sci-mathematics:gretl-2021d:20221127-103409.log

sci-mathematics:gretl-2021d:20221127-103409.log (text/plain), 18.68 KB, created by Toralf Förster on 2022-11-27 10:40:19 UTC

 * Package:    sci-mathematics/gretl-2021d:0/40
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        abi_x86_64 amd64 cpu_flags_x86_avx cpu_flags_x86_sse2 elibc_glibc kernel_linux nls openmp readline userland_GNU
 * FEATURES:   network-sandbox preserve-libs sandbox userpriv usersandbox

>>> Unpacking source...
>>> Unpacking gretl-2021d.tar.xz to /var/tmp/portage/sci-mathematics/gretl-2021d/work
>>> Source unpacked in /var/tmp/portage/sci-mathematics/gretl-2021d/work
>>> Preparing source in /var/tmp/portage/sci-mathematics/gretl-2021d/work/gretl-2021d ...
 * Applying gretl-2001d-appdatadir.patch ...
 [ ok ]
>>> Source prepared.
 * Clang 16 testing: this build is using a /etc/portage/bashrc hook (2022-11-24T21:47)!
 * Clang 16 testing: see https://wiki.gentoo.org/wiki/Modern_C_porting for more info.
>>> Configuring source in /var/tmp/portage/sci-mathematics/gretl-2021d/work/gretl-2021d ...
 * econf: updating gretl-2021d/tools/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating gretl-2021d/tools/config.guess with /usr/share/gnuconfig/config.guess
./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --datarootdir=/usr/share --disable-static --docdir=/usr/share/doc/gretl-2021d --htmldir=/usr/share/doc/gretl-2021d/html --with-sysroot=/ --libdir=/usr/lib64 --disable-rpath --enable-avx --disable-build-addons --disable-gui --disable-xdg --disable-xdg-utils --enable-nls --enable-openmp --enable-sse2 --without-gsf --without-mpi --without-odbc --with-readline --without-libR LAPACK_LIBS=-llapack 
configuring for gretl 2021d (library version 40.0.0)
checking for x86_64-pc-linux-gnu-gcc... clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang accepts -g... yes
checking for clang option to accept ISO C89... none needed
checking how to run the C preprocessor... clang -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking libintl.h usability... yes
checking libintl.h presence... yes
checking for libintl.h... yes
checking whether make sets $(MAKE)... yes
checking for a BSD-compatible install... /usr/lib/portage/python3.10/ebuild-helpers/xattr/install -c
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for a sed that does not truncate output... /bin/sed
checking whether NLS is requested... yes
checking for msgfmt... /usr/bin/msgfmt
checking for gmsgfmt... /usr/bin/gmsgfmt
checking for xgettext... /usr/bin/xgettext
checking for msgmerge... /usr/bin/msgmerge
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking for ld used by clang... /usr/lib/llvm/15/bin/x86_64-pc-linux-gnu-ld
checking if the linker (/usr/lib/llvm/15/bin/x86_64-pc-linux-gnu-ld) is GNU ld... yes
checking for shared library run path origin... done
checking 32-bit host C ABI... no
checking for ELF binary format... yes
checking for the common suffixes of directories in the library search path... lib,lib,lib64
checking for CFPreferencesCopyAppValue... no
checking for CFLocaleCopyPreferredLanguages... no
checking for GNU gettext in libc... yes
checking whether to use NLS... yes
checking where the gettext function comes from... libc
checking for x86_64-pc-linux-gnu-gcc... (cached) clang
checking whether we are using the GNU C compiler... (cached) yes
checking whether clang accepts -g... (cached) yes
checking for clang option to accept ISO C89... (cached) none needed
checking how to print strings... printf
checking for a sed that does not truncate output... (cached) /bin/sed
checking for fgrep... /bin/grep -F
checking for ld used by clang... /usr/lib/llvm/15/bin/x86_64-pc-linux-gnu-ld
checking if the linker (/usr/lib/llvm/15/bin/x86_64-pc-linux-gnu-ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-pc-linux-gnu-nm -B
checking the name lister (/usr/bin/x86_64-pc-linux-gnu-nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/lib/llvm/15/bin/x86_64-pc-linux-gnu-ld option to reload object files... -r
checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-pc-linux-gnu-dlltool... x86_64-pc-linux-gnu-dlltool
checking how to associate runtime and link libraries... printf %s\n
checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar
checking for archiver @FILE support... @
checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip
checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
checking for gawk... gawk
checking command to parse /usr/bin/x86_64-pc-linux-gnu-nm -B output from clang object... ok
checking for sysroot... /
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for x86_64-pc-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if clang supports -fno-rtti -fno-exceptions... yes
checking for clang option to produce PIC... -fPIC -DPIC
