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Gentoo's Bugzilla – Attachment 887774 Details for
Bug 927149
sci-physics/espresso-4.2.0 fails to compile: dataspace.hpp:52:5: error: template<long unsigned int N> h5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&) cannot be overloaded with template<long unsigned int N> h5xx::dataspace::dat
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build.log
build.log (text/plain), 325.95 KB, created by
Agostino Sarubbo
on 2024-03-16 21:22:46 UTC
(
hide
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Description:
build.log
Filename:
MIME Type:
Creator:
Agostino Sarubbo
Created:
2024-03-16 21:22:46 UTC
Size:
325.95 KB
patch
obsolete
> * Package: sci-physics/espresso-4.2.0:0 > * Repository: gentoo > * Maintainer: sci-physics@gentoo.org > * USE: abi_x86_64 amd64 elibc_glibc fftw hdf5 kernel_linux python_single_target_python3_11 > * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox > > >@@@@@ PLEASE PAY ATTENTION HERE!!! @@@@@ >This information may help you to understand if this is a duplicate or if this bug exists after you pushed a fix; >This ebuild was merged at the following commit: >https://github.com/gentoo/gentoo/commit/021a252a945d8eccf702d7703c2904a35cdad18f (Sat Mar 16 12:13:28 UTC 2024) >@@@@@ END @@@@@ > > > >@@@@@ PLEASE PAY ATTENTION HERE!!! @@@@@ >This ebuild was merged (directly or as a dependency) because of the following commit: >https://github.com/gentoo/gentoo/commit/dc22f56db1caf6960831a509410e453815767bee >@@@@@ END @@@@@ > > > >################## ># emerge --info: # >################## >Portage 3.0.63 (python 3.12.2-final-0, default/linux/amd64/17.1, gcc-13, glibc-2.39-r2, 6.1.66-gentoo-dist x86_64) >================================================================= >System uname: Linux-6.1.66-gentoo-dist-x86_64-AMD_EPYC_7513_32-Core_Processor-with-glibc2.39 >KiB Mem: 263452516 total, 130708144 free >KiB Swap: 0 total, 0 free >sh bash 5.2_p26 >ld GNU ld (Gentoo 2.42 p3) 2.42.0 >app-misc/pax-utils: 1.3.7::gentoo >app-shells/bash: 5.2_p26::gentoo >dev-build/autoconf: 2.72-r1::gentoo >dev-build/automake: 1.16.5-r2::gentoo >dev-build/cmake: 3.28.3::gentoo >dev-build/libtool: 2.4.7-r2::gentoo >dev-build/make: 4.4.1-r1::gentoo >dev-build/meson: 1.4.0::gentoo >dev-lang/perl: 5.38.2-r2::gentoo >dev-lang/python: 3.10.13_p3::gentoo, 3.11.8_p1::gentoo, 3.12.2_p1::gentoo >sys-apps/baselayout: 2.15::gentoo >sys-apps/openrc: 0.53::gentoo >sys-apps/sandbox: 2.38::gentoo >sys-devel/binutils: 2.42-r1::gentoo >sys-devel/binutils-config: 5.5::gentoo >sys-devel/gcc: 13.2.1_p20240210::gentoo >sys-devel/gcc-config: 2.11::gentoo >sys-kernel/linux-headers: 6.7::gentoo (virtual/os-headers) >sys-libs/glibc: 2.39-r2::gentoo >Repositories: > >gentoo > location: /usr/portage > sync-type: rsync > sync-uri: rsync://rsync.gentoo.org/gentoo-portage > priority: -1000 > volatile: True > sync-rsync-verify-metamanifest: yes > sync-rsync-extra-opts: > sync-rsync-verify-jobs: 1 > sync-rsync-verify-max-age: 3 > >ACCEPT_KEYWORDS="amd64 ~amd64" >ACCEPT_LICENSE="* GPL-3" >CBUILD="x86_64-pc-linux-gnu" >CFLAGS="-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0" >CHOST="x86_64-pc-linux-gnu" >CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" >CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" >CXXFLAGS="-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0" >DISTDIR="/var/tmp/portage/sci-physics/espresso-4.2.0/distdir" >EMERGE_DEFAULT_OPTS="--complete-graph y --with-bdeps=y -1 -k -b --backtrack=100" >ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GDK_PIXBUF_MODULE_FILE GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME" >FCFLAGS="-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0" >FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync merge-wait multilib-strict network-sandbox news parallel-fetch pid-sandbox pkgdir-index-trusted preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-log strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" >FFLAGS="-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0" >GENTOO_MIRRORS="http://mirror.leaseweb.com/gentoo/ http://ftp.snt.utwente.nl/pub/os/linux/gentoo/ http://ftp.belnet.be/pub/rsync.gentoo.org/gentoo/ http://distfiles.gentoo.org" >LANG="en_US.utf8" >LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0" >LEX="flex" >MAKEOPTS="-j25" >PKGDIR="/root/tbci/binpkg" >PORTAGE_CONFIGROOT="/" >PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" >PORTAGE_TMPDIR="/var/tmp" >SHELL="/bin/bash" >USE="acl amd64 bzip2 cli crypt debug dri elogind fftw fortran gdbm hdf5 iconv ipv6 jumbo-build libtirpc multilib native-symlinks ncurses nls openmp pam pcre readline seccomp split-usr ssl test-rust unicode xattr zlib" ABI_X86="64" ELIBC="glibc" KERNEL="linux" PYTHON_SINGLE_TARGET="python3_11" >Unset: ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LC_ALL, LD, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PYTHONPATH, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS > > > > > >############################## ># emerge history (qlop -mv): # >############################## >2024-03-16T13:22:37 >>> sys-apps/hwdata-0.376 >2024-03-16T13:22:42 >>> app-eselect/eselect-blas-0.3 >2024-03-16T13:22:47 >>> app-eselect/eselect-lapack-0.3 >2024-03-16T13:22:52 >>> dev-build/b2-5.0.0 >2024-03-16T13:22:57 >>> dev-libs/libltdl-2.4.7-r1 >2024-03-16T13:23:02 >>> virtual/fortran-0-r1 >2024-03-16T13:23:07 >>> sci-libs/fftw-3.3.10 >2024-03-16T13:23:16 >>> sci-libs/openblas-0.3.26 >2024-03-16T13:23:24 >>> dev-util/patchelf-0.18.0 >2024-03-16T13:23:28 >>> x11-libs/libpciaccess-0.18 >2024-03-16T13:23:31 >>> dev-python/pyproject-metadata-0.7.1 >2024-03-16T13:23:35 >>> dev-python/meson-python-0.15.0 >2024-03-16T13:23:38 >>> sys-apps/pciutils-3.11.1 >2024-03-16T13:23:42 >>> sys-apps/hwloc-2.9.3 >2024-03-16T13:23:48 >>> sci-libs/lapack-3.12.0-r1 >2024-03-16T13:23:45 >>> sys-cluster/openmpi-4.1.6 >2024-03-16T13:29:01 >>> virtual/cblas-3.8 >2024-03-16T13:28:58 >>> virtual/mpi-2.0-r7 >2024-03-16T13:29:04 >>> virtual/lapack-3.10 >2024-03-16T13:29:25 >>> dev-python/numpy-1.26.4 >2024-03-16T13:29:21 >>> sci-libs/hdf5-1.14.3-r1 >2024-03-16T13:29:18 >>> dev-libs/boost-1.84.0-r3 > > > > >####################################### ># installed packages (qlist -ICvUSS): # >####################################### >acct-group/audio-0-r2:0 >acct-group/cdrom-0-r2:0 >acct-group/dialout-0-r2:0 >acct-group/disk-0-r2:0 >acct-group/floppy-0-r1:0 >acct-group/input-0-r2:0 >acct-group/kmem-0-r2:0 >acct-group/kvm-0-r2:0 >acct-group/lp-0-r2:0 >acct-group/man-0-r2:0 >acct-group/messagebus-0-r2:0 >acct-group/polkitd-0-r2:0 >acct-group/portage-0-r1:0 >acct-group/render-0-r2:0 >acct-group/root-0-r1:0 >acct-group/sgx-0-r1:0 >acct-group/sshd-0-r2:0 >acct-group/tape-0-r2:0 >acct-group/tty-0-r2:0 >acct-group/usb-0-r2:0 >acct-group/video-0-r2:0 >acct-user/man-1-r2:0 >acct-user/messagebus-0-r2:0 >acct-user/polkitd-0-r2:0 >acct-user/portage-0-r2:0 >acct-user/sshd-0-r2:0 >app-admin/eselect-1.4.27-r1:0 -doc -emacs -vim-syntax >app-admin/perl-cleaner-2.31:0 -pkgcore >app-alternatives/awk-4:0 -busybox gawk -mawk -nawk split-usr >app-alternatives/bc-0:0 -gh gnu >app-alternatives/bzip2-1:0 -lbzip2 -pbzip2 reference split-usr >app-alternatives/cpio-0:0 gnu -libarchive split-usr >app-alternatives/gzip-1:0 -pigz reference split-usr >app-alternatives/lex-0-r1:0 flex -reflex >app-alternatives/ninja-1:0 reference -samurai >app-alternatives/sh-0:0 bash -busybox -dash -ksh -lksh -mksh >app-alternatives/tar-0:0 gnu -libarchive split-usr >app-alternatives/yacc-1-r2:0 bison -byacc -reference >app-arch/bzip2-1.0.8-r5:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static -static-libs -verify-sig >app-arch/cpio-2.15:0 nls >app-arch/gzip-1.13:0 -pic -static -verify-sig >app-arch/libarchive-3.7.2-r2:0/13 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 acl -blake2 bzip2 e2fsprogs -expat iconv -lz4 lzma -lzo -nettle -static-libs -test -verify-sig xattr -zstd >app-arch/tar-1.35:0 acl -minimal nls -selinux -verify-sig xattr >app-arch/unzip-6.0_p27-r1:0 bzip2 -natspec unicode >app-arch/xz-utils-5.6.1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cpu_flags_arm_crc32 -doc extra-filters nls -pgo -static-libs -verify-sig >app-arch/zstd-1.5.5-r1:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -lz4 lzma -static-libs -test zlib >app-crypt/gnupg-2.4.5:0 bzip2 -doc -ldap nls readline -selinux smartcard ssl -test tofu -tools -tpm -usb -user-socket -verify-sig -wks-server >app-crypt/gpgme-1.23.2:1/11.6.15.2 -common-lisp cxx debug -python python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -qt5 -qt6 -static-libs -test -verify-sig >app-crypt/libb2-0.98.1-r3:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -native-cflags openmp -static-libs >app-crypt/libmd-1.1.0:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 >app-crypt/pinentry-1.2.1-r6:0 -X -caps -efl -emacs -gtk -keyring ncurses -qt5 -verify-sig -wayland >app-crypt/rhash-1.4.4-r1:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug nls ssl -static-libs >app-editors/nano-7.2-r1:0 -debug -justify -magic -minimal ncurses nls spell -static unicode >app-eselect/eselect-blas-0.3:0 >app-eselect/eselect-fontconfig-20220403:0 >app-eselect/eselect-iptables-20220320:0 >app-eselect/eselect-lapack-0.3:0 >app-eselect/eselect-lib-bin-symlink-0.1.1-r1:0 >app-eselect/eselect-pinentry-0.7.3:0 >app-i18n/man-pages-ja-20180315-r1:0 >app-i18n/man-pages-l10n-4.19.0:0 l10n_cs l10n_da l10n_de l10n_el l10n_es l10n_fi l10n_fr l10n_hu l10n_id l10n_it l10n_mk l10n_nb l10n_nl l10n_pl l10n_pt-BR l10n_ro l10n_ru l10n_sr l10n_sv l10n_uk l10n_vi >app-i18n/man-pages-zh_CN-1.6.4.0:0 >app-misc/ca-certificates-20240203.3.98:0 -cacert >app-misc/editor-wrapper-4-r1:0 >app-misc/mime-types-2.1.54:0 -nginx >app-misc/pax-utils-1.3.7:0 -caps -man -python -python_single_target_python3_10 python_single_target_python3_11 -seccomp -test >app-misc/tmux-3.4:0 debug -selinux -systemd -utempter -vim-syntax >app-portage/eix-0.36.7:0 debug -doc nls -sqlite >app-portage/elt-patches-20240315:0 >app-portage/gemato-20.5:0 gpg -pretty-log python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test -tools >app-portage/gentoolkit-0.6.5:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 >app-portage/getuto-1.11:0 -test >app-portage/portage-utils-0.96.1:0 openmp qmanifest qtegrity -static >app-shells/bash-5.2_p26:0 -afs -bashlogger -examples -mem-scramble net nls -pgo -plugins readline -verify-sig >app-shells/bash-completion-2.11:0 eselect -test >app-shells/gentoo-bashcomp-20230313:0 >app-shells/push-3.4:0 >app-shells/quoter-4.2:0 >app-text/ansifilter-2.20:0 -gui -verify-sig >app-text/asciidoc-10.2.0:0 -python_single_target_pypy3 -python_single_target_python3_10 python_single_target_python3_11 -python_single_target_python3_12 >app-text/build-docbook-catalog-2.4:0 >app-text/docbook-xml-dtd-4.5-r2:4.5 >app-text/docbook-xml-dtd-4.4-r3:4.4 >app-text/docbook-xml-dtd-4.2-r3:4.2 >app-text/docbook-xml-dtd-4.1.2-r7:4.1.2 >app-text/docbook-xsl-ns-stylesheets-1.79.1:0 -ruby >app-text/docbook-xsl-stylesheets-1.79.1-r4:0 -ruby >app-text/manpager-1:0 >app-text/opensp-1.5.2-r10:0 -doc nls -static-libs -test >app-text/po4a-0.71:0 -test -test >app-text/sgml-common-0.6.3-r7:0 >app-text/xmlto-0.0.28-r11:0 -latex text >dev-build/autoconf-2.72-r1:2.72 -emacs -verify-sig >dev-build/autoconf-archive-2023.02.20:0 >dev-build/autoconf-wrapper-20231224:0 >dev-build/automake-1.16.5-r2:1.16 -test >dev-build/automake-wrapper-20221207:0 >dev-build/b2-5.0.0:0 -examples >dev-build/cmake-3.28.3:0 -dap -doc -gui ncurses -qt6 -test -test -verify-sig >dev-build/gtk-doc-am-1.33.2:0 >dev-build/libtool-2.4.7-r2:2 -vanilla >dev-build/make-4.4.1-r1:0 -guile nls -static -verify-sig >dev-build/meson-1.4.