build log with fortran

build.log (text/plain), 12.49 KB, created by George on 2007-05-21 16:22:11 UTC

 [32;01m*[0m You need one of these Fortran Compilers: gfortran ifc g77 pgf77 pgf90
 [32;01m*[0m Installed are:  gfortran
>>> Unpacking source...
>>> Unpacking netcdf-3.6.2.tar.gz to /var/tmp/portage/sci-libs/netcdf-3.6.2/work
 [32;01m*[0m Applying patches for selected FORTRAN compiler: gfortran
>>> Source unpacked.
>>> Compiling source in /var/tmp/portage/sci-libs/netcdf-3.6.2/work/netcdf-3.6.2 ...
 * econf: updating netcdf-3.6.2/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating netcdf-3.6.2/config.sub with /usr/share/gnuconfig/config.sub
./configure --prefix=/usr --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --enable-shared --docdir=/usr/share/doc/netcdf-3.6.2 --disable-flag-setting --disable-docs-install --enable-f77 --enable-f90 FC=gfortran F90=gfortran F77=gfortran --libdir=/usr/lib64 --build=x86_64-pc-linux-gnu
configure: loading cache /dev/null
/dev/null: line 1: ./configure:: No such file or directory
configure: netCDF 3.6.2
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
configure: checking user options
checking whether CXX is set to ''... no
checking whether FC is set to ''... no
checking whether F90 is set to ''... no
checking whether documentation is to be installed... no
checking whether Fortran compiler(s) should be tested during configure... yes
checking whether configure should try to set compiler flags... no
checking whether FFIO will be used... no
checking whether to skip C++, F77, or F90 APIs if compiler is broken... yes
checking whether only the C library is desired... no
checking whether examples should be built... yes
checking whether F77 API is desired... yes
checking whether F90 API is desired... yes
checking whether fortran type sizes should be checked... yes
checking whether C API is desired... yes
checking where to get netCDF C-only library for separate fortran libraries... 
checking whether CXX API is desired... yes
checking whether v2 netCDF API should be built... yes
checking whether the ncgen/ncdump should be built... yes
checking whether large file (> 2GB) tests should be run... no
checking whether extreme numbers should be used in tests... yes
checking where to put large temp files if large file tests are run... .
checking whether a win32 DLL is desired... no
checking whether separate fortran libs are desired... yes
configure: finding C compiler
checking for x86_64-pc-linux-gnu-xlc... no
checking for x86_64-pc-linux-gnu-cc... no
checking for x86_64-pc-linux-gnu-c89... no
checking for x86_64-pc-linux-gnu-acc... no
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
checking for style of include used by make... GNU
checking dependency style of x86_64-pc-linux-gnu-gcc... gcc3
checking whether x86_64-pc-linux-gnu-gcc and cc understand -c and -o together... yes
checking for an ANSI C-conforming const... yes
configure: finding Fortran compiler (will not be used if Fortran API is not desired)
checking for x86_64-pc-linux-gnu-xlf90... gfortran
checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran accepts -g... yes
checking for x86_64-pc-linux-gnu-xlf... gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran accepts -g... yes
configure: setting up Fortran 90
checking for Fortran flag to compile .f90 files... none
checking fortran 90 modules inclusion flag... -I
checking if Fortran compiler can handle Fortran-90... yes
configure: finding C++ compiler (will not be used if C++ API is not desired)
checking for x86_64-pc-linux-gnu-cl... no
checking for x86_64-pc-linux-gnu-KCC... no
checking for x86_64-pc-linux-gnu-CC... no
checking for x86_64-pc-linux-gnu-cxx... no
checking for x86_64-pc-linux-gnu-cc++... no
checking for x86_64-pc-linux-gnu-xlC... no
checking for x86_64-pc-linux-gnu-aCC... no
checking for x86_64-pc-linux-gnu-c++... x86_64-pc-linux-gnu-c++
checking whether we are using the GNU C++ compiler... yes
checking whether x86_64-pc-linux-gnu-c++ accepts -g... yes
checking dependency style of x86_64-pc-linux-gnu-c++... gcc3
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-pc-linux-gnu-nm
checking the name lister (/usr/bin/x86_64-pc-linux-gnu-nm) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 32768
