AMD64 build log

build.log (text/plain), 13.57 KB, created by Simon Cooper on 2007-10-22 21:14:12 UTC

>>> Unpacking source...
>>> Unpacking Numeric-24.2.tar.gz to /var/tmp/portage/dev-python/numeric-24.2-r6/work
 [32;01m*[0m Applying numeric-24.2-arrayobject.patch ...
[A[72C  [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Applying numeric-24.2-umath.patch ...
[A[72C  [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Applying numeric-24.2-eigen.patch ...
[A[72C  [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Applying numeric-24.2-test.patch ...
[A[72C  [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Applying numeric-24.2-dotblas.patch ...
[A[72C  [34;01m[ [32;01mok[34;01m ][0m
Package lapack was not found in the pkg-config search path.
Perhaps you should add the directory containing `lapack.pc'
to the PKG_CONFIG_PATH environment variable
No package 'lapack' found
Package lapack was not found in the pkg-config search path.
Perhaps you should add the directory containing `lapack.pc'
to the PKG_CONFIG_PATH environment variable
No package 'lapack' found
>>> Source unpacked.
>>> Compiling source in /var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2 ...
running build
running build_py
creating build
creating build/lib.linux-x86_64-2.4
copying Lib/Precision.py -> build/lib.linux-x86_64-2.4
copying Lib/UserArray.py -> build/lib.linux-x86_64-2.4
copying Lib/MLab.py -> build/lib.linux-x86_64-2.4
copying Lib/RandomArray.py -> build/lib.linux-x86_64-2.4
copying Lib/ArrayPrinter.py -> build/lib.linux-x86_64-2.4
copying Lib/LinearAlgebra.py -> build/lib.linux-x86_64-2.4
copying Lib/Numeric.py -> build/lib.linux-x86_64-2.4
copying Lib/numeric_version.py -> build/lib.linux-x86_64-2.4
copying Lib/Matrix.py -> build/lib.linux-x86_64-2.4
creating build/lib.linux-x86_64-2.4/FFT
copying Packages/FFT/Lib/FFT.py -> build/lib.linux-x86_64-2.4/FFT
copying Packages/FFT/Lib/__init__.py -> build/lib.linux-x86_64-2.4/FFT
creating build/lib.linux-x86_64-2.4/MA
copying Packages/MA/Lib/__init__.py -> build/lib.linux-x86_64-2.4/MA
copying Packages/MA/Lib/MA_version.py -> build/lib.linux-x86_64-2.4/MA
copying Packages/MA/Lib/MA.py -> build/lib.linux-x86_64-2.4/MA
creating build/lib.linux-x86_64-2.4/RNG
copying Packages/RNG/Lib/Statistics.py -> build/lib.linux-x86_64-2.4/RNG
copying Packages/RNG/Lib/__init__.py -> build/lib.linux-x86_64-2.4/RNG
creating build/lib.linux-x86_64-2.4/Numeric_headers
copying Include/__init__.py -> build/lib.linux-x86_64-2.4/Numeric_headers
running build_ext
building '_numpy' extension
creating build/temp.linux-x86_64-2.4
creating build/temp.linux-x86_64-2.4/Src
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Src/_numpymodule.c -o build/temp.linux-x86_64-2.4/Src/_numpymodule.o
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Src/arrayobject.c -o build/temp.linux-x86_64-2.4/Src/arrayobject.o
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Src/ufuncobject.c -o build/temp.linux-x86_64-2.4/Src/ufuncobject.o
x86_64-pc-linux-gnu-gcc -pthread -shared -march=athlon64 -O2 -msse3 -pipe build/temp.linux-x86_64-2.4/Src/_numpymodule.o build/temp.linux-x86_64-2.4/Src/arrayobject.o build/temp.linux-x86_64-2.4/Src/ufuncobject.o -o build/lib.linux-x86_64-2.4/_numpy.so
building 'multiarray' extension
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Src/multiarraymodule.c -o build/temp.linux-x86_64-2.4/Src/multiarraymodule.o
x86_64-pc-linux-gnu-gcc -pthread -shared -march=athlon64 -O2 -msse3 -pipe build/temp.linux-x86_64-2.4/Src/multiarraymodule.o -o build/lib.linux-x86_64-2.4/multiarray.so
building 'umath' extension
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -DHAVE_INVERSE_HYPERBOLIC=1 -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Src/umathmodule.c -o build/temp.linux-x86_64-2.4/Src/umathmodule.o