checking if clang PIC flag -fPIC -DPIC works... yes
checking if clang static flag -static works... yes
checking if clang supports -c -o file.o... yes
checking if clang supports -c -o file.o... (cached) yes
checking whether the clang linker (/usr/lib/llvm/15/bin/x86_64-pc-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for shl_load... no
checking for shl_load in -ldld... no
checking for dlopen... yes
checking whether a program can dlopen itself... yes
checking whether a statically linked program can dlopen itself... no
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking whether ln -s works... yes
checking for grep that handles long lines and -e... (cached) /bin/grep
checking for sin in -lm... yes
checking for fopen in -lc... yes
checking for sys/wait.h that is POSIX.1 compatible... yes
checking for stdint.h... (cached) yes
checking for unistd.h... (cached) yes
checking dirent.h usability... yes
checking dirent.h presence... yes
checking for dirent.h... yes
checking fnmatch.h usability... yes
checking fnmatch.h presence... yes
checking for fnmatch.h... yes
checking fenv.h usability... yes
checking fenv.h presence... yes
checking for fenv.h... yes
checking byteswap.h usability... yes
checking byteswap.h presence... yes
checking for byteswap.h... yes
checking sys/times.h usability... yes
checking sys/times.h presence... yes
checking for sys/times.h... yes
checking libproc.h usability... no
checking libproc.h presence... no
checking for libproc.h... no
checking sys/proc_info.h usability... no
checking sys/proc_info.h presence... no
checking for sys/proc_info.h... no
checking for an ANSI C-conforming const... yes
checking for vasprintf... yes
checking for posix_memalign... yes
checking size of int... 4
checking whether byte ordering is bigendian... no
checking whether to use SSE2... yes
checking whether to use AVX... yes
checking whether to use OpenMP... yes
checking immintrin.h usability... yes
checking immintrin.h presence... yes
checking for immintrin.h... yes
checking readline/readline.h usability... yes
checking readline/readline.h presence... yes
checking for readline/readline.h... yes
checking for tgetent in -lncurses... no
checking for tgetent in -ltermcap... no
checking for tgetent in -lcurses... no
checking for readline in -lreadline... yes
checking for rl_completion_matches in -lreadline... yes
checking whether rl_done is declared... yes
checking whether we are using the GNU C++ compiler... yes
checking whether clang++ accepts -g... yes
checking how to run the C++ preprocessor... clang++ -E
checking for ld used by clang++... /usr/lib/llvm/15/bin/x86_64-pc-linux-gnu-ld -m elf_x86_64
checking if the linker (/usr/lib/llvm/15/bin/x86_64-pc-linux-gnu-ld -m elf_x86_64) is GNU ld... yes
checking whether the clang++ linker (/usr/lib/llvm/15/bin/x86_64-pc-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes
checking for clang++ option to produce PIC... -fPIC -DPIC
checking if clang++ PIC flag -fPIC -DPIC works... yes
checking if clang++ static flag -static works... yes
checking if clang++ supports -c -o file.o... yes
checking if clang++ supports -c -o file.o... (cached) yes
checking whether the clang++ linker (/usr/lib/llvm/15/bin/x86_64-pc-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for gzopen in -lz... yes
checking for GMP - version >= 4.0.1... yes
checking for MPFR - version >= 2.2.0... yes
checking for lapack... yes
checking for mmap... yes
checking for gnuplot... yes
checking for pdflatex... yes
checking for pkg-config... /usr/bin/pkg-config
checking for x86_64-pc-linux-gnu-pkg-config... (cached) /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for FFTW... yes
checking for CURL... yes
checking for GLIB... yes
checking for JSON_GLIB... yes
checking for XML... yes
checking whether CC supports -Wno-deprecated-declarations... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating gretl_sh
config.status: creating gretl.pc
config.status: creating gui/Makefile
config.status: creating gui/debug
config.status: creating xdg/gretl.desktop
config.status: creating xdg/Makefile
config.status: creating cli/Makefile
config.status: creating cli/debug
config.status: creating lib/Makefile
config.status: creating plugin/Makefile
config.status: creating po/Makefile.in
config.status: creating share/Makefile
config.status: creating share/bcih/Makefile
config.status: creating tests/Makefile
config.status: creating apidemo/Makefile
config.status: creating redhat/gretl.spec
config.status: creating utils/emacs/Makefile
config.status: creating doc/gretl.sty
config.status: creating doc/gretl-lite.sty
config.status: creating config.h
config.status: executing po-directories commands
config.status: creating po/POTFILES
config.status: creating po/Makefile
config.status: executing libtool commands