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test -verify-sig >dev-build/meson-format-array-0:0 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 >dev-build/ninja-1.11.1-r5:0 -doc -test >dev-db/sqlite-3.45.1-r1:3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug -doc -icu readline -secure-delete -static-libs -tcl -test -tools >dev-lang/duktape-2.7.0-r3:0/2.7.0 >dev-lang/perl-5.38.2-r2:0/5.38 -berkdb debug -doc gdbm ithreads -minimal -quadmath >dev-lang/python-3.12.2_p1:3.12 -bluetooth -build debug ensurepip -examples gdbm -libedit ncurses -pgo readline sqlite ssl -test -tk -valgrind -verify-sig >dev-lang/python-3.11.8_p1:3.11 -bluetooth -build debug ensurepip -examples gdbm -libedit ncurses -pgo readline sqlite ssl -test -tk -valgrind -verify-sig >dev-lang/python-3.10.13_p3:3.10 -bluetooth -build debug ensurepip -examples gdbm -libedit ncurses -pgo readline sqlite ssl -test -tk -valgrind -verify-sig >dev-lang/python-exec-2.4.10:2 native-symlinks python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-lang/python-exec-conf-2.4.6:2 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 >dev-lang/tcl-8.6.14:0/8.6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug threads >dev-libs/boehm-gc-8.2.6:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 abi_x86_32 abi_x86_64 -abi_x86_x32 -cxx large -static-libs threads >dev-libs/boost-1.84.0-r3:0/1.84.0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 bzip2 context debug -doc -icu -lzma mpi nls -numpy -python python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 stacktrace -tools zlib -zstd >dev-libs/elfutils-0.191:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 bzip2 -debuginfod -lzma nls -static-libs -test utils -verify-sig -zstd >dev-libs/expat-2.6.2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -examples -static-libs -test unicode >dev-libs/glib-2.78.4-r1:2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -dbus debug elf -gtk-doc mime -selinux -static-libs -sysprof -systemtap -test -utils xattr >dev-libs/gmp-6.3.0-r1:0/10.4 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 asm cpudetection cxx -doc -pic -static-libs >dev-libs/gobject-introspection-1.78.1:0 -doctool -gtk-doc -python_single_target_python3_10 python_single_target_python3_11 -python_single_target_python3_12 -test >dev-libs/gobject-introspection-common-1.78.1:0 >dev-libs/isl-0.26:0/23 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs >dev-libs/jsoncpp-1.9.5:0/25 -doc -test >dev-libs/libassuan-2.5.7:0 -verify-sig >dev-libs/libatomic_ops-7.8.2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 abi_x86_32 abi_x86_64 -abi_x86_x32 >dev-libs/libbsd-0.11.8:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs -verify-sig >dev-libs/libevent-2.1.12-r1:0/2.1-7 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 clock-gettime debug -malloc-replacement ssl -static-libs -test -verbose-debug -verify-sig >dev-libs/libffi-3.4.6:0/8 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug -exec-static-trampoline -pax-kernel -static-libs -test >dev-libs/libgcrypt-1.10.3-r2:0/20 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 asm -cpu_flags_arm_aes -cpu_flags_arm_neon -cpu_flags_arm_sha1 -cpu_flags_arm_sha2 -cpu_flags_ppc_altivec -cpu_flags_ppc_vsx2 -cpu_flags_ppc_vsx3 cpu_flags_x86_aes cpu_flags_x86_avx cpu_flags_x86_avx2 -cpu_flags_x86_padlock -cpu_flags_x86_sha cpu_flags_x86_sse4_1 -doc getentropy -static-libs -verify-sig >dev-libs/libgpg-error-1.48:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -common-lisp nls -static-libs -test -verify-sig >dev-libs/libksba-1.6.6:0 -static-libs -verify-sig >dev-libs/libltdl-2.4.7-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs >dev-libs/libpcre2-10.43:0/3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 bzip2 jit -libedit pcre16 pcre32 readline -static-libs unicode -valgrind -verify-sig zlib >dev-libs/libpipeline-1.5.7:0 -test >dev-libs/libtasn1-4.19.0:0/6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs -test -verify-sig >dev-libs/libunistring-1.2:0/5 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc -static-libs >dev-libs/libuv-1.48.0:0/1 -verify-sig >dev-libs/libxml2-2.12.6:2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -debug -examples ftp -icu -lzma python python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 readline -static-libs -test >dev-libs/libxslt-1.1.39:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 crypt debug -examples -python python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -static-libs >dev-libs/lzo-2.10:2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -examples split-usr -static-libs >dev-libs/mpc-1.3.1:0/3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs >dev-libs/mpfr-4.2.1:0/6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs -verify-sig >dev-libs/nettle-3.9.1:0/8-6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 asm -cpu_flags_arm_aes -cpu_flags_arm_neon -cpu_flags_arm_sha1 -cpu_flags_arm_sha2 -cpu_flags_ppc_altivec -cpu_flags_ppc_vsx2 -cpu_flags_ppc_vsx3 cpu_flags_x86_aes cpu_flags_x86_pclmul -cpu_flags_x86_sha -doc gmp -static-libs -verify-sig >dev-libs/npth-1.7-r1:0 -test >dev-libs/openssl-3.2.1-r1:0/3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 asm cpu_flags_x86_sse2 -fips -ktls -rfc3779 -sctp -static-libs -test -tls-compression -vanilla -verify-sig -verify-sig -weak-ssl-ciphers >dev-libs/popt-1.19-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 nls -static-libs >dev-perl/Encode-EUCJPASCII-0.30.0-r1:0 -test >dev-perl/Encode-HanExtra-0.230.0-r3:0 >dev-perl/Encode-Locale-1.50.0-r1:0 -test >dev-perl/ExtUtils-CChecker-0.110.0:0 -test >dev-perl/File-BaseDir-0.90.0:0 -test >dev-perl/File-DesktopEntry-0.220.0-r1:0 -test >dev-perl/File-MimeInfo-0.330.0:0 -test >dev-perl/IO-Socket-SSL-2.85.0:0 -examples -idn -test >dev-perl/IPC-System-Simple-1.300.0:0 -test >dev-perl/Locale-gettext-1.70.0-r1:0 -test >dev-perl/MIME-Charset-1.13.1:0 l10n_ja l10n_zh -test >dev-perl/Module-Build-0.423.400:0 -test >dev-perl/Mozilla-CA-20999999-r1:0 -test >dev-perl/Net-SSLeay-1.940.0:0 -examples -examples -minimal -test >dev-perl/Pod-Parser-1.660.0:0 -test >dev-perl/Regexp-IPv6-0.30.0-r2:0 -test >dev-perl/SGMLSpm-1.1-r2:0 -test >dev-perl/Syntax-Keyword-Try-0.290.0:0 -test >dev-perl/TermReadKey-2.380.0-r1:0 -examples -test >dev-perl/Text-CharWidth-0.40.0-r2:0 -test >dev-perl/Text-WrapI18N-0.60.0-r2:0 -test >dev-perl/Unicode-LineBreak-2019.1.0:0 >dev-perl/URI-5.210.0:0 -test >dev-perl/XS-Parse-Keyword-0.380.0:0 -test >dev-perl/YAML-Tiny-1.740.0:0 -minimal -test >dev-python/certifi-3021.3.16-r4:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/charset-normalizer-3.3.2:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/cython-3.0.9:0 debug -doc python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/editables-0.5:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/ensurepip-pip-24.0:0 >dev-python/ensurepip-setuptools-69.2.0:0 >dev-python/ensurepip-wheels-100:0 >dev-python/flit-core-3.9.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/gentoo-common-1:0 >dev-python/gpep517-15:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/hatchling-1.21.1:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/idna-3.6:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/installer-0.7.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/jaraco-context-4.3.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/jaraco-functools-4.0.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/jaraco-text-3.12.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/jinja-3.1.3:0 -doc -examples python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/lxml-5.1.0:0 debug -doc -examples python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test threads >dev-python/markupsafe-2.1.5:0 debug python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/meson-python-0.15.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/more-itertools-10.2.0:0 -doc python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/nspektr-0.5.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/numpy-1.26.4:0 debug lapack python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/ordered-set-4.1.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/packaging-24.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/pathspec-0.12.1:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/platformdirs-4.2.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/pluggy-1.4.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/pyproject-metadata-0.7.1:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/pypy3-7.3.15:0/pypy310-pp73-384 gdbm ncurses sqlite -tk >dev-python/pypy3_10-7.3.15:0/pypy310-pp73-384 ensurepip gdbm jit ncurses sqlite -tk >dev-python/pypy3_10-exe-bin-7.3.15:7.3.15 >dev-python/PySocks-1.7.1-r2:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 >dev-python/requests-2.31.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -socks5 -test test-rust >dev-python/setuptools-69.2.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/setuptools-scm-8.0.4:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/tomli-2.0.1-r1:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/trove-classifiers-2024.3.3:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/typing-extensions-4.10.