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Gentoo's Bugzilla – Attachment 919781 Details for
Bug 950205
dev-python/scipy-1.15.2 can't crosscompile : fatal error: pybind11/pybind11.h: No such file or directory
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emerge --info
file_950205.txt (text/plain), 15.56 KB, created by
Arniiiii
on 2025-02-23 20:47:37 UTC
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Description:
emerge --info
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Creator:
Arniiiii
Created:
2025-02-23 20:47:37 UTC
Size:
15.56 KB
patch
obsolete
>Portage 3.0.66.1 (python 3.12.8-final-0, default/linux/amd64/23.0/desktop/plasma, gcc-14, glibc-2.40-r8, 6.6.74-gentoo-dist x86_64) >================================================================= >System uname: Linux-6.6.74-gentoo-dist-x86_64-13th_Gen_Intel-R-_Core-TM-_i7-13700HX-with-glibc2.40 >KiB Mem: 65570964 total, 17756468 free >KiB Swap: 271908856 total, 269703672 free >Timestamp of repository gentoo: Sun, 23 Feb 2025 10:48:32 +0000 >Head commit of repository gentoo: 7a7c601e3c82ff41321a738bec412d365bb383b2 > >Timestamp of repository 4nykey: Sat, 22 Feb 2025 22:18:37 +0000 >Head commit of repository 4nykey: f2af9279d02c130fcafe5db15ed91105a0edb961 > >Timestamp of repository booboo: Sat, 22 Feb 2025 22:18:35 +0000 >Head commit of repository booboo: 8e885609a1a25811c21ce50eab90c5af8373d928 > >Head commit of repository ex_repo: e9bddea5f4830af196c8a9bc7f508b1a65f0b421 > >Timestamp of repository gentoo-zh: Sun, 23 Feb 2025 11:18:31 +0000 >Head commit of repository gentoo-zh: d4795cb40bf47010a9ef62e78149b00721bb7d4f > >Timestamp of repository guru: Sat, 22 Feb 2025 22:48:26 +0000 >Head commit of repository guru: 476d0a0e74da11f85c3bfa3274ca7ca9c9fbff82 > >Head commit of repository librewolf: 254d9a6a8cc97448461edd81079162087c6ced53 > >Head commit of repository mrpenguin: 1131e18dcf4481d1437f763f082a2f2256a6cdd2 > >Timestamp of repository mv: Sat, 22 Feb 2025 17:48:39 +0000 >Head commit of repository mv: 8473e52dc7d14f1d2155bcf3e293cc5f1efdf996 > >Timestamp of repository nest: Sat, 22 Feb 2025 22:18:37 +0000 >Head commit of repository nest: 0a2890baa1eb1b3fbe253e00aa6c6031a9f97497 > >Timestamp of repository pf4public: Sun, 23 Feb 2025 00:48:31 +0000 >Head commit of repository pf4public: 69bc1bb6be9f2484db1ac94f26e38dbf031073a8 > >Timestamp of repository steam-overlay: Sat, 22 Feb 2025 22:18:37 +0000 >Head commit of repository steam-overlay: 8e37c209480fdfa381e678eb68bce3f0bd586272 > >Head commit of repository stefantalpalaru: 33c1ac8d8e1b9c7455a25d36b750ce6112f3db4b > >Timestamp of repository supertux88: Sun, 23 Feb 2025 02:18:33 +0000 >Head commit of repository supertux88: a6f4337745c861b105d0345931a805a908413985 > >Timestamp of repository tatsh-overlay: Sat, 22 Feb 2025 22:18:41 +0000 >Head commit of repository tatsh-overlay: afaab51da23dbe03625c783b28f5f30562d36bf2 > >Timestamp of repository torbrowser: Sat, 22 Feb 2025 22:18:37 +0000 >Head commit of repository torbrowser: eda13b2e92e27e036e4b4493b367a6fe249fb652 > >Timestamp of repository vowstar: Sat, 22 Feb 2025 22:18:39 +0000 >Head commit of repository vowstar: 979d76a6c24eed0070eff3f125c43cce6712e643 > >sh bash 5.2_p37 >ld GNU ld (Gentoo 2.43 p3) 2.43.1 >ccache version 4.10.2 [disabled] >app-misc/pax-utils: 1.3.8::gentoo >app-shells/bash: 5.2_p37::gentoo >dev-build/autoconf: 2.13-r8::gentoo, 2.71-r7::gentoo, 2.72-r1::gentoo >dev-build/automake: 1.16.5-r2::gentoo >dev-build/cmake: 3.30.6::gentoo >dev-build/libtool: 2.5.4::gentoo >dev-build/make: 4.4.1-r100::gentoo >dev-build/meson: 1.5.2::gentoo >dev-java/java-config: 2.3.4::gentoo >dev-lang/perl: 5.40.0-r1::gentoo >dev-lang/python: 3.10.16_p1::gentoo, 3.11.11_p1::gentoo, 