# Copyright 1999-2006 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $

DESCRIPTION="A gene structure prediction pipeline"
LICENSE="twinscan"
HOMEPAGE="http://mblab.wustl.edu/software/"
SLOT="0"
IUSE=""
KEYWORDS="~x86"
SRC_URI="http://mblab.wustl.edu/software/download/Twinscan_${PV}_src.tar.gz"
S="${WORKDIR}/Twinscan_${PV}_src"

RESTRICT="fetch"

DEPEND="sci-biology/RepeatMasker"
RDEPEND="${DEPEND}"

#inherit toolchain-funcs

src_install() {
	dobin "${S}/bin/iscan"
	dobin "${S}/bin/"*".pl"
	dodir /usr/share/${PN}/profiles
	insinto /usr/share/${PN}/profiles
	doins "${S}/parameters/"*
	dodir /usr/share/${PN}/lib
	insinto /usr/share/${PN}/lib
	doins "${S}/lib/"*".pm"

	echo 'COLON_SEPARATED=PERL5LIB' > ${S}/99${PN}
	echo "PERL5LIB=\"/usr/share/${PN}/lib\"" >> ${S}/99${PN}
	doenvd ${S}/99${PN}

	dodoc README
}