcl >+++ ./ngtcltk/nghelp.tcl >@@ -1,6 +1,6 @@ > proc print_commandline_help { } { > >- puts "Usage: ng { options }" >+ puts "Usage: netgen { options }" > > puts "-geofile=filename Input geometry file (alternative: ng filename)" > puts "-meshfile=filename Output mesh file" >--- ./libsrc/visualization/mvdraw.hpp >+++ ./libsrc/visualization/mvdraw.hpp >@@ -250,6 +250,7 @@ > int seltria; > }; > >+extern VisualSceneSTLMeshing vsstlmeshing; > > > >--- ./ngsolve/comp/postproc.cpp >+++ ./ngsolve/comp/postproc.cpp >@@ -9,6 +9,7 @@ > */ > > #include <comp.hpp> >+#include <fem.hpp> > > namespace ngcomp > { >@@ -274,8 +275,8 @@ > if (dimflux > 1) > { > FlatMatrix<SCAL> elmat(dnumsflux.Size(), lh); >- dynamic_cast<const BlockBilinearFormIntegrator&> (fluxbli) >- . Block() . AssembleElementMatrix (felflux, eltrans, elmat, lh); >+ BlockBilinearFormIntegrator const& fluxbli_ref = dynamic_cast<const BlockBilinearFormIntegrator&> (fluxbli); >+ fluxbli_ref . Block() . AssembleElementMatrix (felflux, eltrans, elmat, lh); > CholeskyFactors<SCAL> invelmat(elmat); > > FlatVector<SCAL> hv1(dnumsflux.Size(), lh); >--- ./ngsolve/linalg/order.cpp >+++ ./ngsolve/linalg/order.cpp >@@ -54,7 +54,7 @@ > return ball.Alloc(); > } > >- void CliqueEl :: operator delete (void * p, size_t) >+ void CliqueEl :: operator delete (void * p) > { > ball.Free (p); > } >--- ./ngsolve/linalg/order.hpp >+++ ./ngsolve/linalg/order.hpp >@@ -118,7 +118,7 @@ > /// > void * operator new(size_t); > /// >- void operator delete (void *, size_t); >+ void operator delete (void *); > }; > > >--- ./ngsolve/basiclinalg/expr3.hpp >+++ ./ngsolve/basiclinalg/expr3.hpp >@@ -851,6 +851,16 @@ > /** > Inner product > */ >+inline double InnerProduct ( const double& a, const double& b ) >+{ >+ return a * b; >+} >+ >+inline Complex InnerProduct ( const Complex& a, const Complex b) >+{ >+ return a * b; >+} >+ > template <class TA, class TB> > inline typename TA::TSCAL > InnerProduct (const MatExpr<TA> & a, const MatExpr<TB> & b) >@@ -862,15 +872,6 @@ > return sum; > } > >-inline double InnerProduct (double a, double b) >-{ >- return a * b; >-} >- >-inline Complex InnerProduct (Complex a, Complex b) >-{ >- return a * b; >-} > > > /* **************************** Trace **************************** */ >@@ -889,6 +890,16 @@ > /* **************************** L2Norm **************************** */ > > /// Euklidean norm squared >+inline double L2Norm2 (const double& v) >+{ >+ return v*v; >+} >+ >+inline double L2Norm2 (Complex v) >+{ >+ return v.real()*v.real()+v.imag()*v.imag(); >+} >+ > template <class TA> > inline double