3.12.8_p1::gentoo, 3.13.1::gentoo >dev-lang/rust-bin: 1.81.0-r101::gentoo, 1.82.0-r101::gentoo >dev-util/ccache: 4.10.2-r1::gentoo >llvm-core/clang: 17.0.6::gentoo, 18.1.8-r6::gentoo, 19.1.7::gentoo, 20.0.0_pre20250111::gentoo, 21.0.0_pre20250215::gentoo >llvm-core/lld: 17.0.6::gentoo, 18.1.8::gentoo, 19.1.4::gentoo, 20.0.0_pre20250111::gentoo, 21.0.0_pre20250215::gentoo >llvm-core/llvm: 17.0.6::gentoo, 18.1.8-r6::gentoo, 19.1.7::gentoo, 20.0.0_pre20250111::gentoo, 21.0.0_pre20250215::gentoo >sys-apps/baselayout: 2.17::gentoo >sys-apps/openrc: 0.55.1::gentoo >sys-apps/sandbox: 2.39::gentoo >sys-devel/binutils: 2.42-r2::gentoo, 2.43-r2::gentoo >sys-devel/binutils-config: 5.5.2::gentoo >sys-devel/gcc: 12.4.0::gentoo, 13.3.1_p20241220::gentoo, 14.2.1_p20241116::gentoo, 15.0.9999::gentoo >sys-devel/gcc-config: 2.12.1::gentoo >sys-kernel/linux-headers: 6.6-r1::gentoo (virtual/os-headers) >sys-libs/glibc: 2.40-r8::gentoo >Repositories: > >gentoo > location: /var/db/repos/gentoo > sync-type: git > sync-uri: https://github.com/gentoo-mirror/gentoo.git > priority: -1000 > volatile: False > >4nykey > location: /var/db/repos/4nykey > sync-type: git > sync-uri: https://github.com/gentoo-mirror/4nykey.git > masters: gentoo > volatile: False > >booboo > location: /var/db/repos/booboo > sync-type: git > sync-uri: https://github.com/gentoo-mirror/booboo.git > masters: gentoo > volatile: False > >crossdev > location: /var/db/repos/crossdev > masters: gentoo vowstar tatsh-overlay stefantalpalaru nest mv librewolf guru booboo 4nykey > volatile: False > >crossdev_experiments > location: /var/db/repos/crossdev_experiments > masters: gentoo > volatile: False > >ex_repo > location: /var/db/repos/ex_repo > sync-type: git > sync-uri: https://github.com/Gerodote/ex_repo.git > masters: gentoo > volatile: False > >gentoo-zh > location: /var/db/repos/gentoo-zh > sync-type: git > sync-uri: https://github.com/gentoo-mirror/gentoo-zh.git > masters: gentoo > volatile: False > >guru > location: /var/db/repos/guru > sync-type: git > sync-uri: https://github.com/gentoo-mirror/guru.git > masters: gentoo > volatile: False > >librewolf > location: /var/db/repos/librewolf > sync-type: git > sync-uri: https://codeberg.org/librewolf/gentoo.git > masters: gentoo > volatile: False > >mrpenguin > location: /var/db/repos/mrpenguin > sync-type: git > sync-uri: https://github.com/Gerodote/MrPenguin-s_ebuilds > masters: gentoo > volatile: False > >mv > location: /var/db/repos/mv > sync-type: git > sync-uri: https://github.com/gentoo-mirror/mv.git > masters: gentoo > volatile: False > >nest > location: /var/db/repos/nest > sync-type: git > sync-uri: https://github.com/gentoo-mirror/nest.git > masters: gentoo > volatile: False > >pf4public > location: /var/db/repos/pf4public > sync-type: git > sync-uri: https://github.com/gentoo-mirror/pf4public.git > masters: gentoo > volatile: False > >steam-overlay > location: /var/db/repos/steam-overlay > sync-type: git > sync-uri: https://github.com/gentoo-mirror/steam-overlay.git > masters: gentoo > volatile: False > >stefantalpalaru > location: /var/db/repos/stefantalpalaru > sync-type: git > sync-uri: https://github.com/stefantalpalaru/gentoo-overlay > masters: gentoo guru > volatile: False > >supertux88 > location: /var/db/repos/supertux88 > sync-type: git > sync-uri: https://github.com/gentoo-mirror/supertux88.git > masters: gentoo > volatile: False > >tatsh-overlay > location: /var/db/repos/tatsh-overlay > sync-type: git > sync-uri: https://github.com/gentoo-mirror/tatsh-overlay.git > masters: gentoo > volatile: False > >torbrowser > location: /var/db/repos/torbrowser > sync-type: git > sync-uri: https://github.com/gentoo-mirror/torbrowser.git > masters: gentoo > volatile: False > >vowstar > location: /var/db/repos/vowstar > sync-type: git > sync-uri: https://github.com/gentoo-mirror/vowstar.git > masters: gentoo > volatile: False > >Binary Repositories: > >myjailchroot > priority: 0 > sync-uri: http://127.0.0.1:56313/packages > >ACCEPT_KEYWORDS="amd64" >ACCEPT_LICENSE="@FREE @BINARY-REDISTRIBUTABLE" >CBUILD="x86_64-pc-linux-gnu" >CFLAGS="-O3 -pipe -march=alderlake -mabm -mno-cldemote -mno-kl -mno-pconfig -mno-sgx -mno-widekl -mshstk --param=l1-cache-line-size=64 --param=l1-cache-size=32 --param=l2-cache-size=30720 -fuse-linker-plugin -flto -Werror=odr -Werror=lto-type-mismatch -Werror=strict-aliasing -fgraphite-identity -floop-interchange -floop-strip-mine -floop-nest-optimize -ftree-loop-linear -ggdb3 -frecord-gcc-switches" >CHOST="x86_64-pc-linux-gnu" >CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/easy-rsa /usr/share/gnupg/qualified.txt /usr/share/maven-bin-3.9/conf /var/bind" >CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php8.2/ext-active/ /etc/php/cgi-php8.2/ext-active/ /etc/php/cli-php8.2/ext-active/ /etc/php/fpm-php8.2/ext-active/ /etc/php/phpdbg-php8.2/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" >CXXFLAGS="-O3 -pipe -march=alderlake -mabm -mno-cldemote -mno-kl -mno-pconfig -mno-sgx -mno-widekl -mshstk --param=l1-cache-line-size=64 --param=l1-cache-size=32 --param=l2-cache-size=30720 -fuse-linker-plugin -flto -Werror=odr -Werror=lto-type-mismatch -Werror=strict-aliasing -fgraphite-identity -floop-interchange -floop-strip-mine -floop-nest-optimize -ftree-loop-linear -ggdb3 -frecord-gcc-switches" >DISTDIR="/var/cache/distfiles" >EMERGE_DEFAULT_OPTS="--jobs=4 --load-average=24 -b" >ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GDK_PIXBUF_MODULE_FILE GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME" >FCFLAGS="-O3 -pipe -march=alderlake -mabm -mno-cldemote -mno-kl -mno-pconfig -mno-sgx -mno-widekl -mshstk --param=l1-cache-line-size=64 --param=l1-cache-size=32 --param=l2-cache-size=30720 -fuse-linker-plugin -flto -Werror=odr -Werror=lto-type-mismatch -Werror=strict-aliasing -fgraphite-identity -floop-interchange -floop-strip-mine -floop-nest-optimize -ftree-loop-linear -ggdb3 -frecord-gcc-switches" >FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg buildpkg-live collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles installsources ipc-sandbox merge-sync merge-wait multilib-strict network-sandbox news noclean nostrip parallel-fetch pid-sandbox pkgdir-index-trusted preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms split-elog split-log strict test unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" >FFLAGS="-O3 -pipe -march=alderlake -mabm -mno-cldemote -mno-kl -mno-pconfig -mno-sgx -mno-widekl -mshstk --param=l1-cache-line-size=64 --param=l1-cache-size=32 --param=l2-cache-size=30720 -fuse-linker-plugin -flto -Werror=odr -Werror=lto-type-mismatch -Werror=strict-aliasing -fgraphite-identity -floop-interchange -floop-strip-mine -floop-nest-optimize -ftree-loop-linear -ggdb3 -frecord-gcc-switches" >GENTOO_MIRRORS="https://gentoo.jss.hu https://ftp.agdsn.de/gentoo https://ftp.halifax.rwth-aachen.de/gentoo/ https://ftp.fau.de/gentoo https://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/" >LANG="en_US.utf8" >LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,--defsym=__gentoo_check_ldflags__=0" >LEX="flex" >MAKEOPTS="-j24 -l24" >PKGDIR="/var/cache/binpkgs" >PORTAGE_CONFIGROOT="/" >PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" >PORTAGE_TMPDIR="/var/tmp" >RUSTFLAGS="-C target-cpu=native -C opt-level=3 -C link-arg=-Wl,-z,pack-relative-relocs " >SHELL="/bin/fish" >USE="10bit 12bit 7z 7zip 8bit X a52 aac accel acl acpi activities