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-python/urllib3-2.2.1:0 -brotli -http2 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test -zstd >dev-python/wheel-0.43.0:0 python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test >dev-util/checkbashisms-2.23.5:0 >dev-util/desktop-file-utils-0.27-r1:0 >dev-util/glib-utils-2.78.4:0 -python_single_target_python3_10 python_single_target_python3_11 -python_single_target_python3_12 >dev-util/gperf-3.1-r2:0 >dev-util/patchelf-0.18.0:0 >dev-util/pkgconf-2.1.1:0/4 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 native-symlinks -test >dev-util/re2c-3.1:0 debug -test >dev-vcs/git-2.44.0:0 blksha1 -cgi curl -cvs -doc gpg -highlight iconv -keyring -mediawiki nls pcre -perforce -perl -python_single_target_python3_10 python_single_target_python3_11 -python_single_target_python3_12 safe-directory -selinux -subversion -test -tk webdav -xinetd >media-fonts/liberation-fonts-2.1.5:0 -X -X -fontforge >media-gfx/graphite2-1.3.14_p20210810-r3:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -perl -test >media-libs/fontconfig-2.15.0:1.0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc nls -test >media-libs/freetype-2.13.2:2 -X -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 adobe-cff -brotli bzip2 cleartype-hinting debug -doc -fontforge harfbuzz png -static-libs -svg -utils >media-libs/harfbuzz-8.3.0:0/6.0.0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 cairo debug -doc -experimental glib graphite -icu introspection -test truetype >media-libs/libpng-1.6.43:0/16 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -apng -cpu_flags_arm_neon cpu_flags_x86_sse -static-libs -test >net-dns/c-ares-1.27.0:0/2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs -test -verify-sig >net-dns/libidn2-2.3.7:0/2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 nls -static-libs -verify-sig >net-firewall/iptables-1.8.10-r1:0/1.8.3 -conntrack -netlink -nftables -pcap -static-libs -test >net-libs/gnutls-3.8.3:0/30.30 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -brotli cxx -dane -doc -examples idn nls openssl -pkcs11 seccomp -sslv2 -sslv3 -static-libs -test -test-full tls-heartbeat -tools -verify-sig zlib -zstd >net-libs/libmnl-1.0.5:0/0.2.0 -examples -verify-sig >net-libs/libnsl-2.0.1:0/3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs >net-libs/libpsl-0.21.5:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -icu idn -test >net-libs/libtirpc-1.3.4-r2:0/3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -kerberos -static-libs >net-libs/nghttp2-1.60.0:0/1.14 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug -hpack-tools -jemalloc -static-libs -systemd -test -utils -xml >net-misc/curl-8.6.0-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 adns alt-svc -brotli -curl_ssl_gnutls -curl_ssl_mbedtls curl_ssl_openssl -curl_ssl_rustls ftp -gnutls -gopher hsts http2 -idn imap -kerberos -ldap -mbedtls -nghttp3 openssl pop3 progress-meter psl -rtmp -rustls -samba smtp -ssh ssl -sslv3 -static-libs -telnet -test tftp -verify-sig -websockets -zstd >net-misc/dhcpcd-10.0.6-r2:0 debug embedded ipv6 -privsep udev >net-misc/iputils-20240117:0 arping -caps -clockdiff -doc filecaps -idn nls -test -tracepath >net-misc/netifrc-0.7.8:0 dhcp >net-misc/openssh-9.7_p1:0 -abi_mips_n32 -audit -debug -kerberos -ldns -libedit -livecd pam -pie -security-key -selinux ssl -static -test -verify-sig -xmss >net-misc/rsync-3.2.7-r4:0 acl -examples iconv -lz4 -python_single_target_python3_10 python_single_target_python3_11 -rrsync ssl -stunnel -system-zlib -verify-sig xattr -xxhash -zstd >net-misc/wget-1.21.4:0 -cookie-check debug -gnutls -idn ipv6 -metalink nls -ntlm pcre ssl -static -test -uuid -verify-sig zlib >perl-core/File-Temp-0.231.100:0 >perl-core/Math-BigInt-1.999.842:0 -examples -test >sci-libs/fftw-3.3.10:3.0/3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cpu_flags_arm_neon -cpu_flags_ppc_altivec cpu_flags_x86_avx cpu_flags_x86_avx2 cpu_flags_x86_fma3 -cpu_flags_x86_fma4 cpu_flags_x86_sse cpu_flags_x86_sse2 -doc fortran -mpi openmp -test threads -zbus >sci-libs/hdf5-1.14.3-r1:0/1.14.3 -cxx debug -examples fortran hl mpi -szip -test -threads -unsupported zlib >sci-libs/lapack-3.12.0-r1:0 -deprecated -doc eselect-ldso -lapacke -test >sci-libs/openblas-0.3.26:0 -dynamic eselect-ldso -index-64bit openmp -pthread -relapack -test >sec-keys/openpgp-keys-gentoo-release-20230329:0 -test >sys-apps/acl-2.3.2-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 nls -static-libs >sys-apps/attr-2.5.2-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug nls -static-libs >sys-apps/baselayout-2.15:0 -build split-usr >sys-apps/coreutils-9.4-r1:0 acl -caps -gmp -hostname -kill -multicall nls openssl -selinux split-usr -static -test -vanilla -verify-sig xattr >sys-apps/dbus-1.15.8:0 -X -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug -doc elogind -selinux -static-libs -systemd -test -test -valgrind >sys-apps/diffutils-3.10:0 nls -verify-sig >sys-apps/file-5.45-r4:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 bzip2 -lzip -lzma -python python_targets_python3_10 python_targets_python3_11 -seccomp -static-libs -verify-sig zlib -zstd >sys-apps/findutils-4.9.0-r2:0 nls -selinux -static -test -verify-sig >sys-apps/gawk-5.3.0-r1:0 -mpfr nls -pma readline -verify-sig >sys-apps/gentoo-functions-0.19:0 >sys-apps/grep-3.11:0 egrep-fgrep nls pcre -static -verify-sig >sys-apps/groff-1.23.0:0 -X -examples -uchardet >sys-apps/help2man-1.49.3:0 nls >sys-apps/hwdata-0.376:0 >sys-apps/hwloc-2.9.3:0/15 -X -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cairo cpuid -cuda debug -nvml pci -static-libs -svg -udev -valgrind -video_cards_nvidia -xml >sys-apps/install-xattr-0.8-r1:0 >sys-apps/iproute2-6.6.0-r3:0 -atm -berkdb -bpf -caps -elf iptables -minimal -nfs -selinux >sys-apps/kbd-2.6.4:0 nls pam -selinux -test >sys-apps/kmod-32-r1:0 debug -doc lzma -pkcs7 split-usr -static-libs tools zlib zstd >sys-apps/less-643-r1:0 pcre -test >sys-apps/locale-gen-2.23-r1:0 >sys-apps/man-db-2.12.0:0 manpager nls seccomp -selinux -static-libs zlib >sys-apps/man-pages-6.06:0 l10n_cs l10n_da l10n_de l10n_el l10n_es l10n_fi l10n_fr l10n_hu l10n_id l10n_it l10n_ja l10n_mk l10n_nb l10n_nl l10n_pl l10n_pt-BR l10n_ro l10n_ru l10n_sr l10n_sv l10n_uk l10n_vi l10n_zh-CN -verify-sig >sys-apps/miscfiles-1.5-r4:0 -minimal >sys-apps/net-tools-2.10:0 arp hostname ipv6 -nis nls -plipconfig -selinux -slattach -static >sys-apps/openrc-0.53:0 -audit -bash debug ncurses netifrc -newnet pam -s6 -selinux -sysv-utils sysvinit unicode >sys-apps/pciutils-3.11.1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -dns kmod -static-libs udev zlib >sys-apps/portage-3.0.63:0 -apidoc -build -doc -gentoo-dev ipc native-extensions python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 rsync-verify -selinux -test xattr >sys-apps/sandbox-2.38:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 abi_x86_32 abi_x86_64 -abi_x86_x32 nnp >sys-apps/sed-4.9:0 acl nls -selinux -static -verify-sig >sys-apps/shadow-4.14.6:0/4 acl -audit -cracklib nls pam -selinux -skey split-usr -su -systemd -verify-sig xattr >sys-apps/systemd-utils-254.10:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 acl -boot -kernel-install kmod -python_single_target_python3_10 python_single_target_python3_11 -python_single_target_python3_12 -secureboot -selinux split-usr -sysusers -test tmpfiles udev -ukify >sys-apps/sysvinit-3.08:0 -ibm nls -selinux -static -verify-sig >sys-apps/texinfo-7.1-r1:0 nls standalone -static >sys-apps/util-linux-2.39.3-r3:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -audit -build -caps cramfs -cryptsetup -fdformat hardlink -kill logger -magic ncurses nls pam -python python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 readline -rtas -selinux -slang -static-libs su suid -systemd -test -tty-helpers -udev unicode -verify-sig >sys-apps/which-2.21:0 >sys-auth/elogind-252.9:0 acl -audit cgroup-hybrid debug -doc pam policykit -selinux -test >sys-auth/pambase-20240128:0 -caps -debug elogind -gnome-keyring -homed -minimal -mktemp nullok -pam_krb5 -pam_ssh passwdqc -pwhistory -pwquality -securetty -selinux sha512 -sssd -systemd -yescrypt >sys-auth/passwdqc-2.0.3-r1:0 >sys-auth/polkit-124-r1:0 daemon duktape -examples -gtk introspection -kde pam -selinux -systemd -test >sys-cluster/openmpi-4.1.6:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cma -cuda cxx fortran ipv6 -libompitrace -openmpi_fabrics_knem -openmpi_fabrics_ofed -openmpi_ofed_features_control-hdr-padding -openmpi_ofed_features_dynamic-sl -openmpi_ofed_features_rdmacm -openmpi_ofed_features_udcm -openmpi_rm_pbs -openmpi_rm_slurm -peruse -romio -valgrind >sys-devel/bc-1.07.1-r6:0 -libedit readline -static >sys-devel/binutils-2.42-r1:2.42 -cet -debuginfod -doc -gold -gprofng -hardened -multitarget nls -pgo plugins -static-libs -test -vanilla -zstd >sys-devel/binutils-config-5.5:0 native-symlinks >sys-devel/bison-3.8.2-r2:0 -examples nls -static -test -verify-sig >sys-devel/flex-2.6.4-r6:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 nls -static -test >sys-devel/gcc-13.2.1_p20240210:13 -ada -cet -custom-cflags cxx -d -debug -default-stack-clash-protection -default-znow -doc -fixed-point fortran -go graphite -hardened -ieee-long-double -jit -libssp lto -modula2 multilib nls -objc -objc++ -objc-gc openmp -pch -pgo pie sanitize ssp -systemtap -test -valgrind -vanilla -vtv -zstd >sys-devel/gcc-config-2.11:0 cc-wrappers native-symlinks >sys-devel/gettext-0.22.5:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 acl cxx -doc -emacs -git -java -java ncurses nls openmp -static-libs -verify-sig xattr >sys-devel/gnuconfig-20230731:0 >sys-devel/m4-1.4.19-r2:0 -examples nls -verify-sig >sys-devel/patch-2.7.6-r5:0 -static -test -verify-sig xattr >sys-fs/e2fsprogs-1.47.0-r3:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cron -fuse nls -static-libs -test tools >sys-fs/udev-init-scripts-35:0 >sys-kernel/dracut-060_pre20240104-r3:0 -selinux -test >sys-kernel/gentoo-kernel-bin-6.1.82:6.1.82 initramfs -test >sys-kernel/installkernel-28:0 dracut -grub -refind -systemd -systemd-boot -uki -ukify >sys-kernel/linux-headers-6.7:0 -headers-only >sys-libs/gdbm-1.23:0/6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 berkdb nls readline -static-libs -test -verify-sig >sys-libs/glibc-2.39-r2:2.2 -audit -caps -cet -compile-locales -custom-cflags -doc -gd -hash-sysv-compat -headers-only multiarch multilib -multilib-bootstrap -nscd -perl -profile -selinux ssp stack-realign static-libs -suid -systemd -systemtap -test -vanilla >sys-libs/libcap-2.69-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 pam -static-libs -tools >sys-libs/libseccomp-2.5.5-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug -experimental-loong -python python_targets_python3_10 python_targets_python3_11 -static-libs -test >sys-libs/libxcrypt-4.4.36-r3:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 abi_x86_32 abi_x86_64 -abi_x86_x32 compat -headers-only -static-libs system -test >sys-libs/ncurses-6.4_p20230401:0/6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -ada cxx debug -doc -gpm -minimal -profile split-usr -split-usr stack-realign -static-libs -test tinfo -trace -verify-sig >sys-libs/pam-1.5.3-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -audit -berkdb -debug filecaps -nis -selinux >sys-libs/readline-8.2_p10:0/8 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs unicode -utils -verify-sig >sys-libs/timezone-data-2024a-r1:0 -leaps-timezone nls -zic-slim >sys-libs/zlib-1.3.1-r1:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 