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r
checking how to recognise dependent libraries... pass_all
checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar
checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip
checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
checking command to parse /usr/bin/x86_64-pc-linux-gnu-nm output from x86_64-pc-linux-gnu-gcc object... failed
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether x86_64-pc-linux-gnu-c++ accepts -g... (cached) yes
checking dependency style of x86_64-pc-linux-gnu-c++... (cached) gcc3
checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-c++ -E
checking for x86_64-pc-linux-gnu-g77... (cached) gfortran
checking whether we are using the GNU Fortran 77 compiler... (cached) yes
checking whether gfortran accepts -g... (cached) yes
checking for x86_64-pc-linux-gnu-gfortran... (cached) gfortran
checking whether we are using the GNU Fortran compiler... (cached) yes
checking whether gfortran accepts -g... (cached) yes
checking for objdir... .libs
checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no
checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for ld used by x86_64-pc-linux-gnu-c++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the x86_64-pc-linux-gnu-c++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for x86_64-pc-linux-gnu-c++ option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-c++ PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-c++ static flag -static works... yes
checking if x86_64-pc-linux-gnu-c++ supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-c++ supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-c++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
configure: finding other utilities
checking for a BSD-compatible install... /usr/bin/install -c
configure: trying to set fortran flags for this platform
checking if we need to set _LARGE_FILES despite results of previous tests... _LARGE_FILES=
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
configure: displaying some results
checking CPPFLAGS...  -DNDEBUG
checking CC CFLAGS... x86_64-pc-linux-gnu-gcc -mtune=athlon64 -fwhole-program -fprefetch-loop-arrays -ftree-loop-linear -floop-optimize2  -O3
checking type x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc is /usr/bin/x86_64-pc-linux-gnu-gcc
checking CXX... x86_64-pc-linux-gnu-c++
checking CXXFLAGS... -mtune=athlon64 -fwhole-program -fprefetch-loop-arrays -ftree-loop-linear -floop-optimize2 -O3
checking type x86_64-pc-linux-gnu-c++... x86_64-pc-linux-gnu-c++ is /usr/bin/x86_64-pc-linux-gnu-c++
checking FC... gfortran
checking FFLAGS... -g -O2
checking type gfortran... gfortran is /usr/bin/gfortran
checking F90... gfortran
checking F90FLAGS... 
checking type gfortran... gfortran is /usr/bin/gfortran
checking AR... x86_64-pc-linux-gnu-ar
checking ARFLAGS... 
checking type x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar is /usr/bin/x86_64-pc-linux-gnu-ar
checking NM... /usr/bin/x86_64-pc-linux-gnu-nm
checking NMFLAGS... 
checking for /usr/bin/x86_64-pc-linux-gnu-nm... /usr/bin/x86_64-pc-linux-gnu-nm
checking nm flags... 
checking for C-equivalent to Fortran routine "SUB"... sub_
checking for Fortran "byte"... yes
checking for Fortran "integer*2"... yes
checking if Fortran "byte" is C "signed char"... configure: error: Could not link conftestf.o and conftest.o

!!! Please attach the following file when filing a report to bugs.gentoo.org:
!!! /var/tmp/portage/sci-libs/netcdf-3.6.2/work/netcdf-3.6.2/config.log

!!! ERROR: sci-libs/netcdf-3.6.2 failed.
Call stack:
  ebuild.sh, line 1615:   Called dyn_compile
  ebuild.sh, line 972:   Called qa_call 'src_compile'
  ebuild.sh, line 44:   Called src_compile
  netcdf-3.6.2.ebuild, line 58:   Called econf '--enable-shared' '--docdir=/usr/share/doc/netcdf-3.6.2' '--disable-flag-setting' '--disable-docs-install' '--enable-f77' '--enable-f90' 'FC=gfortran' 'F90=gfortran' 'F77=gfortran'
  ebuild.sh, line 578:   Called die

!!! econf failed
!!! If you need support, post the topmost build error, and the call stack if relevant.
!!! A complete build log is located at '/var/tmp/portage/sci-libs/netcdf-3.6.2/temp/build.log'.