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Gentoo's Bugzilla – Attachment 143099 Details for
Bug 201321
sci-mathematics/sage (new ebuild)
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2.10.1 ebuild revision to include gmp patch
sage-2.10.1-r1.ebuild (text/plain), 4.30 KB, created by
François Bissey
on 2008-02-10 08:36:58 UTC
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Description:
2.10.1 ebuild revision to include gmp patch
Filename:
MIME Type:
Creator:
François Bissey
Created:
2008-02-10 08:36:58 UTC
Size:
4.30 KB
patch
obsolete
># Copyright 1999-2006 Gentoo Foundation ># Distributed under the terms of the GNU General Public License v2 ># $Header: $ > >DESCRIPTION="number theory and algebraic geometry software" >HOMEPAGE="http://modular.math.washington.edu/sage/" >SRC_URI="http://modular.math.washington.edu/sage/dist/src/${P}.tar" > >inherit eutils flag-o-matic fortran > >LICENSE="GPL-2" >SLOT="0" >KEYWORDS="~x86 ~ppc ~amd64 ~ppc64" >IUSE="" > >DEPEND="sys-devel/flex > dev-lang/perl > || (sys-devel/bison dev-util/yacc) > app-arch/bzip2 > sys-libs/readline > sys-libs/zlib > >=net-libs/gnutls-2.2.1 > >=media-libs/libpng-1.2.22 > >=media-libs/freetype-2.3.5 > >=sci-libs/gsl-1.10 > >=sci-libs/blas-atlas-3.8.0 > >=sci-libs/lapack-atlas-3.8.0 > >=dev-db/sqlite-3 > media-libs/gd > =sci-mathematics/maxima-5.13.0-r1" > >RDEPEND=">=virtual/jre-1.4 > ${DEPEND}" > ># linbox doesn't configure properly with -Wl,--as-needed so I zap it. >filter-ldflags -Wl,--as-needed ># lcalc has problem with some optimizations enabled by -march=native on an athlon-4. ># Until we can find what exactly is wrong, I filter all -march= setting. ># I'll be glad if someone can point to a better way to do it or which which flag to suppress. ># The error is : ># /scratch/portage/sci-mathematics/sage-2.9.1.1/temp/ccHexhRT.o: In function `__exchange_and_add': ># /usr/lib/gcc/i686-pc-linux-gnu/4.2.2/include/g++-v4/ext/atomicity.h:51: undefined reference to `__sync_fetch_and_add_4' ># >ARCHFLAG=$(get-flag -march) >filter-flags ${ARCHFLAG} > >####################################################### ># unpack a spkg and remove the spkg. >####################################################### >spkg_unpack() { > tar xjf $1.spkg > rm $1.spkg >} > >####################################################### ># pack a spkg and remove the original folder. >####################################################### >spkg_pack() { > tar cjf $1.spkg $1 > rm -rf $1 >} > >####################################################### ># The two previous function may seem like a lot of work ># but they will help if we have to deal with nested ># spkg (rpy inside R for example) >####################################################### > >####################################################### ># command to patch spkg - argument is package name ># with version number pkg-#p#. The corresponding ># patch is called pkg-#p#.patch. >####################################################### >spkg_patch() { > spkg_unpack $1 > epatch $FILESDIR/$1.patch > spkg_pack $1 >} > >pkg_setup() { > FORTRAN="gfortran" > fortran_pkg_setup > ewarn "maxima cannot be called from sage if built with sbcl" > ewarn "it works with clisp, cmucl and possibly gcl" > ewarn "if you have trouble building clisp look at bug #54738" > > einfo "Sage itself is released under the GPL-2 _or later_ license" > einfo "However sage is distributed with packages having different licenses." > einfo "This ebuild unfortunately does too, here is a list of licenses used:" > einfo "BSD, LGPL, apache 2.0, PYTHON, MIT, public-domain, ZPL and as-is" >} > >src_unpack() { > unpack ${A} > cd ${S} > echo 'patching in progress' ># bypass the sage fortran package alltogether and set sage_fortran ># to be gfortran. > epatch $FILESDIR/sage-2.10.1-simple.patch > cp $FILESDIR/which_fortran ${S}/spkg/base/ > cp $FILESDIR/sage_fortran ${S}/spkg/base/ ># change the deps file to only build what we want to be internal. > cd ${S}/spkg/standard ># fix gmp ABI for 64 bit users patch adapted the gmp-4.2.1-r1 ebuild ># and the coresponding ABI patch. > spkg_unpack gmp-4.2.1.p12 > epatch $FILESDIR/gmp-4.2.1.p12.patch > cd gmp-4.2.1.p12 > sed -i -e 's:ABI = @ABI@:GMPABI = @GMPABI@:' \ > */Makefile.in */*/Makefile.in */*/*/Makefile.in > cd .. > spkg_pack gmp-4.2.1.p12 ># fix to find external blas atlas. > spkg_patch scipy-20071020-0.6.p3 ># patching scipy_sandbox ># fix to find external blas atlas > spkg_patch scipy_sandbox-20071020.p2 ># patching cvxopt ># forget about f77blas which should be provided by blas > spkg_patch cvxopt-0.9.p5 > echo 'patching done' >} > >src_compile() { > emake || die "make failed" > if ( grep "sage: An error occurred" ${S}/install.log ); then > die "make failed" > fi >} > >src_install() { > make DESTDIR="${D}/opt" install > sed -i "s/SAGE_ROOT=.*\/opt/SAGE_ROOT=\"\/opt/" "${D}/opt/bin/sage" "${D}/opt/sage/sage" >} > >src_postinstall(){ ># make sure file are correctly setup in the new location by running ># sage as root. This prevent nasty message to be presented to the user. > sage -v >}
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