minizip -static-libs -verify-sig >sys-process/procps-4.0.4-r1:0/0-ng -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 elogind kill -modern-top ncurses nls -selinux -static-libs -systemd -test unicode >sys-process/psmisc-23.7:0 -X -apparmor nls -selinux -test >virtual/acl-0-r2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs >virtual/cblas-3.8:0 eselect-ldso >virtual/dev-manager-0-r2:0 >virtual/dist-kernel-6.1.82:0/6.1.82 >virtual/editor-0-r7:0 >virtual/fortran-0-r1:0 openmp >virtual/lapack-3.10:0 -eselect-ldso >virtual/libc-1-r1:0 >virtual/libcrypt-2-r1:0/2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs >virtual/libelf-3-r1:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 >virtual/libiconv-0-r2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 >virtual/libintl-0-r2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 >virtual/libudev-251-r2:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -systemd >virtual/man-0-r4:0 >virtual/mpi-2.0-r7:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 cxx fortran -nullmpi romio threads >virtual/openssh-0:0 ssl >virtual/os-headers-0-r2:0 >virtual/package-manager-1:0 >virtual/pager-0-r1:0 >virtual/perl-bignum-0.660.0:0 >virtual/perl-Carp-1.540.0:0 >virtual/perl-CPAN-2.360.0:0 >virtual/perl-CPAN-Meta-2.150.10-r7:0 >virtual/perl-CPAN-Meta-YAML-0.18.0-r9:0 >virtual/perl-Data-Dumper-2.188.0:0 >virtual/perl-Encode-3.190.0:0 >virtual/perl-Exporter-5.770.0-r1:0 >virtual/perl-ExtUtils-CBuilder-0.280.238:0 >virtual/perl-ExtUtils-Install-2.220.0:0 >virtual/perl-ExtUtils-MakeMaker-7.700.0:0 >virtual/perl-ExtUtils-Manifest-1.730.0-r2:0 >virtual/perl-ExtUtils-ParseXS-3.510.0:0 >virtual/perl-File-Path-2.180.0-r2:0 >virtual/perl-File-Spec-3.880.0:0 >virtual/perl-File-Temp-0.231.100:0 >virtual/perl-Getopt-Long-2.540.0:0 >virtual/perl-JSON-PP-4.160.0-r1:0 >virtual/perl-libnet-3.150.0:0 ssl >virtual/perl-Math-BigInt-1.999.842:0 >virtual/perl-Math-BigInt-FastCalc-0.501.300:0 >virtual/perl-Math-BigRat-0.262.400:0 >virtual/perl-Math-Complex-1.620.0:0 >virtual/perl-MIME-Base64-3.160.100_rc:0 >virtual/perl-Module-Metadata-1.0.37-r3:0 >virtual/perl-parent-0.241.0:0 >virtual/perl-Parse-CPAN-Meta-2.150.10-r7:0 >virtual/perl-Perl-OSType-1.10.0-r7:0 >virtual/perl-podlators-5.10.0:0 >virtual/perl-Scalar-List-Utils-1.630.0:0 >virtual/perl-Test-Harness-3.440.0-r1:0 >virtual/perl-Text-ParseWords-3.310.0-r1:0 >virtual/perl-Unicode-Collate-1.310.0-r1:0 >virtual/perl-version-0.992.900-r1:0 >virtual/pkgconfig-3:0 native-symlinks >virtual/service-manager-1-r1:0 >virtual/ssh-0-r2:0 -minimal >virtual/tmpfiles-0-r5:0 -systemd >virtual/ttf-fonts-1-r2:0 >virtual/udev-217-r7:0 -systemd >virtual/w3m-1:0 >www-client/pybugz-0.14:0 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 >www-client/w3m-0.5.3_p20230121:0 -X -fbcon -gdk-pixbuf -gpm -imlib l10n_ja -lynxkeymap nls -nntp ssl unicode -xface >x11-base/xcb-proto-1.16.0:0 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 >x11-base/xorg-proto-2023.2:0 -test >x11-libs/cairo-1.18.0:0 X -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -aqua -debug glib -gtk-doc -test >x11-libs/libpciaccess-0.18:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 zlib >x11-libs/libX11-1.8.7:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc -test >x11-libs/libXau-1.0.11:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc >x11-libs/libxcb-1.16.1:0/1.12 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc -doc -selinux -test xkb >x11-libs/libXdmcp-1.1.5:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc >x11-libs/libXext-1.3.6:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc >x11-libs/libXrender-0.9.11:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 >x11-libs/pixman-0.43.4:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cpu_flags_arm_iwmmxt -cpu_flags_arm_iwmmxt2 -cpu_flags_arm_neon -cpu_flags_ppc_altivec cpu_flags_x86_mmxext cpu_flags_x86_sse2 cpu_flags_x86_ssse3 -loongson2f -static-libs -test >x11-libs/xtrans-1.5.0:0 -doc >x11-misc/compose-tables-1.8.7:0 >x11-misc/shared-mime-info-2.4-r1:0 -test >x11-misc/xdg-utils-1.2.1-r1:0 -X -dbus -doc -gnome > > >############# ># build.log # >############# > > * Using python3.11 to build >>>> Unpacking source... >>>> Unpacking espresso-4.2.0.tar.gz to /var/tmp/portage/sci-physics/espresso-4.2.0/work >>>> Source unpacked in /var/tmp/portage/sci-physics/espresso-4.2.0/work >>>> Preparing source in /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso ... > * Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso" > * Build directory (BUILD_DIR): "/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build" > * Applying espresso-4.2.0-fix-disable-test.patch ... > [ ok ] > * Hardcoded definition(s) removed in libs/h5xx/example/CMakeLists.txt: > * set(CMAKE_BUILD_TYPE "Release") >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso ... > * Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso" > * Build directory (BUILD_DIR): "/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build" >cmake -C /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DWITH_CUDA=no -DPYTHON_EXECUTABLE=/usr/bin/python3.11 -DWITH_TESTS=no -DINSTALL_PYPRESSO=OFF -DCMAKE_DISABLE_FIND_PACKAGE_FFTW3=no -DWITH_HDF5=yes -DCMAKE_DISABLE_FIND_PACKAGE_HDF5=no -DCMAKE_SKIP_RPATH=YES -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/gentoo_toolchain.cmake /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso >loading initial cache file /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/gentoo_common_config.cmake >-- CMake version: 3.28.3 >-- The CXX compiler identification is GNU 13.2.1 >-- Detecting CXX compiler ABI info >-- Detecting CXX compiler ABI info - done >-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++ - skipped >-- Detecting CXX compile features >-- Detecting CXX compile features - done >-- The C compiler identification is GNU 13.2.1 >-- Detecting C compiler ABI info >-- Detecting C compiler ABI info - done >-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc - skipped >-- Detecting C compile features >-- Detecting C compile features - done >CMake Warning at cmake/option_enum.cmake:29 (message): > Unknown build type 'Gentoo', defaulting to 'Release' >Call Stack (most recent call first): > CMakeLists.txt:57 (option_enum) > > >-- Config file: /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config/myconfig-default.hpp >-- Performing Test result__PRETTY_FUNCTION__ >-- Performing Test result__PRETTY_FUNCTION__ - Success >CMake Warning (dev) at CMakeLists.txt:174 (find_package): > Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules > are removed. Run "cmake --help-policy CMP0148" for policy details. Use > the cmake_policy command to set the policy and suppress this warning. > >This warning is for project developers. Use -Wno-dev to suppress it. > >-- Found PythonInterp: /usr/bin/python3.11 (found suitable version "3.11.8", minimum required is "3.8") >-- Found Cython: /usr/bin/python3.11;-m;cython (found suitable version "3.0.9", minimum required is "0.29.14") >-- Found PythonHeaders: /usr/include/python3.11 >-- Found NumPy: /usr/lib/python3.11/site-packages/numpy/core/include (found version "1.26.4") >-- Found FFTW3: /usr/lib64/libfftw3.so >-- Found HDF5: /usr/lib64/libhdf5.so;/usr/lib64/libz.so;/usr/lib64/libdl.a;/usr/lib64/libm.so (found suitable version "1.14.3", minimum required is "1.8") found components: C >-- Could NOT find GSL (missing: GSL_INCLUDE_DIR GSL_LIBRARY) (found version "") >-- Found MPI_C: /usr/lib64/libmpi.so (found suitable version "3.1", minimum required is "3.0") >-- Found MPI_CXX: /usr/lib64/libmpi_cxx.so (found suitable version "3.1", minimum required is "3.0") >-- Found MPI: TRUE (found suitable version "3.1", minimum required is "3.0") >-- Found MpiexecBackend: /usr/bin/mpiexec >-- Found Boost: /usr/lib64/cmake/Boost-1.84.0/BoostConfig.cmake (found suitable version "1.84.0", minimum required is "1.69.0") found components: mpi serialization filesystem system >-- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) >-- Could NOT find Sphinx (missing: SPHINX_API_DOC_EXE) (Required is at least version "2.3.0") >-- Found Git: /usr/bin/git (found version "2.44.0") >-- The following features have been enabled: > > * HDF5 (required version >= 1.8), parallel > >-- The following OPTIONAL packages have been found: > > * FFTW3 > * MpiexecBackend > * Git > >-- The following REQUIRED packages have been found: > > * PythonInterp (required version >= 3.8) > * Cython (required version >= 0.29.14) > * PythonHeaders > * NumPy > * HDF5 (required version >= 1.8), parallel > * MPI > * boost_mpi (required version == 1.84.0) > * boost_serialization (required version == 1.84.0) > * boost_atomic (required version == 1.84.0) > * boost_filesystem (required version == 1.84.0) > * boost_headers (required version == 1.84.0) > * boost_system (required version == 1.84.0) > * Boost (required version >= 1.69.0) > >-- The following OPTIONAL packages have not been found: > > * GSL > * Doxygen > * Sphinx (required version >= 2.3.0) > >-- <<< Gentoo configuration >>> >Build type Release >Install path /usr >Compiler flags: >C -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 >C++ -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 >Linker flags: >Executable -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 >Module -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 >Shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 > >-- Configuring done (3.7s) >-- Generating done (0.2s) >-- Build files have been written to: /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso ... > * Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso" > * Build directory (BUILD_DIR): "/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build" >make -j25 VERBOSE=1 >/usr/bin/cmake -S/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso -B/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build --check-build-system CMakeFiles/Makefile.cmake 0 >/usr/bin/cmake -E cmake_progress_start /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/CMakeFiles /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build//CMakeFiles/progress.marks >make -f CMakeFiles/Makefile2 all >make[1]: Entering directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >make -f src/shapes/CMakeFiles/Espresso_shapes.dir/build.make src/shapes/CMakeFiles/Espresso_shapes.dir/depend >make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/depend >make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/depend >make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/depend >make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/depend >make[2]: Entering directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/shapes 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Makefiles" /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/CMakeFiles/myconfig.dir/DependInfo.cmake "--color=" >make[2]: Entering directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config 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'/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >make -f src/config/CMakeFiles/generate_config_features.dir/build.make src/config/CMakeFiles/generate_config_features.dir/build >make -f src/shapes/CMakeFiles/Espresso_shapes.dir/build.make src/shapes/CMakeFiles/Espresso_shapes.dir/build >make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >make -f src/config/CMakeFiles/version.dir/build.make src/config/CMakeFiles/version.dir/build >make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >make -f CMakeFiles/myconfig.dir/build.make CMakeFiles/myconfig.dir/build >make[2]: Entering directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >make -f src/python/object_in_fluid/CMakeFiles/object_in_fluid.dir/build.make 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/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/python/object_in_fluid && /usr/bin/cmake -E copy /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/python/object_in_fluid/__init__.py /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/python/object_in_fluid//__init__.py >[ 0%] Building CXX object src/shapes/CMakeFiles/Espresso_shapes.dir/src/HollowConicalFrustum.cpp.o >[ 0%] Generating config-features.hpp, config-features.cpp >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config && /usr/bin/python3.11 /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config/gen_featureconfig.py /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config/features.def /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config/config-features.hpp /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config/config-features.cpp >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/shapes && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_shapes_EXPORTS -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/shapes/CMakeFiles/Espresso_shapes.dir/src/HollowConicalFrustum.cpp.o -MF CMakeFiles/Espresso_shapes.dir/src/HollowConicalFrustum.cpp.o.d -o CMakeFiles/Espresso_shapes.dir/src/HollowConicalFrustum.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/src/HollowConicalFrustum.cpp >[ 1%] Building CXX object src/shapes/CMakeFiles/Espresso_shapes.dir/src/Cylinder.cpp.o >[ 1%] Building CXX object src/shapes/CMakeFiles/Espresso_shapes.dir/src/Rhomboid.cpp.o >[ 1%] Building CXX object src/shapes/CMakeFiles/Espresso_shapes.dir/src/SimplePore.cpp.o >[ 1%] Built target myconfig >[ 1%] Building CXX object src/shapes/CMakeFiles/Espresso_shapes.dir/src/Ellipsoid.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/shapes && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_shapes_EXPORTS -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG 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-I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/shapes/CMakeFiles/Espresso_shapes.dir/src/Rhomboid.cpp.o -MF CMakeFiles/Espresso_shapes.dir/src/Rhomboid.cpp.o.d -o CMakeFiles/Espresso_shapes.dir/src/Rhomboid.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/src/Rhomboid.cpp >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/shapes && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_shapes_EXPORTS -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/shapes/CMakeFiles/Espresso_shapes.dir/src/SimplePore.cpp.o -MF CMakeFiles/Espresso_shapes.dir/src/SimplePore.cpp.o.d -o CMakeFiles/Espresso_shapes.dir/src/SimplePore.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/src/SimplePore.cpp >[ 2%] Building CXX object src/shapes/CMakeFiles/Espresso_shapes.dir/src/SpheroCylinder.cpp.o >cd 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/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/src/Ellipsoid.cpp >make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/depend >[ 4%] Building CXX object src/shapes/CMakeFiles/Espresso_shapes.dir/src/Torus.cpp.o >[ 4%] Building CXX object src/shapes/CMakeFiles/Espresso_shapes.dir/src/Wall.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/shapes && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_shapes_EXPORTS -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/shapes/CMakeFiles/Espresso_shapes.dir/src/Slitpore.cpp.o -MF CMakeFiles/Espresso_shapes.dir/src/Slitpore.cpp.o.d -o CMakeFiles/Espresso_shapes.dir/src/Slitpore.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/src/Slitpore.cpp >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/shapes && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_shapes_EXPORTS -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/shapes/CMakeFiles/Espresso_shapes.dir/src/Sphere.cpp.o -MF CMakeFiles/Espresso_shapes.dir/src/Sphere.cpp.o.d -o CMakeFiles/Espresso_shapes.dir/src/Sphere.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/src/Sphere.cpp >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/shapes && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_shapes_EXPORTS -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/shapes/CMakeFiles/Espresso_shapes.dir/src/SpheroCylinder.cpp.o -MF CMakeFiles/Espresso_shapes.dir/src/SpheroCylinder.cpp.o.d -o CMakeFiles/Espresso_shapes.dir/src/SpheroCylinder.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/src/SpheroCylinder.cpp >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/python/object_in_fluid && /usr/bin/cmake -E copy /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/python/object_in_fluid/oif_classes.py /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/python/object_in_fluid//oif_classes.py >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/shapes && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_shapes_EXPORTS -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/shapes/CMakeFiles/Espresso_shapes.dir/src/Torus.cpp.o -MF CMakeFiles/Espresso_shapes.dir/src/Torus.cpp.o.d -o CMakeFiles/Espresso_shapes.dir/src/Torus.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/src/Torus.cpp >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/shapes && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_shapes_EXPORTS -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/shapes/CMakeFiles/Espresso_shapes.dir/src/Wall.cpp.o -MF CMakeFiles/Espresso_shapes.dir/src/Wall.cpp.o.d -o CMakeFiles/Espresso_shapes.dir/src/Wall.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/src/Wall.cpp >fatal: not a git repository (or any parent up to mount point /var/tmp) >Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). >make[2]: Entering directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config/CMakeFiles/check_myconfig.dir/DependInfo.cmake "--color=" >fatal: not a git repository (or any parent up to mount point /var/tmp) >Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). >fatal: not a git repository (or any parent up to mount point /var/tmp) >Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/python/object_in_fluid && /usr/bin/cmake -E copy /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/python/object_in_fluid/oif_utils.py /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/python/object_in_fluid//oif_utils.py >make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >make -f src/config/CMakeFiles/check_myconfig.dir/build.make src/config/CMakeFiles/check_myconfig.dir/build >make[2]: Entering directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config && /usr/bin/python3.11 /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config/check_myconfig.py /usr/bin/x86_64-pc-linux-gnu-g++ /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config/features.def /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config/myconfig-final.hpp cmake_config.hpp >make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >[ 4%] Built target version >[ 4%] Built target object_in_fluid >Reading definitions from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config/features.def... >Done. >Writing /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config/config-features.hpp... >Done. >Writing /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config/config-features.cpp... >Done. >make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >[ 4%] Built target generate_config_features >make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >[ 4%] Built target check_myconfig >make -f src/config/CMakeFiles/Espresso_config.dir/build.make src/config/CMakeFiles/Espresso_config.dir/depend >make[2]: Entering directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config/CMakeFiles/Espresso_config.dir/DependInfo.cmake "--color=" >make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >make -f src/config/CMakeFiles/Espresso_config.dir/build.make src/config/CMakeFiles/Espresso_config.dir/build >make[2]: Entering directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >[ 4%] Building CXX object src/config/CMakeFiles/Espresso_config.dir/config-features.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config && /usr/bin/x86_64-pc-linux-gnu-g++ -DEspresso_config_EXPORTS -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -MD -MT src/config/CMakeFiles/Espresso_config.dir/config-features.cpp.o -MF CMakeFiles/Espresso_config.dir/config-features.cpp.o.d -o CMakeFiles/Espresso_config.dir/config-features.