a build log

build.log (text/plain), 9.06 KB, created by Jukka Ruohonen on 2007-06-06 18:37:31 UTC

 [32;01m*[0m You need one of these Fortran Compilers: gfortran g77
 [32;01m*[0m Installed are:  gfortran
>>> Unpacking source...
>>> Unpacking scipy-0.5.2.tar.gz to /var/tmp/portage/sci-libs/scipy-0.5.2-r1/work
 [32;01m*[0m Applying patches for selected FORTRAN compiler: gfortran
>>> Source unpacked.
>>> Compiling source in /var/tmp/portage/sci-libs/scipy-0.5.2-r1/work/scipy-0.5.2 ...
mkl_info:
  libraries mkl,vml,guide not found in /usr/local/lib
  libraries mkl,vml,guide not found in /usr/lib
  NOT AVAILABLE

fftw3_info:
  libraries fftw3 not found in /usr/local/lib
  FOUND:
    libraries = ['fftw3']
    library_dirs = ['/usr/lib']
    define_macros = [('SCIPY_FFTW3_H', None)]
    include_dirs = ['/usr/include']

djbfft_info:
Disabled djbfft_info: (DJBFFT is None)
Disabled djbfft_info: (DJBFFT is None)
  NOT AVAILABLE

blas_opt_info:
blas_mkl_info:
  libraries mkl,vml,guide not found in /usr/local/lib
  libraries mkl,vml,guide not found in /usr/lib
  NOT AVAILABLE

atlas_blas_threads_info:
Setting PTATLAS=ATLAS
  libraries ptf77blas,cblas,atlas not found in /usr/local/lib
  libraries ptf77blas,cblas,atlas not found in /usr/lib
  NOT AVAILABLE

atlas_blas_info:
  libraries blas,cblas,atlas not found in /usr/local/lib
  FOUND:
    libraries = ['blas', 'cblas', 'atlas']
    library_dirs = ['/usr/lib']
    language = c
    include_dirs = ['/usr/include/atlas']

customize GnuFCompiler
Could not locate executable g77
Could not locate executable f77
Could not locate executable ifort
Could not locate executable ifc
Could not locate executable ifort
Could not locate executable efort
Could not locate executable efc
Could not locate executable ifort
Could not locate executable efort
Could not locate executable efc
customize IntelFCompiler
customize LaheyFCompiler
customize PGroupFCompiler
customize AbsoftFCompiler
customize NAGFCompiler
customize VastFCompiler
customize GnuFCompiler
Could not locate executable g77
Could not locate executable f77
customize CompaqFCompiler
customize IntelItaniumFCompiler
customize IntelEM64TFCompiler
customize Gnu95FCompiler
Could not locate executable f95
customize Gnu95FCompiler
Could not locate executable f95
customize Gnu95FCompiler using config
compiling '_configtest.c':

/* This file is generated from numpy/distutils/system_info.py */
void ATL_buildinfo(void);
int main(void) {
  ATL_buildinfo();
  return 0;
}
C compiler: x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -msse3 -O2 -pipe -fPIC

compile options: '-c'
x86_64-pc-linux-gnu-gcc: _configtest.c
x86_64-pc-linux-gnu-gcc -pthread _configtest.o -L/usr/lib -lblas -lcblas -latlas -o _configtest
ATLAS version 3.7.32 built by root on Wed Jun  6 20:38:12 EEST 2007:
   UNAME    : Linux zealot 2.6.20-hardened-r4 #1 SMP Tue May 29 15:13:36 EEST 2007 x86_64 AMD Athlon(tm) 64 X2 Dual Core Processor 3800+ AuthenticAMD GNU/Linux
   INSTFLG  : -1 0 -a 1
   ARCHDEFS : -DATL_OS_Linux -DATL_ARCH_HAMMER -DATL_CPUMHZ=2000 -DATL_SSE3 -DATL_SSE2 -DATL_SSE1 -DATL_3DNow -DATL_USE64BITS -DATL_GAS_x8664
   F2CDEFS  : -DAdd_ -DF77_INTEGER=int -DStringSunStyle
   CACHEEDGE: 1572864
   F77      : gfortran, version GNU Fortran 95 (GCC) 4.1.1 (Gentoo 4.1.1-r3)
   F77FLAGS : -m64
   SMC      : x86_64-pc-linux-gnu-gcc, version x86_64-pc-linux-gnu-gcc (GCC) 4.1.1 (Gentoo 4.1.1-r3)
   SMCFLAGS : -march=athlon64 -msse3 -O2 -pipe -m64
   SKC      : x86_64-pc-linux-gnu-gcc, version x86_64-pc-linux-gnu-gcc (GCC) 4.1.1 (Gentoo 4.1.1-r3)
   SKCFLAGS : -march=athlon64 -msse3 -O2 -pipe -m64
success!
removing: _configtest.c _configtest.o _configtest
  FOUND:
    libraries = ['blas', 'cblas', 'atlas']
    library_dirs = ['/usr/lib']
    language = c
    define_macros = [('ATLAS_INFO', '"\\"3.7.32\\""')]
    include_dirs = ['/usr/include/atlas']

