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Gentoo's Bugzilla – Attachment 835845 Details for
Bug 882483
sci-physics/root-6.26.08 - -- Configuring incomplete, errors occurred!
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sci-physics:root-6.26.08:20221122-055558.log
sci-physics:root-6.26.08:20221122-055558.log (text/plain), 11.03 KB, created by
Toralf Förster
on 2022-11-22 09:12:44 UTC
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Description:
sci-physics:root-6.26.08:20221122-055558.log
Filename:
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Creator:
Toralf Förster
Created:
2022-11-22 09:12:44 UTC
Size:
11.03 KB
patch
obsolete
> * Package: sci-physics/root-6.26.08:6.26/08 > * Repository: gentoo > * Maintainer: amadio@gentoo.org sci-physics@gentoo.org > * USE: X abi_x86_64 amd64 asimage c++17 davix elibc_glibc examples fortran gdml gsl kernel_linux minuit opengl python_single_target_python3_10 roofit root7 ssl tbb tmva unuran userland_GNU xml > * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox > * Using following Fortran compiler: > * F77: x86_64-pc-linux-gnu-gfortran > * FC: x86_64-pc-linux-gnu-gfortran > * There are extra options on packages not available in Gentoo. > * You can use the environment variable EXTRA_ECONF to enable > * these packages. For example, for Vdt you would set: > * EXTRA_ECONF="-Dbuiltin_vdt=ON -Dvdt=ON" >>>> Unpacking source... >>>> Unpacking root_v6.26.08.source.tar.gz to /var/tmp/portage/sci-physics/root-6.26.08/work >>>> Source unpacked in /var/tmp/portage/sci-physics/root-6.26.08/work >>>> Preparing source in /var/tmp/portage/sci-physics/root-6.26.08/work/root-6.26.08 ... > * Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-physics/root-6.26.08/work/root-6.26.08" > * Build directory (BUILD_DIR): "/var/tmp/portage/sci-physics/root-6.26.08/work/root-6.26.08_build" > * Applying root-6.12.06_cling-runtime-sysroot.patch ... > [ ok ] > * Hardcoded definition(s) removed in interpreter/CMakeLists.txt: > * set(CMAKE_BUILD_TYPE ${LLVM_BUILD_TYPE}) > * Hardcoded definition(s) removed in interpreter/llvm/src/CMakeLists.txt: > * set(CMAKE_BUILD_TYPE "Debug" CACHE STRING "Build type (default Debug)" FORC >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-physics/root-6.26.08/work/root-6.26.08 ... > * Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-physics/root-6.26.08/work/root-6.26.08" > * Build directory (BUILD_DIR): "/var/tmp/portage/sci-physics/root-6.26.08/work/root-6.26.08_build" >cmake -C /var/tmp/portage/sci-physics/root-6.26.08/work/root-6.26.08_build/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_C_COMPILER=x86_64-pc-linux-gnu-gcc -DCMAKE_CXX_COMPILER=x86_64-pc-linux-gnu-g++ -DLLVM_BUILD_TYPE=Release -DCMAKE_BUILD_TYPE=Release -DCMAKE_CUDA_HOST_COMPILER=x86_64-pc-linux-gnu-g++ -DCMAKE_C_FLAGS=-pipe -march=native -fno-diagnostics-color -O2 -DCMAKE_CXX_FLAGS=-pipe -march=native -fno-diagnostics-color -O2 -DCMAKE_CXX_STANDARD=17 -DPYTHON_EXECUTABLE=/usr/bin/ -DCMAKE_INSTALL_PREFIX=/usr/lib/root/6.26 -DCMAKE_INSTALL_MANDIR=/usr/lib/root/6.26/share/man -DCMAKE_INSTALL_LIBDIR=lib -DDEFAULT_SYSROOT= -DCLING_BUILD_PLUGINS=OFF -Dasserts=OFF -Ddev=OFF -Dexceptions=ON -Dfail-on-missing=ON -Dgnuinstall=OFF -Dshared=ON -Dsoversion=ON -Dbuiltin_llvm=ON -Dbuiltin_clang=ON -Dbuiltin_cling=ON -Dbuiltin_openui5=ON -Dbuiltin_afterimage=OFF -Dbuiltin_cfitsio=OFF -Dbuiltin_cppzmq=OFF -Dbuiltin_davix=OFF -Dbuiltin_fftw3=OFF -Dbuiltin_freetype=OFF -Dbuiltin_ftgl=OFF -Dbuiltin_gl2ps=OFF -Dbuiltin_glew=OFF -Dbuiltin_gsl=OFF -Dbuiltin_lz4=OFF -Dbuiltin_lzma=OFF -Dbuiltin_nlohmannjson=OFF -Dbuiltin_openssl=OFF -Dbuiltin_pcre=OFF -Dbuiltin_tbb=OFF -Dbuiltin_unuran=OFF -Dbuiltin_vc=OFF -Dbuiltin_vdt=OFF -Dbuiltin_veccore=OFF -Dbuiltin_xrootd=OFF -Dbuiltin_xxhash=OFF -Dbuiltin_zeromq=OFF -Dbuiltin_zlib=OFF -Dbuiltin_zstd=OFF -Dalien=OFF -Darrow=OFF -Dasimage=yes -Dccache=OFF -Dcefweb=OFF -Dclad=OFF -Dcocoa=no -Dcuda=no -Dcudnn=no -Dcxxmodules=OFF -Ddataframe=ON -Ddavix=yes -Ddcache=OFF -Ddistcc=OFF -Dfcgi=no -Dfftw3=no -Dfitsio=no -Dfortran=yes -Dgdml=yes -Dgfal=OFF -Dgminimal=OFF -Dgsl_shared=yes -Dgviz=no -Dhttp=no -Dimt=yes -Dlibcxx=no -Dmathmore=yes -Dminimal=OFF -Dminuit2=yes -Dminuit=yes -Dmlp=yes -Dmonalisa=OFF -Dmpi=no -Dmysql=no -Dodbc=no -Dopengl=yes -Doracle=no -Dpgsql=no -Dpyroot=no -Dpyroot_legacy=OFF -Dpythia6=no -Dpythia8=no -Dqt5web=no -Dqt6web=OFF -Dr=no -Droofit=yes -Droofit_multiprocess=OFF -Droot7=yes -Drootbench=OFF -Droottest=OFF -Drpath=OFF -Druntime_cxxmodules=OFF -Dshadowpw=no -Dspectrum=ON -Dsqlite=no -Dssl=yes -Dtcmalloc=OFF -Dtest_distrdf_dask=OFF -Dtest_distrdf_pyspark=OFF -Dtesting=no -Dtmva=yes -Dtmva-cpu=yes -Dtmva-gpu=no -Dtmva-pymva=yes -Dtmva-rmva=no -Dtmva-sofie=OFF -Dunuran=yes -During=no -Dvc=no -Dvdt=OFF -Dveccore=OFF -Dvecgeom=OFF -Dx11=yes -Dxml=yes -Dxrootd=no -DCMAKE_BUILD_TYPE=RelWithDebInfo -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-physics/root-6.26.08/work/root-6.26.08_build/gentoo_toolchain.cmake /var/tmp/portage/sci-physics/root-6.26.08/work/root-6.26.08 >loading initial cache file /var/tmp/portage/sci-physics/root-6.26.08/work/root-6.26.08_build/gentoo_common_config.cmake >-- The C compiler identification is GNU 12.2.1 >-- The CXX compiler identification is GNU 12.2.1 >-- Detecting C compiler ABI info >-- Detecting C compiler ABI info - done >-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc - skipped >-- Detecting C compile features >-- Detecting C compile features - done >-- Detecting CXX compiler ABI info >-- Detecting CXX compiler ABI info - done >-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++ - skipped >-- Detecting CXX compile features >-- Detecting CXX compile features - done >-- Found Git: /usr/bin/git (found version "2.38.1") >-- Checking internet connectivity... >-- No: will not automatically download external dependencies >-- Looking for Python >-- Could NOT find Python (missing: Python_INCLUDE_DIRS Python_LIBRARIES Python_NumPy_INCLUDE_DIRS Interpreter Development NumPy Development.Module Development.Embed) >CMake Warning at cmake/modules/SearchRootCoreDeps.cmake:115 (message): > No supported Python development package was found for the specified Python > executable; PyROOT will not be built >Call Stack (most recent call first): > CMakeLists.txt:155 (include) > > >-- The Fortran compiler identification is GNU 12.2.1 >-- Detecting Fortran compiler ABI info >-- Detecting Fortran compiler ABI info - done >-- Check for working Fortran compiler: /usr/bin/x86_64-pc-linux-gnu-gfortran - skipped >-- Found GCC. Major version 12, minor version 2 >-- Performing Test CMAKE_HAVE_LIBC_PTHREAD >-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success >-- Found Threads: TRUE >-- Performing Test GLIBCXX_USE_CXX11_ABI >-- Performing Test GLIBCXX_USE_CXX11_ABI - Success >-- ROOT Platform: linux >-- ROOT Compiler: GNU 12.2.1 >-- ROOT Processor: x86_64 >-- ROOT Architecture: linuxx8664gcc >-- Build Type: 'RelWithDebInfo' (flags = '') >-- Compiler Flags: -pipe -march=native -fno-diagnostics-color -O2 -std=c++17 -Wno-implicit-fallthrough -Wno-noexcept-type -pipe -Wshadow -Wall -W -Woverloaded-virtual -fsigned-char -pthread >-- ROOT default compression algorithm: zlib >-- PyROOT will be built for version >-- Looking for ZLib >-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.13") >-- Looking for nlohmann/json.hpp >-- Found nlohmann_json: /usr/share/cmake/nlohmann_json/nlohmann_jsonConfig.cmake (found suitable version "3.11.2", minimum required is "3.9") >-- Looking for Unuran >-- Found Unuran: /usr/lib64/libunuran.so >-- Looking for Freetype >-- Found Freetype: /usr/lib64/libfreetype.so (found version "2.12.1") >-- Looking for PCRE >-- Found PCRE: /usr/include (found version "8.45") >-- Looking for LZMA >-- Looking for lzma_auto_decoder in /usr/lib64/liblzma.so >-- Looking for lzma_auto_decoder in /usr/lib64/liblzma.so - found >-- Looking for lzma_easy_encoder in /usr/lib64/liblzma.so >-- Looking for lzma_easy_encoder in /usr/lib64/liblzma.so - found >-- Looking for lzma_lzma_preset in /usr/lib64/liblzma.so >-- Looking for lzma_lzma_preset in /usr/lib64/liblzma.so - found >-- Found LibLZMA: /usr/lib64/liblzma.so (found version "5.2.8") >-- Looking for xxHash >-- Found xxHash: /usr/lib64/libxxhash.so (found version "0.8.1") >-- Looking for ZSTD >-- Found ZSTD: /usr/lib64/libzstd.so >-- Looking for LZ4 >-- Found LZ4: /usr/lib64/liblz4.so (found version "1.9.4") >-- Looking for X11 >-- Found X11: /usr/include >-- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so >-- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so - found >-- Looking for gethostbyname >-- Looking for gethostbyname - found >-- Looking for connect >-- Looking for connect - found >-- Looking for remove >-- Looking for remove - found >-- Looking for shmat >-- Looking for shmat - found >-- Looking for IceConnectionNumber in ICE >-- Looking for IceConnectionNumber in ICE - found >-- X11_INCLUDE_DIR: /usr/include >-- X11_LIBRARIES: /usr/lib64/libSM.so;/usr/lib64/libICE.so;/usr/lib64/libX11.so;/usr/lib64/libXext.so >-- X11_Xpm_INCLUDE_PATH: /usr/include >-- X11_Xpm_LIB: /usr/lib64/libXpm.so >-- X11_Xft_INCLUDE_PATH: /usr/include >-- X11_Xft_LIB: /usr/lib64/libXft.so >-- X11_Xext_INCLUDE_PATH: /usr/include >-- X11_Xext_LIB: /usr/lib64/libXext.so >-- Found GIF: /usr/lib64/libgif.so (found version "5.2.1") >-- Found TIFF: /usr/lib64/libtiff.so (found version "4.4.0") >-- Found PNG: /usr/lib64/libpng.so (found version "1.6.39") >-- Found JPEG: /usr/lib64/libjpeg.so (found version "62") >-- Looking for AfterImage >-- Found AfterImage: /usr/include/libAfterImage (found version "1.20") >-- Looking for GSL >-- Found GSL: /usr/include (found suitable version "2.7.1", minimum required is "1.10") >-- Looking for OpenGL >-- Found OpenGL: /usr/lib64/libOpenGL.so >-- Looking for GLEW >-- Found GLEW: /usr/include (found version "2.2.0") >-- Looking for gl2ps >-- Found gl2ps: /usr/lib64/libgl2ps.so >-- Looking for LibXml2 >-- Found LibXml2: /usr/lib64/libxml2.so (found version "2.10.3") >-- Found OpenSSL: /usr/lib64/libcrypto.so (found version "3.0.7") >-- Found FTGL: /usr/include >-- Found PkgConfig: /usr/bin/x86_64-pc-linux-gnu-pkg-config (found version "1.8.0") >-- Checking for module 'davix>=0.6.4' >-- Found davix, version 0.8.3 >-- Looking for TBB >-- Found TBB: /usr (Required is at least version "2018") >-- Looking for BLAS for optional parts of TMVA >CMake Error at cmake/modules/SearchInstalledSoftware.cmake:1804 (message): > TMVA: numpy python package or Python development package not found and > tmva-pymva component required (python executable: /usr/bin/) >Call Stack (most recent call first): > CMakeLists.txt:245 (include) > > >-- Configuring incomplete, errors occurred! >See also "/var/tmp/portage/sci-physics/root-6.26.08/work/root-6.26.08_build/CMakeFiles/CMakeOutput.log". > * ERROR: sci-physics/root-6.26.08::gentoo failed (configure phase): > * cmake failed > * > * Call stack: > * ebuild.sh, line 122: Called src_configure > * environment, line 3833: Called cmake_src_configure > * environment, line 1964: Called die > * The specific snippet of code: > * "${CMAKE_BINARY}" "${cmakeargs[@]}" "${CMAKE_USE_DIR}" || die "cmake failed"; > * > * If you need support, post the output of `emerge --info '=sci-physics/root-6.26.08::gentoo'`, > * the complete build log and the output of `emerge -pqv '=sci-physics/root-6.26.08::gentoo'`. > * The complete build log is located at '/var/log/portage/sci-physics:root-6.26.08:20221122-055558.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-physics/root-6.26.08/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/sci-physics/root-6.26.08/temp/environment'. > * Working directory: '/var/tmp/portage/sci-physics/root-6.26.08/work/root-6.26.08_build' > * S: '/var/tmp/portage/sci-physics/root-6.26.08/work/root-6.26.08' >
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