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config/config-features.cpp >[ 4%] Linking CXX shared library Espresso_config.so >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config && /usr/bin/cmake -E cmake_link_script CMakeFiles/Espresso_config.dir/link.txt --verbose=1 >/usr/bin/x86_64-pc-linux-gnu-g++ -fPIC -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -shared -Wl,-soname,Espresso_config.so -o Espresso_config.so "CMakeFiles/Espresso_config.dir/config-features.cpp.o" >make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >[ 4%] Built target Espresso_config >make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/depend >make[2]: Entering directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >[ 4%] Generating gen_pxiconfig.cpp >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/python/espressomd && /usr/bin/python3.11 /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/python/espressomd/gen_pxiconfig.py /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config/features.def /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/python/espressomd/gen_pxiconfig.cpp >Reading definitions from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config/features.def... >Done. >Writing /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/python/espressomd/gen_pxiconfig.cpp... >Done. >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/python/espressomd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/python/espressomd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/DependInfo.cmake "--color=" >make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >make -f src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build.make src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/build >make[2]: Entering directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >[ 5%] Building CXX object src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/python/espressomd && /usr/bin/x86_64-pc-linux-gnu-g++ -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -MD -MT src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o -MF CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o.d -o CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/python/espressomd/gen_pxiconfig.cpp >[ 5%] Linking CXX executable gen_pxiconfig >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/gen_pxiconfig.dir/link.txt --verbose=1 >/usr/bin/x86_64-pc-linux-gnu-g++ -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o -o gen_pxiconfig ../../config/Espresso_config.so >make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >[ 5%] Built target gen_pxiconfig >[ 5%] Linking CXX shared library Espresso_shapes.so >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/shapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/Espresso_shapes.dir/link.txt --verbose=1 >/usr/bin/x86_64-pc-linux-gnu-g++ -fPIC -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -Wl,-rpath -Wl,/usr/lib64 -Wl,-rpath -Wl,/usr/lib64 -Wl,--enable-new-dtags -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -shared -Wl,-soname,Espresso_shapes.so -o Espresso_shapes.so CMakeFiles/Espresso_shapes.dir/src/HollowConicalFrustum.cpp.o CMakeFiles/Espresso_shapes.dir/src/Cylinder.cpp.o CMakeFiles/Espresso_shapes.dir/src/Ellipsoid.cpp.o CMakeFiles/Espresso_shapes.dir/src/Rhomboid.cpp.o CMakeFiles/Espresso_shapes.dir/src/SimplePore.cpp.o CMakeFiles/Espresso_shapes.dir/src/Slitpore.cpp.o CMakeFiles/Espresso_shapes.dir/src/Sphere.cpp.o CMakeFiles/Espresso_shapes.dir/src/SpheroCylinder.cpp.o CMakeFiles/Espresso_shapes.dir/src/Torus.cpp.o CMakeFiles/Espresso_shapes.dir/src/Wall.cpp.o /usr/lib64/libboost_mpi.so.1.84.0 /usr/lib64/libboost_serialization.so.1.84.0 /usr/lib64/libmpi_cxx.so /usr/lib64/libmpi.so >make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >[ 5%] Built target Espresso_shapes >make -f src/core/CMakeFiles/Espresso_core.dir/build.make src/core/CMakeFiles/Espresso_core.dir/depend >make[2]: Entering directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/core 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src/core/CMakeFiles/Espresso_core.dir/grid_based_algorithms/lb_boundaries.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_core_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core -I/io/writer -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem 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-I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core -I/io/writer -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/Random123-1.09/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/particle_observables/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/core/CMakeFiles/Espresso_core.dir/nonbonded_interactions/ljgen.cpp.o -MF CMakeFiles/Espresso_core.dir/nonbonded_interactions/ljgen.cpp.o.d -o CMakeFiles/Espresso_core.dir/nonbonded_interactions/ljgen.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/nonbonded_interactions/ljgen.cpp >[ 50%] Building CXX object src/core/CMakeFiles/Espresso_core.dir/nonbonded_interactions/morse.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_core_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core -I/io/writer -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/Random123-1.09/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/particle_observables/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/core/CMakeFiles/Espresso_core.dir/nonbonded_interactions/morse.cpp.o -MF CMakeFiles/Espresso_core.dir/nonbonded_interactions/morse.cpp.o.d -o CMakeFiles/Espresso_core.dir/nonbonded_interactions/morse.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/nonbonded_interactions/morse.cpp >[ 50%] Building CXX object src/core/CMakeFiles/Espresso_core.dir/nonbonded_interactions/nonbonded_interaction_data.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_core_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core -I/io/writer -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/Random123-1.09/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/particle_observables/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/core/CMakeFiles/Espresso_core.dir/nonbonded_interactions/nonbonded_interaction_data.cpp.o -MF CMakeFiles/Espresso_core.dir/nonbonded_interactions/nonbonded_interaction_data.cpp.o.d -o CMakeFiles/Espresso_core.dir/nonbonded_interactions/nonbonded_interaction_data.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/nonbonded_interactions/nonbonded_interaction_data.cpp >In file included from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace.hpp:16, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/attribute/attribute.hpp:17, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/attribute.hpp:17, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/h5xx.hpp:23, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/io/writer/h5md_specification.hpp:24, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/io/writer/h5md_specification.cpp:22: >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:52:5: error: âtemplate<long unsigned int N> h5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&)â cannot be overloaded with âtemplate<long unsigned int N> h5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&)â > 52 | dataspace(boost::array<hsize_t, N> const& dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:50:5: note: previous declaration âtemplate<long unsigned int N> h5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&)â > 50 | dataspace(boost::array<std::size_t, N> const& dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:56:5: error: âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&)â cannot be overloaded with âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&)â > 56 | dataspace(std::vector<hsize_t> const& dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:55:5: note: previous declaration âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&)â > 55 | dataspace(std::vector<std::size_t> const& dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:62:5: error: âtemplate<long unsigned int N> h5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&, const boost::array<long unsigned int, NumDims>&)â cannot be overloaded with âtemplate<long unsigned int N> h5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&, const boost::array<long unsigned int, NumDims>&)â > 62 | dataspace(boost::array<hsize_t, N> const& dims, boost::array<hsize_t, N> const& max_dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:60:5: note: previous declaration âtemplate<long unsigned int N> h5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&, const boost::array<long unsigned int, NumDims>&)â > 60 | dataspace(boost::array<size_t, N> const& dims, boost::array<size_t, N> const& max_dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:66:5: error: âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&, const std::vector<long unsigned int>&)â cannot be overloaded with âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&, const std::vector<long unsigned int>&)â > 66 | dataspace(std::vector<hsize_t> const& dims, std::vector<hsize_t> const& max_dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:65:5: note: previous declaration âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&, const std::vector<long unsigned int>&)â > 65 | dataspace(std::vector<size_t> const& dims, std::vector<size_t> const& max_dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:193:8: error: redefinition of âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&)â > 193 | inline dataspace::dataspace(std::vector<hsize_t> const& dims) > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:186:8: note: âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&)â previously defined here > 186 | inline dataspace::dataspace(std::vector<std::size_t> const& dims) > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:207:1: error: redefinition of âh5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&)â > 207 | dataspace::dataspace(boost::array<hsize_t, N> const& dims) > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:200:1: note: âh5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&)â previously declared here > 200 | dataspace::dataspace(boost::array<std::size_t, N> const& dims) > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:222:8: error: redefinition of âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&, const std::vector<long unsigned int>&)â > 222 | inline dataspace::dataspace(std::vector<hsize_t> const& dims, std::vector<hsize_t> const& max_dims) > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:214:8: note: âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&, const std::vector<long unsigned int>&)â previously defined here > 214 | inline dataspace::dataspace(std::vector<size_t> const& dims, std::vector<size_t> const& max_dims) > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:238:1: error: redefinition of âh5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&, const boost::array<long unsigned int, NumDims>&)â > 238 | dataspace::dataspace(boost::array<hsize_t, N> const& dims, boost::array<hsize_t, N> const& max_dims) > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:229:1: note: âh5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&, const boost::array<long unsigned int, NumDims>&)â previously declared here > 229 | dataspace::dataspace(boost::array<size_t, N> const& dims, boost::array<size_t, N> const& max_dims) > | ^~~~~~~~~ >[ 50%] Building CXX object src/core/CMakeFiles/Espresso_core.dir/nonbonded_interactions/nonbonded_tab.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_core_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core -I/io/writer -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/Random123-1.09/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/particle_observables/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/core/CMakeFiles/Espresso_core.dir/nonbonded_interactions/nonbonded_tab.cpp.o -MF CMakeFiles/Espresso_core.dir/nonbonded_interactions/nonbonded_tab.cpp.o.d -o CMakeFiles/Espresso_core.dir/nonbonded_interactions/nonbonded_tab.