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Gentoo's Bugzilla – Attachment 141407 Details for
Bug 201321
sci-mathematics/sage (new ebuild)
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ebuild for sage-2.10
sage-2.10.ebuild (text/plain), 4.59 KB, created by
François Bissey
on 2008-01-20 22:54:46 UTC
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Description:
ebuild for sage-2.10
Filename:
MIME Type:
Creator:
François Bissey
Created:
2008-01-20 22:54:46 UTC
Size:
4.59 KB
patch
obsolete
># Copyright 1999-2006 Gentoo Foundation ># Distributed under the terms of the GNU General Public License v2 ># $Header: $ > >DESCRIPTION="number theory and algebraic geometry software" >HOMEPAGE="http://modular.math.washington.edu/sage/" >SRC_URI="http://modular.math.washington.edu/sage/dist/src/${P}.tar" > >inherit eutils flag-o-matic fortran > >LICENSE="GPL-2" >SLOT="0" >KEYWORDS="x86 ppc" >IUSE="" > >DEPEND="sys-devel/flex > dev-lang/perl > || (sys-devel/bison dev-util/yacc) > app-arch/bzip2 > sys-libs/readline > sys-libs/zlib > >=net-libs/gnutls-1.6.3 > >=media-libs/libpng-1.2.22 > >=media-libs/freetype-2.3.5 > >=sci-libs/gsl-1.9 > >=sci-libs/blas-atlas-3.8.0 > >=sci-libs/lapack-atlas-3.8.0 > >=dev-db/sqlite-3 > media-libs/gd > sci-mathematics/maxima" > ># linbox doesn't configure properly with -Wl,--as-needed so I zap it. >filter-ldflags -Wl,--as-needed ># lcalc has problem with some optimizations enabled by -march=native on an athlon-4. ># Until we can find what exactly is wrong, I filter all -march= setting. ># I'll be glad if someone can point to a better way to do it or which which flag to suppress. ># The error is : ># /scratch/portage/sci-mathematics/sage-2.9.1.1/temp/ccHexhRT.o: In function `__exchange_and_add': ># /usr/lib/gcc/i686-pc-linux-gnu/4.2.2/include/g++-v4/ext/atomicity.h:51: undefined reference to `__sync_fetch_and_add_4' ># >ARCHFLAG=$(get-flag -march) >filter-flags ${ARCHFLAG} > >pkg_setup() { > FORTRAN="gfortran" > fortran_pkg_setup >} > >src_unpack() { > ewarn "maxima cannot be called from sage if built with sbcl" > ewarn "it works with clisp, cmucl and possibly gcl" > unpack ${A} > cd ${S} > echo 'patching in progress' ># bypass the sage fortran package alltogether and set sage_fortran ># to be gfortran. > epatch $FILESDIR/prereq.patch > cp $FILESDIR/which_fortran ${S}/spkg/base/ > cp $FILESDIR/sage_fortran ${S}/spkg/base/ ># change the deps file to only build what we want to be internal. > epatch $FILESDIR/deps.patch > cd ${S}/spkg/standard >################################################################### ># comment as I reverted to using internal gmp/mpfr because ># problems from a sage-gmp patch. >################################################################### ># patching mpfi spkg ># fix spkg-install so mpfi can be find external gmp and mpfr ># tar xfj mpfi-1.3.4-cvs20071125.p2.spkg ># rm mpfi-1.3.4-cvs20071125.p2.spkg ># epatch $FILESDIR/mpfi-build.patch ># tar cjf mpfi-1.3.4-cvs20071125.p2.spkg mpfi-1.3.4-cvs20071125.p2 ># rm -rf mpfi-1.3.4-cvs20071125.p2 ># patching genus2reduction spkg ># fix the header from pari.h to pari/pari.h and the compiler options ># accordingly >#################################################################### ># Switch back to internal pari until gentoo provides the ># newest version and includes gallois data. >#################################################################### ># tar xfj genus2reduction-0.3.spkg ># rm genus2reduction-0.3.spkg ># epatch $FILESDIR/genus2reduction-spkg.patch ># epatch $FILESDIR/genus2reduction.patch ># tar cjf genus2reduction-0.3.spkg genus2reduction-0.3 ># rm -rf genus2reduction-0.3 ># patching lcalc ># Another pari header fix (2 files) and adjust the makefile ># tar xjf lcalc-20070107.p0.spkg ># rm lcalc-20070107.p0.spkg ># epatch $FILESDIR/lcalc.patch ># tar cjf lcalc-20070107.p0.spkg lcalc-20070107.p0 ># rm -rf lcalc-20070107.p0 ># patching scipy ># fix to find external blas atlas. > tar xjf scipy-20071020-0.6.p2.spkg > rm scipy-20071020-0.6.p2.spkg > epatch $FILESDIR/scipy.patch > tar cjf scipy-20071020-0.6.p2.spkg scipy-20071020-0.6.p2 > rm -rf scipy-20071020-0.6.p2 ># patching scipy_sandbox ># fix to find external blas atlas. > tar xjf scipy_sandbox-20071020.spkg > rm scipy_sandbox-20071020.spkg > epatch $FILESDIR/scipy_sandbox.patch > tar cjf scipy_sandbox-20071020.spkg scipy_sandbox-20071020 > rm -rf scipy_sandbox-20071020 ># patching cvxopt ># forget about f77blas which should be provided by blas ># [equivalent of Gentoo blas-reference but providing f77blas] > tar xjf cvxopt-0.9.p5.spkg > rm cvxopt-0.9.p5.spkg > epatch $FILESDIR/cvxopt.patch > tar cjf cvxopt-0.9.p5.spkg cvxopt-0.9.p5 > rm -rf cvxopt-0.9.p5 > echo 'patching done' >} > >src_compile() { > emake || die "make failed" > if ( grep "sage: An error occurred" ${S}/install.log ); then > die "make failed" > fi >} > >src_install() { > make DESTDIR="${D}/opt" install > sed -i "s/SAGE_ROOT=.*\/opt/SAGE_ROOT=\"\/opt/" "${D}/opt/bin/sage" "${D}/opt/sage/sage" >} > >src_postinstall(){ ># make sure file are correctly setup in the new location by running ># sage as root. This prevent nasty message to be presented to the user. > sage -v >}
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bug 201321
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