L2Norm2 (const MatExpr<TA> & v) > { >@@ -899,17 +910,6 @@ > return sum; > } > >- >-inline double L2Norm2 (double v) >-{ >- return v*v; >-} >- >-inline double L2Norm2 (Complex v) >-{ >- return v.real()*v.real()+v.imag()*v.imag(); >-} >- > template <class TA> > inline double L2Norm (const MatExpr<TA> & v) > { >--- ./Makefile >+++ ./Makefile >@@ -29,7 +29,7 @@ > # tcltklib = -ltix8.2 -ltk8.4 -ltcl8.4 > # > # >-syslib = $(tcltklib) -lGL -lGLU -lX11 -lXi -lm -ldl -lpthread $(SYSLIB2) >+syslib = $(tcltklib) -lGL -lGLU -lX11 -lm -ldl -lpthread $(SYSLIB2) > # (maybe you have to remove -ldl) > # > # >@@ -49,6 +49,7 @@ > > # add libs in makefile.mach.$(MACHINE) > # occlib = -L$(OCCLIB_DIR) -lTKIGES -lTKBRep -lTKSTEP -lTKSTL >+occlib = -L$(OCCLIB_DIR) -lTKIGES -lTKBRep -lTKSTEP -lTKSTL -lTKTopAlgo -lTKG3d -lTKG2d -lTKXSBase -lTKOffset -lTKFillet -lTKGeomBase -lTKGeomAlgo -lTKShHealing -lTKBO -lTKPrim -lTKernel -lTKMath -lTKBool -lXxf86vm > # > include $(LIBSRC_DIR)/makefile.mach.$(MACHINE) > # >@@ -117,7 +120,7 @@ > # > .PHONY : clean > clean: >- -@rm *.o ngtcltk/*.o togl/*.o lib/$(MACHINE)/lib*.a lib/$(MACHINE)/*.o >+ -rm *.o ngtcltk/*.o togl/*.o lib/$(MACHINE)/lib*.a lib/$(MACHINE)/*.o ng > # > # > .PHONY : cleanapp >--- ./libsrc/makefile.mach.LINUX >+++ ./libsrc/makefile.mach.LINUX >@@ -16,12 +16,18 @@ > # > CFLAGS2 = > >-CPLUSPLUSFLAGS2 = -O2 -I/usr/include/GL3.5 -DLINUX -DOPENGL \ >- -ftemplate-depth-99 -finline-limit=20000 \ >+CPLUSPLUSFLAGS2 = -O2 -I/usr/include/GL -I/usr/include/tcl8.4 -I/usr/include/tk8.4 -I/usr/X11R6/include \ >+ -DLINUX -DOPENGL \ >+ -finline-limit=20000 \ > -funroll-loops -DNGSOLVE > > LINKFLAGS2 = -L/usr/openwin/lib -L/usr/X11R6/lib -L/usr/lib/GL3.5 -lstdc++ > >+OCC_DIR=/opt/OpenCASCADE5.2 >+OCCINC_DIR=$(OCC_DIR)/ros/inc >+OCCLIB_DIR=$(OCC_DIR)/ros/lin/lib >+CPLUSPLUSFLAGS2 += -DOCCGEOMETRY -DOCC52 -DUSE_STL_STREAM -DHAVE_IOSTREAM -DHAVE_LIMITS -I$(OCCINC_DIR) >+LINKFLAGS2 += -L$(OCCLIB_DIR) -lTKIGES -lTKBRep -lTKSTEP -lTKSTL -lTKTopAlgo -lTKG3d -lTKG2d -lTKXSBase -lTKOffset -lTKFillet -lTKGeomBase -lTKGeomAlgo -lTKShHealing -lTKBO -lTKPrim -lTKernel -lTKMath -lTKBool > > goalngs=goalngs > >--- ./ngsolve/solve/shapetester.cpp >+++ ./ngsolve/solve/shapetester.cpp >@@ -1,6 +1,7 @@ > > #include <solve.hpp> > // #include <nginterface.h> >+#include <cstdlib> > > > namespace ngsolve >--- ./ngsolve/comp/fespace.cpp >+++ ./ngsolve/comp/fespace.cpp >@@ -10,6 +10,8 @@ > > #include <comp.hpp> > #include <multigrid.hpp> >+#include <cstdlib> >+ > using namespace ngmg; > > namespace ngcomp
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