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/nonbonded_interactions/nonbonded_tab.cpp >In file included from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace.hpp:16, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/attribute/attribute.hpp:17, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/attribute.hpp:17, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/h5xx.hpp:23, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/io/writer/h5md_specification.hpp:24, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/io/writer/h5md_core.hpp:27, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/io/writer/h5md_core.cpp:22: >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:52:5: error: âtemplate<long unsigned int N> h5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&)â cannot be overloaded with âtemplate<long unsigned int N> h5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&)â > 52 | dataspace(boost::array<hsize_t, N> const& dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:50:5: note: previous declaration âtemplate<long unsigned int N> h5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&)â > 50 | dataspace(boost::array<std::size_t, N> const& dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:56:5: error: âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&)â cannot be overloaded with âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&)â > 56 | dataspace(std::vector<hsize_t> const& dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:55:5: note: previous declaration âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&)â > 55 | dataspace(std::vector<std::size_t> const& dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:62:5: error: âtemplate<long unsigned int N> h5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&, const boost::array<long unsigned int, NumDims>&)â cannot be overloaded with âtemplate<long unsigned int N> h5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&, const boost::array<long unsigned int, NumDims>&)â > 62 | dataspace(boost::array<hsize_t, N> const& dims, boost::array<hsize_t, N> const& max_dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:60:5: note: previous declaration âtemplate<long unsigned int N> h5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&, const boost::array<long unsigned int, NumDims>&)â > 60 | dataspace(boost::array<size_t, N> const& dims, boost::array<size_t, N> const& max_dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:66:5: error: âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&, const std::vector<long unsigned int>&)â cannot be overloaded with âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&, const std::vector<long unsigned int>&)â > 66 | dataspace(std::vector<hsize_t> const& dims, std::vector<hsize_t> const& max_dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:65:5: note: previous declaration âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&, const std::vector<long unsigned int>&)â > 65 | dataspace(std::vector<size_t> const& dims, std::vector<size_t> const& max_dims); > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:193:8: error: redefinition of âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&)â > 193 | inline dataspace::dataspace(std::vector<hsize_t> const& dims) > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:186:8: note: âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&)â previously defined here > 186 | inline dataspace::dataspace(std::vector<std::size_t> const& dims) > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:207:1: error: redefinition of âh5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&)â > 207 | dataspace::dataspace(boost::array<hsize_t, N> const& dims) > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:200:1: note: âh5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&)â previously declared here > 200 | dataspace::dataspace(boost::array<std::size_t, N> const& dims) > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:222:8: error: redefinition of âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&, const std::vector<long unsigned int>&)â > 222 | inline dataspace::dataspace(std::vector<hsize_t> const& dims, std::vector<hsize_t> const& max_dims) > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:214:8: note: âh5xx::dataspace::dataspace(const std::vector<long unsigned int>&, const std::vector<long unsigned int>&)â previously defined here > 214 | inline dataspace::dataspace(std::vector<size_t> const& dims, std::vector<size_t> const& max_dims) > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:238:1: error: redefinition of âh5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&, const boost::array<long unsigned int, NumDims>&)â > 238 | dataspace::dataspace(boost::array<hsize_t, N> const& dims, boost::array<hsize_t, N> const& max_dims) > | ^~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:229:1: note: âh5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&, const boost::array<long unsigned int, NumDims>&)â previously declared here > 229 | dataspace::dataspace(boost::array<size_t, N> const& dims, boost::array<size_t, N> const& max_dims) > | ^~~~~~~~~ >In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/13/include/g++-v13/string:51, > from /usr/lib/gcc/x86_64-pc-linux-gnu/13/include/g++-v13/stdexcept:39, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/electrostatics/actor.hpp:26, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/electrostatics/p3m.hpp:42, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/electrostatics/p3m.cpp:27: >In static member function âstatic _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const double; _Up = double; bool _IsMove = false]â, > inlined from â_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]â at /usr/lib/gcc/x86_64-pc-linux-gnu/13/include/g++-v13/bits/stl_algobase.h:506:30, > inlined from â_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]â at /usr/lib/gcc/x86_64-pc-linux-gnu/13/include/g++-v13/bits/stl_algobase.h:533:42, > inlined from â_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]â at /usr/lib/gcc/x86_64-pc-linux-gnu/13/include/g++-v13/bits/stl_algobase.h:540:31, > inlined from â_OI std::copy(_II, _II, _OI) [with _II = const double*; _OI = double*]â at /usr/lib/gcc/x86_64-pc-linux-gnu/13/include/g++-v13/bits/stl_algobase.h:633:7, > inlined from âOutputIterator boost::range::copy(const SinglePassRange&, OutputIterator) [with SinglePassRange = Utils::Span<const double>; OutputIterator = double*]â at /usr/include/boost/range/algorithm/copy.hpp:34:21, > inlined from âInterpolationWeights<cao> p3m_interpolation_cache::load(std::size_t) const [with int cao = 1]â at /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/p3m/interpolation.hpp:115:16, > inlined from âvoid {anonymous}::AssignForces<cao>::operator()(p3m_data_struct&, double, const ParticleRange&) const [with long unsigned int cao = 1]â at /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/electrostatics/p3m.cpp:353:51, > inlined from âstatic decltype(auto) Utils::detail::integral_parameter_impl<F, I, N>::eval(std::size_t, Args&& ...) [with Args = {p3m_data_struct&, const double&, const ParticleRange&}; F = {anonymous}::AssignForces; long unsigned int I = 1; long unsigned int N = 7]â at /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include/utils/integral_parameter.hpp:35:20, > inlined from âdecltype(auto) Utils::integral_parameter(std::size_t, Args&& ...) [with F = {anonymous}::AssignForces; long unsigned int min = 1; long unsigned int max = 7; Args = {p3m_data_struct&, const double&, const ParticleRange&}]â at /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include/utils/integral_parameter.hpp:60:60, > inlined from âdouble CoulombP3M::long_range_kernel(bool, bool, const ParticleRange&)â at /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/electrostatics/p3m.cpp:505:50: >/usr/lib/gcc/x86_64-pc-linux-gnu/13/include/g++-v13/bits/stl_algobase.h:437:30: warning: âvoid* __builtin_memcpy(void*, const void*, long unsigned int)â forming offset 32 is out of the bounds [0, 32] of object âwâ with type âconst InterpolationWeights<1>â [-Warray-bounds=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Warray-bounds=]] > 437 | __builtin_memmove(__result, __first, sizeof(_Tp) * _Num); > | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/electrostatics/p3m.cpp: In member function âdouble CoulombP3M::long_range_kernel(bool, bool, const ParticleRange&)â: >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/electrostatics/p3m.cpp:353:20: note: âwâ declared here > 353 | auto const w = p3m.inter_weights.load<cao>(p_index); > | ^ >[ 50%] Building CXX object src/core/CMakeFiles/Espresso_core.dir/nonbonded_interactions/soft_sphere.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_core_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core -I/io/writer -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/Random123-1.09/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/particle_observables/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/core/CMakeFiles/Espresso_core.dir/nonbonded_interactions/soft_sphere.cpp.o -MF CMakeFiles/Espresso_core.dir/nonbonded_interactions/soft_sphere.cpp.o.d -o CMakeFiles/Espresso_core.dir/nonbonded_interactions/soft_sphere.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/nonbonded_interactions/soft_sphere.cpp >[ 52%] Building CXX object src/core/CMakeFiles/Espresso_core.dir/nonbonded_interactions/smooth_step.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_core_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core -I/io/writer -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/Random123-1.09/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/particle_observables/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/core/CMakeFiles/Espresso_core.dir/nonbonded_interactions/smooth_step.cpp.o -MF CMakeFiles/Espresso_core.dir/nonbonded_interactions/smooth_step.cpp.o.d -o CMakeFiles/Espresso_core.dir/nonbonded_interactions/smooth_step.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/nonbonded_interactions/smooth_step.cpp >[ 52%] Building CXX object src/core/CMakeFiles/Espresso_core.dir/nonbonded_interactions/thole.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_core_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core -I/io/writer -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/Random123-1.09/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/particle_observables/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS 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-I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/Random123-1.09/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/particle_observables/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/core/CMakeFiles/Espresso_core.dir/nonbonded_interactions/wca.cpp.o -MF CMakeFiles/Espresso_core.dir/nonbonded_interactions/wca.cpp.o.d -o CMakeFiles/Espresso_core.dir/nonbonded_interactions/wca.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/nonbonded_interactions/wca.cpp >[ 52%] Building CXX object src/core/CMakeFiles/Espresso_core.dir/object-in-fluid/oif_global_forces.