ATLAS version 3.7.32
lapack_opt_info:
lapack_mkl_info:
  NOT AVAILABLE

atlas_threads_info:
Setting PTATLAS=ATLAS
  libraries ptf77blas,cblas,atlas not found in /usr/local/lib
  libraries lapack not found in /usr/local/lib
  libraries ptf77blas,cblas,atlas not found in /usr/lib
numpy.distutils.system_info.atlas_threads_info
  NOT AVAILABLE

atlas_info:
  libraries blas,cblas,atlas not found in /usr/local/lib
  libraries lapack not found in /usr/local/lib
numpy.distutils.system_info.atlas_info
  FOUND:
    libraries = ['lapack', 'blas', 'cblas', 'atlas']
    library_dirs = ['/usr/lib']
    language = f77
    include_dirs = ['/usr/include/atlas']

customize GnuFCompiler
Could not locate executable g77
Could not locate executable f77
customize IntelFCompiler
customize LaheyFCompiler
customize PGroupFCompiler
customize AbsoftFCompiler
customize NAGFCompiler
customize VastFCompiler
customize GnuFCompiler
Could not locate executable g77
Could not locate executable f77
customize CompaqFCompiler
customize IntelItaniumFCompiler
customize IntelEM64TFCompiler
customize Gnu95FCompiler
Could not locate executable f95
customize Gnu95FCompiler
Could not locate executable f95
customize Gnu95FCompiler using config
compiling '_configtest.c':

/* This file is generated from numpy/distutils/system_info.py */
void ATL_buildinfo(void);
int main(void) {
  ATL_buildinfo();
  return 0;
}
C compiler: x86_64-pc-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -march=athlon64 -msse3 -O2 -pipe -fPIC

compile options: '-c'
x86_64-pc-linux-gnu-gcc: _configtest.c
x86_64-pc-linux-gnu-gcc -pthread _configtest.o -L/usr/lib -llapack -lblas -lcblas -latlas -o _configtest
ATLAS version 3.7.32 built by root on Wed Jun  6 20:38:12 EEST 2007:
   UNAME    : Linux zealot 2.6.20-hardened-r4 #1 SMP Tue May 29 15:13:36 EEST 2007 x86_64 AMD Athlon(tm) 64 X2 Dual Core Processor 3800+ AuthenticAMD GNU/Linux
   INSTFLG  : -1 0 -a 1
   ARCHDEFS : -DATL_OS_Linux -DATL_ARCH_HAMMER -DATL_CPUMHZ=2000 -DATL_SSE3 -DATL_SSE2 -DATL_SSE1 -DATL_3DNow -DATL_USE64BITS -DATL_GAS_x8664
   F2CDEFS  : -DAdd_ -DF77_INTEGER=int -DStringSunStyle
   CACHEEDGE: 1572864
   F77      : gfortran, version GNU Fortran 95 (GCC) 4.1.1 (Gentoo 4.1.1-r3)
   F77FLAGS : -m64
   SMC      : x86_64-pc-linux-gnu-gcc, version x86_64-pc-linux-gnu-gcc (GCC) 4.1.1 (Gentoo 4.1.1-r3)
   SMCFLAGS : -march=athlon64 -msse3 -O2 -pipe -m64
   SKC      : x86_64-pc-linux-gnu-gcc, version x86_64-pc-linux-gnu-gcc (GCC) 4.1.1 (Gentoo 4.1.1-r3)
   SKCFLAGS : -march=athlon64 -msse3 -O2 -pipe -m64
success!
removing: _configtest.c _configtest.o _configtest
  FOUND:
    libraries = ['lapack', 'blas', 'cblas', 'atlas']
    library_dirs = ['/usr/lib']
    language = f77
    define_macros = [('ATLAS_INFO', '"\\"3.7.32\\""')]
    include_dirs = ['/usr/include/atlas']

ATLAS version 3.7.32
ATLAS version 3.7.32
non-existing path in 'Lib/linsolve': 'tests'
umfpack_info:
Disabled umfpack_info: (UMFPACK is None)
/usr/lib64/python2.4/site-packages/numpy/distutils/system_info.py:403: UserWarning: 
    UMFPACK sparse solver (http://www.cise.ufl.edu/research/sparse/umfpack/)
    not found. Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [umfpack]) or by setting
    the UMFPACK environment variable.
  warnings.warn(self.notfounderror.__doc__)
  NOT AVAILABLE

non-existing path in 'Lib/maxentropy': 'doc'
Traceback (most recent call last):
  File "setup.py", line 55, in ?
    setup_package()
  File "setup.py", line 47, in setup_package
    configuration=configuration )
  File "/usr/lib64/python2.4/site-packages/numpy/distutils/core.py", line 142, in setup
    config = configuration()
  File "setup.py", line 19, in configuration
    config.add_subpackage('Lib')
  File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 772, in add_subpackage
    caller_level = 2)
  File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 755, in get_subpackage
    caller_level = caller_level + 1)
  File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 702, in _get_configuration_from_setup_py
    config = setup_module.configuration(*args)
  File "/var/tmp/portage/sci-libs/scipy-0.5.2-r1/work/scipy-0.5.2/Lib/setup.py", line 15, in configuration
    config.add_subpackage('odr')
  File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 772, in add_subpackage
    caller_level = 2)
  File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 755, in get_subpackage
    caller_level = caller_level + 1)
  File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 687, in _get_configuration_from_setup_py
    ('.py', 'U', 1))
  File "Lib/odr/setup.py", line 9, in ?
    from numpy.distutils.misc_util import get_path, Configuration, dot_join
ImportError: cannot import name get_path

!!! ERROR: sci-libs/scipy-0.5.2-r1 failed.
Call stack:
  ebuild.sh, line 1615:   Called dyn_compile
  ebuild.sh, line 972:   Called qa_call 'src_compile'
  ebuild.sh, line 44:   Called src_compile
  scipy-0.5.2-r1.ebuild, line 91:   Called distutils_src_compile 'config_fc' '--fcompiler=gnu95' '--opt=-march=athlon64 -msse3 -O2 -pipe'
  distutils.eclass, line 38:   Called die

!!! compilation failed
!!! If you need support, post the topmost build error, and the call stack if relevant.
!!! A complete build log is located at '/var/tmp/portage/sci-libs/scipy-0.5.2-r1/temp/build.log'.