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Gentoo's Bugzilla – Attachment 918887 Details for
Bug 949697
sci-libs/coinor-clp fails to configure on 'error: Cannot find symbol(s) amd_defaults with AMD'
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sci-libs/coinor-clp-1.17.6-r1: build.log
file_949697.txt (text/plain), 10.62 KB, created by
primalucegd
on 2025-02-13 10:18:07 UTC
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Description:
sci-libs/coinor-clp-1.17.6-r1: build.log
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Creator:
primalucegd
Created:
2025-02-13 10:18:07 UTC
Size:
10.62 KB
patch
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> * Package: sci-libs/coinor-clp-1.17.6-r1:0/1 > * Repository: gentoo > * Maintainer: sci@gentoo.org > * USE: abi_x86_64 amd64 elibc_glibc glpk kernel_linux metis sparse > * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox >>>> Unpacking source... >>>> Unpacking coinor-clp-1.17.6.tar.gz to /var/tmp/portage/sci-libs/coinor-clp-1.17.6-r1/work >>>> Source unpacked in /var/tmp/portage/sci-libs/coinor-clp-1.17.6-r1/work >>>> Preparing source in /var/tmp/portage/sci-libs/coinor-clp-1.17.6-r1/work/Clp-releases-1.17.6/Clp ... >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-libs/coinor-clp-1.17.6-r1/work/Clp-releases-1.17.6/Clp ... > * econf: updating Clp-releases-1.17.6/Clp/config.sub with /usr/share/gnuconfig/config.sub > * econf: updating Clp-releases-1.17.6/Clp/config.guess with /usr/share/gnuconfig/config.guess > * econf: updating Clp-releases-1.17.6/config.sub with /usr/share/gnuconfig/config.sub > * econf: updating Clp-releases-1.17.6/config.guess with /usr/share/gnuconfig/config.guess >./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --disable-static --libdir=/usr/lib64 --enable-dependency-linking --with-coin-instdir=/var/tmp/portage/sci-libs/coinor-clp-1.17.6-r1/image/usr --without-dot --with-amd-incdir=/usr/include --with-amd-lib=-lamd --with-glpk-incdir=/usr/include --with-glpk-lib=-lglpk --with-amd-incdir=/usr/include --with-amd-lib=-lamd --with-cholmod-incdir=/usr/include --with-cholmod-lib=-lcholmod --with-metis-incdir= --with-metis-lib=-lmetis -lGKlib --without-mumps >configure: loading site script /usr/share/config.site >configure: loading site script /usr/share/config.site.d/80crossdev.conf >checking build system type... x86_64-pc-linux-gnu >checking for svnversion... no >checking whether we want to compile in debug mode... no >checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc >checking for C compiler default output file name... a.out >checking whether the C compiler works... yes >checking whether we are cross compiling... no >checking for suffix of executables... >checking for suffix of object files... o >checking whether we are using the GNU C compiler... yes >checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes >checking for x86_64-pc-linux-gnu-gcc option to accept ANSI C... none needed >configure: C compiler options are: -O2 -pipe -march=native -mtune=native -DCLP_BUILD >checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++ >checking whether we are using the GNU C++ compiler... yes >checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes >checking whether C++ compiler x86_64-pc-linux-gnu-g++ works... yes >configure: C++ compiler options are: -O2 -pipe -march=native -mtune=native -DCLP_BUILD >checking for egrep... grep -E >checking whether ln -s works... yes >checking for a BSD-compatible install... /usr/lib/portage/python3.12/ebuild-helpers/xattr/install -c >checking whether build environment is sane... yes >checking for gawk... gawk >checking whether make sets $(MAKE)... yes >checking for style of include used by make... GNU >checking dependency style of x86_64-pc-linux-gnu-gcc... none >checking dependency style of x86_64-pc-linux-gnu-g++... none >checking whether to enable maintainer-specific portions of Makefiles... no >checking host system type... x86_64-pc-linux-gnu >checking for a sed that does not truncate output... /bin/sed >checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld >checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes >checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r >checking for BSD-compatible nm... /usr/bin/nm -B >checking how to recognise dependent libraries... pass_all >checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E >checking for ANSI C header files... no >checking for sys/types.h... yes >checking for sys/stat.h... yes >checking for stdlib.h... yes >checking for string.h... yes >checking for memory.h... yes >checking for strings.h... yes >checking for inttypes.h... yes >checking for stdint.h... yes >checking for unistd.h... yes >checking dlfcn.h usability... yes >checking dlfcn.h presence... yes >checking for dlfcn.h... yes >checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E >checking for x86_64-pc-linux-gnu-g77... no >checking for x86_64-pc-linux-gnu-f77... no >checking for x86_64-pc-linux-gnu-xlf... no >checking for x86_64-pc-linux-gnu-frt... no >checking for x86_64-pc-linux-gnu-pgf77... no >checking for x86_64-pc-linux-gnu-fort77... no >checking for x86_64-pc-linux-gnu-fl32... no >checking for x86_64-pc-linux-gnu-af77... no >checking for x86_64-pc-linux-gnu-f90... no >checking for x86_64-pc-linux-gnu-xlf90... no >checking for x86_64-pc-linux-gnu-pgf90... no >checking for x86_64-pc-linux-gnu-epcf90... no >checking for x86_64-pc-linux-gnu-f95... no >checking for x86_64-pc-linux-gnu-fort... no >checking for x86_64-pc-linux-gnu-xlf95... no >checking for x86_64-pc-linux-gnu-ifc... no >checking for x86_64-pc-linux-gnu-efc... no >checking for x86_64-pc-linux-gnu-pgf95... no >checking for x86_64-pc-linux-gnu-lf95... no >checking for x86_64-pc-linux-gnu-gfortran... x86_64-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran 77 compiler... yes >checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes >checking the maximum length of command line arguments... 32768 >checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok >checking for objdir... .libs >checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar >checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib >checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip >checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no >checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC >checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC works... yes >checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes >checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes >checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking whether -lc should be explicitly linked in... no >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking whether stripping libraries is possible... yes >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >configure: creating libtool >appending configuration tag "CXX" to libtool >checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 >checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes >checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC >checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC works... yes >checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes >checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes >checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >appending configuration tag "F77" to libtool >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC >checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes >checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes >checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes >checking whether the x86_64-pc-linux-gnu-gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >configure: Build is "x86_64-pc-linux-gnu". >checking for dos2unix... no >checking if library version is set... 15:6:14 >checking for x86_64-pc-linux-gnu-pkg-config... x86_64-pc-linux-gnu-pkg-config >checking pkg-config is at least version 0.16.0... yes >checking for COIN-OR package CoinUtils... yes: 2.11.9 >checking for COIN-OR package Osi... yes: 0.108.6 >checking for COIN-OR package OsiTests... yes: 0.108.6 >checking for COIN-OR package Sample... not given: Package 'coindatasample' not found >checking for COIN-OR package Netlib... not given: Package 'coindatanetlib' not found >checking if user provides library for AMD... yes >checking whether symbol amd_defaults is available with AMD... no >configure: error: Cannot find symbol(s) amd_defaults with AMD > >!!! Please attach the following file when seeking support: >!!! /var/tmp/portage/sci-libs/coinor-clp-1.17.6-r1/work/Clp-releases-1.17.6/Clp/config.log > * ERROR: sci-libs/coinor-clp-1.17.6-r1::gentoo failed (configure phase): > * econf failed > * > * Call stack: > * ebuild.sh, line 136: Called src_configure > * environment, line 1357: Called econf '--enable-dependency-linking' '--with-coin-instdir=/var/tmp/portage/sci-libs/coinor-clp-1.17.6-r1/image/usr' '--without-dot' '--with-amd-incdir=/usr/include' '--with-amd-lib=-lamd' '--with-glpk-incdir=/usr/include' '--with-glpk-lib=-lglpk' '--with-amd-incdir=/usr/include' '--with-amd-lib=-lamd' '--with-cholmod-incdir=/usr/include' '--with-cholmod-lib=-lcholmod' '--with-metis-incdir=' '--with-metis-lib=-lmetis -lGKlib' '--without-mumps' > * phase-helpers.sh, line 647: Called __helpers_die 'econf failed' > * isolated-functions.sh, line 112: Called die > * The specific snippet of code: > * die "$@" > * > * If you need support, post the output of `emerge --info '=sci-libs/coinor-clp-1.17.6-r1::gentoo'`, > * the complete build log and the output of `emerge -pqv '=sci-libs/coinor-clp-1.17.6-r1::gentoo'`. > * The complete build log is located at '/var/tmp/portage/sci-libs/coinor-clp-1.17.6-r1/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/sci-libs/coinor-clp-1.17.6-r1/temp/environment'. > * Working directory: '/var/tmp/portage/sci-libs/coinor-clp-1.17.6-r1/work/Clp-releases-1.17.6/Clp' > * S: '/var/tmp/portage/sci-libs/coinor-clp-1.17.6-r1/work/Clp-releases-1.17.6/Clp'
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bug 949697
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