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_core_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core -I/io/writer -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/Random123-1.09/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/particle_observables/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/core/CMakeFiles/Espresso_core.dir/object-in-fluid/oif_global_forces.cpp.o -MF CMakeFiles/Espresso_core.dir/object-in-fluid/oif_global_forces.cpp.o.d -o CMakeFiles/Espresso_core.dir/object-in-fluid/oif_global_forces.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/object-in-fluid/oif_global_forces.cpp >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/io/writer/h5md_core.cpp: In function âvoid Writer::H5md::backup_file(const std::string&, const std::string&)â: >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/io/writer/h5md_core.cpp:60:33: warning: âbool boost::filesystem::copy_file(const path&, const path&, copy_option)â is deprecated: Use copy_options instead of copy_option [-Wdeprecated-declarations[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wdeprecated-declarations]] > 60 | boost::filesystem::copy_file( > | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ > 61 | pfrom, pto, boost::filesystem::copy_option::fail_if_exists); > | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >In file included from /usr/include/boost/filesystem.hpp:19, > from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/io/writer/h5md_core.hpp:31: >/usr/include/boost/filesystem/operations.hpp:473:13: note: declared here > 473 | inline bool copy_file(path const& from, path const& to, // See ticket #2925 > | ^~~~~~~~~ >[ 53%] Building CXX object src/core/CMakeFiles/Espresso_core.dir/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_core_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core -I/io/writer -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/Random123-1.09/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/particle_observables/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/core/CMakeFiles/Espresso_core.dir/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp.o -MF CMakeFiles/Espresso_core.dir/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp.o.d -o CMakeFiles/Espresso_core.dir/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/observables/CylindricalLBFluxDensityProfileAtParticlePositions.cpp >[ 53%] Building CXX object src/core/CMakeFiles/Espresso_core.dir/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_core_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core -I/io/writer -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/Random123-1.09/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/particle_observables/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/core/CMakeFiles/Espresso_core.dir/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp.o -MF CMakeFiles/Espresso_core.dir/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp.o.d -o CMakeFiles/Espresso_core.dir/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/observables/CylindricalLBVelocityProfileAtParticlePositions.cpp >[ 53%] Building CXX object src/core/CMakeFiles/Espresso_core.dir/observables/CylindricalLBVelocityProfile.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_core_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core -I/io/writer -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/Random123-1.09/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/particle_observables/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/core/CMakeFiles/Espresso_core.dir/observables/CylindricalLBVelocityProfile.cpp.o -MF CMakeFiles/Espresso_core.dir/observables/CylindricalLBVelocityProfile.cpp.o.d -o CMakeFiles/Espresso_core.dir/observables/CylindricalLBVelocityProfile.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/observables/CylindricalLBVelocityProfile.cpp >In file included from /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:26: >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/utility.hpp: In instantiation of âstd::vector<long unsigned int> h5xx::to_hsize_t(const boost::array<long unsigned int, NumDims>&) [with long unsigned int N = 1]â: >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:202:45: required from âh5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&) [with long unsigned int N = 1]â >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/attribute/boost_array.hpp:46:60: required from âtypename boost::enable_if<boost::mpl::and_<h5xx::is_array<T>, boost::is_fundamental<typename T::value_type> >, void>::type h5xx::write_attribute(const h5xxObject&, const std::string&, const T&) [with T = boost::array<long unsigned int, 2>; h5xxObject = group; typename boost::enable_if<boost::mpl::and_<is_array<T>, boost::is_fundamental<typename T::value_type> >, void>::type = void; typename T::value_type = long unsigned int; std::string = std::__cxx11::basic_string<char>]â >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/io/writer/h5md_core.cpp:201:24: required from here >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/utility.hpp:321:34: error: invalid conversion from âboost::array<long unsigned int, 1>::const_iteratorâ {aka âconst long unsigned int*â} to âit_tâ {aka âlong unsigned int*â} [-fpermissive[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-fpermissive]] > 321 | for (it_t it=arr_size_t.begin(); it!=arr_size_t.end(); ++it) > | ~~~~~~~~~~~~~~~~^~ > | | > | boost::array<long unsigned int, 1>::const_iterator {aka const long unsigned int*} >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/utility.hpp: In instantiation of âstd::vector<long unsigned int> h5xx::to_hsize_t(const boost::array<long unsigned int, NumDims>&) [with long unsigned int N = 3]â: >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/dataspace.hpp:202:45: required from âh5xx::dataspace::dataspace(const boost::array<long unsigned int, NumDims>&) [with long unsigned int N = 3]â >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataspace/boost_multi_array.hpp:32:12: required from âtypename boost::enable_if<h5xx::is_multi_array<T>, h5xx::dataspace>::type h5xx::create_dataspace(const T&) [with T = boost::multi_array<int, 3>; typename boost::enable_if<is_multi_array<T>, dataspace>::type = dataspace]â >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/dataset/boost_multi_array.hpp:140:54: required from âtypename boost::enable_if<h5xx::is_multi_array<T> >::type h5xx::write_dataset(dataset&, const T&, const slice&) [with T = boost::multi_array<int, 3>; typename boost::enable_if<is_multi_array<T> >::type = void]â >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/io/writer/h5md_core.cpp:85:22: required from âvoid Writer::H5md::write_dataset(const value_type&, h5xx::dataset&, const extent_type&, const extent_type&, const extent_type&) [with value_type = boost::multi_array<int, 3>; extent_type = Utils::Vector<long unsigned int, 3>]â >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/io/writer/h5md_core.cpp:471:16: required from here >/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx/h5xx/utility.hpp:321:34: error: invalid conversion from âboost::array<long unsigned int, 3>::const_iteratorâ {aka âconst long unsigned int*â} to âit_tâ {aka âlong unsigned int*â} [-fpermissive[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-fpermissive]] > 321 | for (it_t it=arr_size_t.begin(); it!=arr_size_t.end(); ++it) > | ~~~~~~~~~~~~~~~~^~ > | | > | boost::array<long unsigned int, 3>::const_iterator {aka const long unsigned int*} >[ 55%] Building CXX object src/core/CMakeFiles/Espresso_core.dir/observables/LBVelocityProfile.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_core_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core -I/io/writer -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/Random123-1.09/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/particle_observables/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/core/CMakeFiles/Espresso_core.dir/observables/LBVelocityProfile.cpp.o -MF CMakeFiles/Espresso_core.dir/observables/LBVelocityProfile.cpp.o.d -o CMakeFiles/Espresso_core.dir/observables/LBVelocityProfile.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/observables/LBVelocityProfile.cpp >[ 55%] Building CXX object src/core/CMakeFiles/Espresso_core.dir/observables/PidObservable.cpp.o >cd /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DEspresso_core_EXPORTS -DH5XX_USE_MPI -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core -I/io/writer -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/shapes/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/profiler/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/Random123-1.09/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/particle_observables/include -isystem /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/libs/h5xx -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -O3 -DNDEBUG -std=c++14 -fPIC -Wall -Wextra -Wfloat-conversion -Wno-sign-compare -Wno-unused-function -Wno-unused-parameter -Wno-clobbered -Wno-implicit-fallthrough -pedantic -Wno-cast-function-type -DBOOST_MPL_CFG_NO_PREPROCESSED_HEADERS -DBOOST_MPL_LIMIT_LIST_SIZE=30 -MD -MT src/core/CMakeFiles/Espresso_core.dir/observables/PidObservable.cpp.o -MF CMakeFiles/Espresso_core.dir/observables/PidObservable.cpp.o.d -o CMakeFiles/Espresso_core.dir/observables/PidObservable.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso/src/core/observables/PidObservable.cpp >make[2]: *** [src/core/CMakeFiles/Espresso_core.dir/build.make:1322: src/core/CMakeFiles/Espresso_core.dir/io/writer/h5md_specification.cpp.o] Error 1 >make[2]: *** Waiting for unfinished jobs.... >make[2]: *** [src/core/CMakeFiles/Espresso_core.dir/build.make:1308: src/core/CMakeFiles/Espresso_core.dir/io/writer/h5md_core.cpp.o] Error 1 >make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >make[1]: *** [CMakeFiles/Makefile2:2801: src/core/CMakeFiles/Espresso_core.dir/all] Error 2 >make[1]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' >make: *** [Makefile:136: all] Error 2 > * ERROR: sci-physics/espresso-4.2.0::gentoo failed (compile phase): > * emake failed > * > * If you need support, post the output of `emerge --info '=sci-physics/espresso-4.2.0::gentoo'`, > * the complete build log and the output of `emerge -pqv '=sci-physics/espresso-4.2.0::gentoo'`. > * The complete build log is located at '/var/log/emerge-log/build/sci-physics/espresso-4.2.0:20240316-123505.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-physics/espresso-4.2.0/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/sci-physics/espresso-4.2.0/temp/environment'. > * Working directory: '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso-4.2.0_build' > * S: '/var/tmp/portage/sci-physics/espresso-4.2.0/work/espresso' >
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