adblock aesara aio alsa amd64 archive asm bluetooth bluetooth-sound bluez bluray branding brightness-control brotli btrfs bzip2 cairo calf cdda cdr cet colord crypt cuda cups dbus debuginfod declarative designer dist-kernel djvu dpms dri dts dvd dvdr elogind encode epub exif ext4 fat ffmpeg firmware fish-completion flac flatpak fontconfig ftp gdbm gif git gmp gnu gnuefi gnumeric gnupg gnuplot gpm graphite gstreamer gtk gui h264 hdri hwaccel hwasan iconv icu imaging initramfs ipv6 ipython jit jpeg jpeg2k jpegxl kde kdesu keyring kf6compat kwallet lapack lapacke latex lcms libarchive libcxx libdrm libmpv libnotify libreoffice libtirpc libv4l lrz lsp lspclient lto lua luajittex luatex lv2 lz4 lzip lzma lzo lzo2 mad man markdown mathml mng mobi mp3 mp4 mpeg mpris mpv mtp multilib mumble nbd ncurses networkmanager nfs nls ntfs numa numpy nvdec nvenc nvidia nvidia-gpu nvimpager nvme ogg ompt onednn opencl opengl openmp openssl openvpn pam pango parted pcre pdf pgo pipewire plasma png policykit postgres ppds pulseaudio pyglet python qmake qml qmldesigner qmlls qsv qt5 qt6 rar raw readline regex sanitizer science screencast sdl seccomp semantic-desktop sftp sixel sound sound-server spell ssl startup-notification svg symengine test test-rust tiff tmux truetype udev udisks unicode upower uri-support usb v4l v4l2 v4lutils vaapi vdpau vim vim-pager vim-syntax vorbis vulkan wav wayland webp websocket websockets widgets wifi wxwidgets x264 x265 xattr xcb xfs xft xinerama xls xlsx xml xterm xv xvid zamaudio zip zlib zsh-completion zstd" ABI_X86="64" ADA_TARGET="gcc_14" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_anon authn_dbm authn_file authz_dbm authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir env expires ext_filter file_cache filter headers include info log_config logio mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2 aes avx avx2 f16c fma3 pclmul popcnt rdrand sha sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax navcom oceanserver oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 tsip tripmate tnt ublox" GUILE_SINGLE_TARGET="3-0" GUILE_TARGETS="3-0" INPUT_DEVICES="libinput synaptics elographics" KERNEL="linux" L10N="ach af an ar ast az be bg bn br bs ca ca-valencia cak cs cy da de dsb el en-AU en-CA en-GB en-US eo es-419 es-AR es-CL es-ES es-MX et eu fa ff fi fil fr fur fy ga gd gl gn gu he hi hr hsb hu hy ia id is it ja ka kab kk km kn ko lij lt lv mk mr ms my nb ne nl nn oc pa pl pt-BR pt-PT rm ro ru sc sco si sk sl son sq sr sv szl ta te th tl tr trs uk ur uz vi xh zh-CN zh-TW am csb de-1901 en es fo grc gv hil hus ku ky la mg mi ml mn mt nds ny or qu rw sw tet tk tn wa yi zu as bn-IN bo brx ckb dgo dz en-ZA gug kmr-Latn kok ks lb lo mai mni nr nso om pt sa sat sd sid sr-Latn ss st sw-TZ tg ts tt ug ve vec zh skr fr-CA zh-HK" LCD_DEVICES="bayrad cfontz glk hd44780 lb216 lcdm001 mtxorb text" LLVM_TARGETS="AArch64 AMDGPU ARC ARM AVR BPF CSKY DirectX Hexagon Lanai LoongArch M68k MSP430 Mips NVPTX PowerPC RISCV SPIRV Sparc SystemZ VE WebAssembly X86 XCore Xtensa" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php8-2" POSTGRES_TARGETS="postgres16" PYTHON_SINGLE_TARGET="python3_12" PYTHON_TARGETS="python3_12 python3_10 python3_11" RUBY_TARGETS="ruby32" VIDEO_CARDS="nvidia intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipp2p iface geoip fuzzy condition tarpit sysrq proto logmark ipmark dhcpmac delude chaos account" >Unset: ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LC_ALL, LD, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PYTHONPATH, RANLIB, READELF, SIZE, STRINGS, STRIP, YACC, YFLAGS
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bug 950205
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