x86_64-pc-linux-gnu-gcc -pthread -shared -march=athlon64 -O2 -msse3 -pipe build/temp.linux-x86_64-2.4/Src/umathmodule.o -lm -o build/lib.linux-x86_64-2.4/umath.so
building 'arrayfns' extension
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Src/arrayfnsmodule.c -o build/temp.linux-x86_64-2.4/Src/arrayfnsmodule.o
x86_64-pc-linux-gnu-gcc -pthread -shared -march=athlon64 -O2 -msse3 -pipe build/temp.linux-x86_64-2.4/Src/arrayfnsmodule.o -o build/lib.linux-x86_64-2.4/arrayfns.so
building 'ranlib' extension
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Src/ranlibmodule.c -o build/temp.linux-x86_64-2.4/Src/ranlibmodule.o
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Src/ranlib.c -o build/temp.linux-x86_64-2.4/Src/ranlib.o
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Src/com.c -o build/temp.linux-x86_64-2.4/Src/com.o
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Src/linpack.c -o build/temp.linux-x86_64-2.4/Src/linpack.o
x86_64-pc-linux-gnu-gcc -pthread -shared -march=athlon64 -O2 -msse3 -pipe build/temp.linux-x86_64-2.4/Src/ranlibmodule.o build/temp.linux-x86_64-2.4/Src/ranlib.o build/temp.linux-x86_64-2.4/Src/com.o build/temp.linux-x86_64-2.4/Src/linpack.o -o build/lib.linux-x86_64-2.4/ranlib.so
building 'lapack_lite' extension
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Src/lapack_litemodule.c -o build/temp.linux-x86_64-2.4/Src/lapack_litemodule.o
x86_64-pc-linux-gnu-gcc -pthread -shared -march=athlon64 -O2 -msse3 -pipe build/temp.linux-x86_64-2.4/Src/lapack_litemodule.o -o build/lib.linux-x86_64-2.4/lapack_lite.so
building 'FFT.fftpack' extension
creating build/temp.linux-x86_64-2.4/Packages
creating build/temp.linux-x86_64-2.4/Packages/FFT
creating build/temp.linux-x86_64-2.4/Packages/FFT/Src
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Packages/FFT/Src/fftpackmodule.c -o build/temp.linux-x86_64-2.4/Packages/FFT/Src/fftpackmodule.o
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Packages/FFT/Src/fftpack.c -o build/temp.linux-x86_64-2.4/Packages/FFT/Src/fftpack.o
x86_64-pc-linux-gnu-gcc -pthread -shared -march=athlon64 -O2 -msse3 -pipe build/temp.linux-x86_64-2.4/Packages/FFT/Src/fftpackmodule.o build/temp.linux-x86_64-2.4/Packages/FFT/Src/fftpack.o -o build/lib.linux-x86_64-2.4/FFT/fftpack.so
building 'RNG.RNG' extension
creating build/temp.linux-x86_64-2.4/Packages/RNG
creating build/temp.linux-x86_64-2.4/Packages/RNG/Src
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Packages/RNG/Src/RNGmodule.c -o build/temp.linux-x86_64-2.4/Packages/RNG/Src/RNGmodule.o
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Packages/RNG/Src/ranf.c -o build/temp.linux-x86_64-2.4/Packages/RNG/Src/ranf.o
x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -O2 -msse3 -pipe -fPIC -IInclude -IPackages/FFT/Include -IPackages/RNG/Include -I/usr/include/python2.4 -c Packages/RNG/Src/pmath_rng.c -o build/temp.linux-x86_64-2.4/Packages/RNG/Src/pmath_rng.o
x86_64-pc-linux-gnu-gcc -pthread -shared -march=athlon64 -O2 -msse3 -pipe build/temp.linux-x86_64-2.4/Packages/RNG/Src/RNGmodule.o build/temp.linux-x86_64-2.4/Packages/RNG/Src/ranf.o build/temp.linux-x86_64-2.4/Packages/RNG/Src/pmath_rng.o -o build/lib.linux-x86_64-2.4/RNG/RNG.so
MA Version 12.2.0
Numeric Version 24.2
>>> Source compiled.
...................................EEEE.EE...
======================================================================
ERROR: testEigenvalues (__main__.LinearAlgebraTest)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/Test/test.py", line 798, in testEigenvalues
    import LinearAlgebra
  File "/var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/build/lib.linux-x86_64-2.4/LinearAlgebra.py", line 8, in ?
    import lapack_lite
ImportError: /var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/build/lib.linux-x86_64-2.4/lapack_lite.so: undefined symbol: zgesdd_

