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Gentoo's Bugzilla – Attachment 893975 Details for
Bug 932532
sci-physics/qmeq-1.1 - Error compiling Cython file:
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sci-physics:qmeq-1.1:20240523-002025.log
sci-physics:qmeq-1.1:20240523-002025.log (text/plain), 6.64 KB, created by
Toralf Förster
on 2024-05-23 08:27:41 UTC
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sci-physics:qmeq-1.1:20240523-002025.log
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Creator:
Toralf Förster
Created:
2024-05-23 08:27:41 UTC
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6.64 KB
patch
obsolete
> * Package: sci-physics/qmeq-1.1:0 > * Repository: gentoo > * Maintainer: dilfridge@gentoo.org > * USE: abi_x86_64 amd64 elibc_glibc kernel_linux python_targets_python3_11 > * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox > >>>> Unpacking source... >>>> Unpacking qmeq-1.1.tgz to /var/tmp/portage/sci-physics/qmeq-1.1/work >>>> Source unpacked in /var/tmp/portage/sci-physics/qmeq-1.1/work >>>> Preparing source in /var/tmp/portage/sci-physics/qmeq-1.1/work/qmeq-1.1 ... > * Build system packages: > * dev-python/gpep517 : 16 > * dev-python/installer : 0.7.0 > * dev-python/setuptools : 70.0.0 > * dev-python/setuptools-rust : 1.9.0 > * dev-python/setuptools-scm : 8.1.0 > * dev-python/wheel : 0.43.0 >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-physics/qmeq-1.1/work/qmeq-1.1 ... >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-physics/qmeq-1.1/work/qmeq-1.1 ... > * python3_11: running distutils-r1_run_phase distutils-r1_python_compile > * Building the wheel for qmeq-1.1 via setuptools.build_meta >python3.11 -m gpep517 build-wheel --prefix=/usr --backend setuptools.build_meta --output-fd 3 --wheel-dir /var/tmp/portage/sci-physics/qmeq-1.1/work/qmeq-1.1-python3_11/wheel >2024-05-23 00:20:39,761 gpep517 INFO Building wheel via backend setuptools.build_meta >INFO: Disabling color, you really want to install colorlog. >2024-05-23 00:20:39,821 pythran INFO Disabling color, you really want to install colorlog. >/usr/lib/python3.11/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /var/tmp/portage/sci-physics/qmeq-1.1/work/qmeq-1.1/qmeq/approach/base/c_RTD.pxd > tree = Parsing.p_module(s, pxd, full_module_name) > >Error compiling Cython file: >------------------------------------------------------------ >... >import numpy as np >cimport numpy as np > > >ctypedef np.uint8_t bool_t >ctypedef np.int_t int_t > ^ >------------------------------------------------------------ > >qmeq/wrappers/c_mytypes.pxd:6:9: 'int_t' is not a type identifier >Traceback (most recent call last): > File "<frozen runpy>", line 198, in _run_module_as_main > File "<frozen runpy>", line 88, in _run_code > File "/usr/lib/python3.11/site-packages/gpep517/__main__.py", line 443, in <module> > sys.exit(main()) > ^^^^^^ > File "/usr/lib/python3.11/site-packages/gpep517/__main__.py", line 439, in main > return func(args) > ^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/gpep517/__main__.py", line 229, in build_wheel > print(build_wheel_impl(args, args.wheel_dir), file=out) > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/gpep517/__main__.py", line 221, in build_wheel_impl > wheel_name = backend.build_wheel(str(wheel_dir), args.config_json) > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 410, in build_wheel > return self._build_with_temp_dir( > ^^^^^^^^^^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 395, in _build_with_temp_dir > self.run_setup() > File "/usr/lib/python3.11/site-packages/setuptools/build_meta.py", line 311, in run_setup > exec(code, locals()) > File "<string>", line 113, in <module> > File "<string>", line 70, in get_ext_modules > File "/usr/lib/python3.11/site-packages/Cython/Build/Dependencies.py", line 1159, in cythonize > cythonize_one(*args) > File "/usr/lib/python3.11/site-packages/Cython/Build/Dependencies.py", line 1326, in cythonize_one > raise CompileError(None, pyx_file) >Cython.Compiler.Errors.CompileError: qmeq/approach/base/c_RTD.pyx >Compiling qmeq/approach/c_aprclass.pyx because it changed. >Compiling qmeq/approach/c_kernel_handler.pyx because it changed. >Compiling qmeq/approach/base/c_pauli.pyx because it changed. >Compiling qmeq/approach/base/c_lindblad.pyx because it changed. >Compiling qmeq/approach/base/c_redfield.pyx because it changed. >Compiling qmeq/approach/base/c_neumann1.pyx because it changed. >Compiling qmeq/approach/base/c_neumann2.pyx because it changed. >Compiling qmeq/approach/base/c_RTD.pyx because it changed. >Compiling qmeq/specfunc/c_specfunc.pyx because it changed. >Compiling qmeq/approach/elph/c_pauli.pyx because it changed. >Compiling qmeq/approach/elph/c_lindblad.pyx because it changed. >Compiling qmeq/approach/elph/c_redfield.pyx because it changed. >Compiling qmeq/approach/elph/c_neumann1.pyx because it changed. >Compiling qmeq/specfunc/c_specfunc_elph.pyx because it changed. >Compiling qmeq/wrappers/c_lapack.pyx because it changed. >Compiling qmeq/wrappers/c_mytypes.pyx because it changed. >[ 1/16] Cythonizing qmeq/approach/base/c_RTD.pyx > * ERROR: sci-physics/qmeq-1.1::gentoo failed (compile phase): > * Wheel build failed > * > * Call stack: > * ebuild.sh, line 136: Called src_compile > * environment, line 4088: Called distutils-r1_src_compile > * environment, line 1972: Called _distutils-r1_run_foreach_impl 'distutils-r1_python_compile' > * environment, line 804: Called python_foreach_impl 'distutils-r1_run_phase' 'distutils-r1_python_compile' > * environment, line 3702: Called multibuild_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'distutils-r1_python_compile' > * environment, line 3229: Called _multibuild_run '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'distutils-r1_python_compile' > * environment, line 3227: Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'distutils-r1_python_compile' > * environment, line 1255: Called distutils-r1_run_phase 'distutils-r1_python_compile' > * environment, line 1954: Called distutils-r1_python_compile > * environment, line 1769: Called distutils_pep517_install '/var/tmp/portage/sci-physics/qmeq-1.1/work/qmeq-1.1-python3_11/install' > * environment, line 2345: Called die > * The specific snippet of code: > * local wheel=$("${cmd[@]}" 3>&1 1>&2 || die "Wheel build failed"); > * > * If you need support, post the output of `emerge --info '=sci-physics/qmeq-1.1::gentoo'`, > * the complete build log and the output of `emerge -pqv '=sci-physics/qmeq-1.1::gentoo'`. > * The complete build log is located at '/var/log/portage/sci-physics:qmeq-1.1:20240523-002025.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-physics/qmeq-1.1/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/sci-physics/qmeq-1.1/temp/environment'. > * Working directory: '/var/tmp/portage/sci-physics/qmeq-1.1/work/qmeq-1.1' > * S: '/var/tmp/portage/sci-physics/qmeq-1.1/work/qmeq-1.1' >
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