Configuration:

  Installation path:                      /usr
  Use readline library:                   yes
  Use gnuplot for graphs:                 yes
  Use pdflatex for typesetting:           yes
  Use libgsf for zip/unzip:               no
  SIMD support for RNG:                   yes
  OpenMP support:                         yes
  MPI support:                            no
  AVX support for arithmetic:             yes
  Build with GTK version:                 none
  Use gtksourceview version:              no
  Build gretl documentation:              no
  Use Lucida fonts:                       no
  Build message catalogs:                 yes
  Build gretl addons:                     no
  X-12-ARIMA support:                     yes
  TRAMO/SEATS support:                    yes
  libR support:                           no
  ODBC support:                           no
  GMP support:                            yes
  JSON parsing support:                   yes
  Use xdg-utils in installation:          no

  LAPACK libraries:
    -llapack 

Now type 'make' to build gretl.

>>> Source configured.
'/var/tmp/portage/sci-mathematics/gretl-2021d/temp/clang16-errors.log' -> '/var/tmp/clang/sci-mathematics/gretl-2021d/clang16-errors.log'
'/var/tmp/portage/sci-mathematics/gretl-2021d/temp/clang16-safe.log' -> '/var/tmp/clang/sci-mathematics/gretl-2021d/clang16-safe.log'
>>> Compiling source in /var/tmp/portage/sci-mathematics/gretl-2021d/work/gretl-2021d ...
make -j4 
clang -o builddate builddate.c
make -C po
make[1]: Entering directory '/var/tmp/portage/sci-mathematics/gretl-2021d/work/gretl-2021d/po'
make[1]: Nothing to be done for 'all'.
make[1]: Leaving directory '/var/tmp/portage/sci-mathematics/gretl-2021d/work/gretl-2021d/po'
./builddate
Updating build.h
make -C lib
make[1]: Entering directory '/var/tmp/portage/sci-mathematics/gretl-2021d/work/gretl-2021d/lib'
../libtool --mode=compile clang -mavx -Winline -fopenmp=libomp -c -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -I.. -I.. -I../lib/src -I/usr/include/libxml2  -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include        -DHAVE_CONFIG_H -DLIBDIR=\"/usr/lib64\"    -o gretl_model.lo ../lib/src/gretl_model.c
../libtool --mode=compile clang -mavx -Winline -fopenmp=libomp -c -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -I.. -I.. -I../lib/src -I/usr/include/libxml2  -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include        -DHAVE_CONFIG_H -DLIBDIR=\"/usr/lib64\"    -o pdtr.lo ../cephes/pdtr.c
../libtool --mode=compile clang -mavx -Winline -fopenmp=libomp -c -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -I.. -I.. -I../lib/src -I/usr/include/libxml2  -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include        -DHAVE_CONFIG_H -DLIBDIR=\"/usr/lib64\"    -o matrix_extra.lo ../lib/src/matrix_extra.c
../libtool --mode=compile clang -mavx -Winline -fopenmp=libomp -c -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -I.. -I.. -I../lib/src -I/usr/include/libxml2  -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include        -DHAVE_CONFIG_H -DLIBDIR=\"/usr/lib64\"    -o pvalues.lo ../lib/src/pvalues.c
libtool: compile:  clang -mavx -Winline -fopenmp=libomp -c -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -I.. -I.. -I../lib/src -I/usr/include/libxml2 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DHAVE_CONFIG_H -DLIBDIR=\"/usr/lib64\" ../lib/src/matrix_extra.c  -fPIC -DPIC -o .libs/matrix_extra.o