======================================================================
ERROR: testHeigenvalues (__main__.LinearAlgebraTest)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/Test/test.py", line 808, in testHeigenvalues
    import LinearAlgebra
  File "/var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/build/lib.linux-x86_64-2.4/LinearAlgebra.py", line 8, in ?
    import lapack_lite
ImportError: /var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/build/lib.linux-x86_64-2.4/lapack_lite.so: undefined symbol: zgesdd_

======================================================================
ERROR: testLinearLeastSquares (__main__.LinearAlgebraTest)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/Test/test.py", line 748, in testLinearLeastSquares
    import LinearAlgebra
  File "/var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/build/lib.linux-x86_64-2.4/LinearAlgebra.py", line 8, in ?
    import lapack_lite
ImportError: /var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/build/lib.linux-x86_64-2.4/lapack_lite.so: undefined symbol: zgesdd_

======================================================================
ERROR: testLinearLeastSquares2 (__main__.LinearAlgebraTest)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/Test/test.py", line 762, in testLinearLeastSquares2
    import LinearAlgebra
  File "/var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/build/lib.linux-x86_64-2.4/LinearAlgebra.py", line 8, in ?
    import lapack_lite
ImportError: /var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/build/lib.linux-x86_64-2.4/lapack_lite.so: undefined symbol: zgesdd_

======================================================================
ERROR: testSVD (__main__.LinearAlgebraTest)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/Test/test.py", line 727, in testSVD
    import LinearAlgebra
  File "/var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/build/lib.linux-x86_64-2.4/LinearAlgebra.py", line 8, in ?
    import lapack_lite
ImportError: /var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/build/lib.linux-x86_64-2.4/lapack_lite.so: undefined symbol: zgesdd_

======================================================================
ERROR: Test LinearAlgebra.generalized_inverse
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/Test/test.py", line 717, in testgeneralizedInverse
    import LinearAlgebra
  File "/var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/build/lib.linux-x86_64-2.4/LinearAlgebra.py", line 8, in ?
    import lapack_lite
ImportError: /var/tmp/portage/dev-python/numeric-24.2-r6/work/Numeric-24.2/build/lib.linux-x86_64-2.4/lapack_lite.so: undefined symbol: zgesdd_

----------------------------------------------------------------------
Ran 45 tests in 0.104s

FAILED (errors=6)
 [31;01m*[0m 
 [31;01m*[0m ERROR: dev-python/numeric-24.2-r6 failed.
 [31;01m*[0m Call stack:
 [31;01m*[0m   ebuild.sh, line 1654:   Called dyn_test
 [31;01m*[0m   ebuild.sh, line 1053:   Called qa_call 'src_test'
 [31;01m*[0m   ebuild.sh, line 44:   Called src_test
 [31;01m*[0m   numeric-24.2-r6.ebuild, line 72:   Called die
 [31;01m*[0m 
 [31;01m*[0m test failed
 [31;01m*[0m If you need support, post the topmost build error, and the call stack if relevant.
 [31;01m*[0m A complete build log is located at '/var/tmp/portage/dev-python/numeric-24.2-r6/temp/build.log'.
 [31;01m*[0m