libtool: compile:  clang -mavx -Winline -fopenmp=libomp -c -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -I.. -I.. -I../lib/src -I/usr/include/libxml2 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DHAVE_CONFIG_H -DLIBDIR=\"/usr/lib64\" ../cephes/pdtr.c  -fPIC -DPIC -o .libs/pdtr.o
libtool: compile:  clang -mavx -Winline -fopenmp=libomp -c -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -I.. -I.. -I../lib/src -I/usr/include/libxml2 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DHAVE_CONFIG_H -DLIBDIR=\"/usr/lib64\" ../lib/src/pvalues.c  -fPIC -DPIC -o .libs/pvalues.o
libtool: compile:  clang -mavx -Winline -fopenmp=libomp -c -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -I.. -I.. -I../lib/src -I/usr/include/libxml2 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DHAVE_CONFIG_H -DLIBDIR=\"/usr/lib64\" ../lib/src/gretl_model.c  -fPIC -DPIC -o .libs/gretl_model.o
clang -mavx -Winline -fopenmp=libomp -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -I.. -I.. -I../lib/src -I/usr/include/libxml2  -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include        -DHAVE_CONFIG_H -DLIBDIR=\"/usr/lib64\"   -MM -MT pdtr.lo ../cephes/pdtr.c > .deps/pdtr.d
/bin/sh: line 1: .deps/pdtr.d: No such file or directory
make[1]: *** [Makefile:316: pdtr.lo] Error 1 shuffle=2153905176
make[1]: *** Waiting for unfinished jobs....
clang -mavx -Winline -fopenmp=libomp -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -I.. -I.. -I../lib/src -I/usr/include/libxml2  -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include        -DHAVE_CONFIG_H -DLIBDIR=\"/usr/lib64\"   -MM -MT pvalues.lo ../lib/src/pvalues.c > .deps/pvalues.d
/bin/sh: line 1: .deps/pvalues.d: No such file or directory
make[1]: *** [Makefile:316: pvalues.lo] Error 1 shuffle=2153905176
clang -mavx -Winline -fopenmp=libomp -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -I.. -I.. -I../lib/src -I/usr/include/libxml2  -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include        -DHAVE_CONFIG_H -DLIBDIR=\"/usr/lib64\"   -MM -MT matrix_extra.lo ../lib/src/matrix_extra.c > .deps/matrix_extra.d
/bin/sh: line 1: .deps/matrix_extra.d: No such file or directory
make[1]: *** [Makefile:316: matrix_extra.lo] Error 1 shuffle=2153905176
clang -mavx -Winline -fopenmp=libomp -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -I.. -I.. -I../lib/src -I/usr/include/libxml2  -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include        -DHAVE_CONFIG_H -DLIBDIR=\"/usr/lib64\"   -MM -MT gretl_model.lo ../lib/src/gretl_model.c > .deps/gretl_model.d
/bin/sh: line 1: .deps/gretl_model.d: No such file or directory
make[1]: *** [Makefile:316: gretl_model.lo] Error 1 shuffle=2153905176
make[1]: Leaving directory '/var/tmp/portage/sci-mathematics/gretl-2021d/work/gretl-2021d/lib'
make: *** [Makefile:69: lib] Error 2 shuffle=2153905176
 * ERROR: sci-mathematics/gretl-2021d::gentoo failed (compile phase):
 *   emake failed
 * 
 * If you need support, post the output of `emerge --info '=sci-mathematics/gretl-2021d::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-mathematics/gretl-2021d::gentoo'`.
 * The complete build log is located at '/var/log/portage/sci-mathematics:gretl-2021d:20221127-103409.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-mathematics/gretl-2021d/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-mathematics/gretl-2021d/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-mathematics/gretl-2021d/work/gretl-2021d'
 * S: '/var/tmp/portage/sci-mathematics/gretl-2021d/work/gretl-2021d'