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Gentoo's Bugzilla – Attachment 791558 Details for
Bug 858209
www-client/surf-2.1-r1 - file collision with sci-chemistry/molden-6.9
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www-client:surf-2.1-r1:20220715-074814.log
www-client:surf-2.1-r1:20220715-074814.log (text/plain), 17.01 KB, created by
Toralf Förster
on 2022-07-15 14:26:11 UTC
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Description:
www-client:surf-2.1-r1:20220715-074814.log
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Creator:
Toralf Förster
Created:
2022-07-15 14:26:11 UTC
Size:
17.01 KB
patch
obsolete
> * Package: www-client/surf-2.1-r1 > * Repository: gentoo > * Maintainer: arkamar@atlas.cz proxy-maint@gentoo.org > * USE: abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU > * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox > * The default config.h assumes you have > * net-misc/curl > * x11-terms/st > * installed to support the download function. > * Without those, downloads will fail (gracefully). > * You can fix this by: > * 1) Installing these packages, or > * 2) Setting USE=savedconfig and changing config.h accordingly. >>>> Unpacking source... >>>> Unpacking surf-2.1.tar.gz to /var/tmp/portage/www-client/surf-2.1-r1/work >>>> Source unpacked in /var/tmp/portage/www-client/surf-2.1-r1/work >>>> Preparing source in /var/tmp/portage/www-client/surf-2.1-r1/work/surf-2.1 ... > * Applying surf-2.1-gentoo.patch ... > [ ok ] >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/www-client/surf-2.1-r1/work/surf-2.1 ... >>>> Source configured. >>>> Compiling source in /var/tmp/portage/www-client/surf-2.1-r1/work/surf-2.1 ... >make -j4 >cp config.def.h config.h >surf build options: >CC = x86_64-pc-linux-gnu-gcc >CFLAGS = -fPIC -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/lib64/libffi/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/gio-unix-2.0 -I/usr/include/sysprof-3 -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/dbus-1.0 -I/usr/lib64/dbus-1.0/include -I/usr/include/at-spi-2.0 -I/usr/include/gcr-3 -I/usr/include/gck-1 -I/usr/include/p11-kit-1 -I/usr/include/webkitgtk-4.0 -I/usr/include/libsoup-2.4 -I/usr/include/libxml2 -pthread -DVERSION="2.1" -DGCR_API_SUBJECT_TO_CHANGE -DLIBPREFIX="/usr/lib" -DWEBEXTDIR="/usr/lib/surf" -D_DEFAULT_SOURCE -pipe -march=native -fno-diagnostics-color -O2 >x86_64-pc-linux-gnu-gcc -fPIC -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/lib64/libffi/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/gio-unix-2.0 -I/usr/include/sysprof-3 -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/dbus-1.0 -I/usr/lib64/dbus-1.0/include -I/usr/include/at-spi-2.0 -I/usr/include/gcr-3 -I/usr/include/gck-1 -I/usr/include/p11-kit-1 -I/usr/include/webkitgtk-4.0 -I/usr/include/libsoup-2.4 -I/usr/include/libxml2 -pthread -DVERSION=\"2.1\" -DGCR_API_SUBJECT_TO_CHANGE -DLIBPREFIX=\"/usr/lib\" -DWEBEXTDIR=\"/usr/lib/surf\" -D_DEFAULT_SOURCE -pipe -march=native -fno-diagnostics-color -O2 -c surf.c >WEBEXTCFLAGS = -fPIC -I/usr/include/webkitgtk-4.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/lib64/libffi/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/gio-unix-2.0 -I/usr/include/sysprof-3 -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/dbus-1.0 -I/usr/lib64/dbus-1.0/include -I/usr/include/at-spi-2.0 -I/usr/include/libsoup-2.4 -I/usr/include/libxml2 -pthread -pipe -march=native -fno-diagnostics-color -O2 >x86_64-pc-linux-gnu-gcc -fPIC -I/usr/include/webkitgtk-4.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/lib64/libffi/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/gio-unix-2.0 -I/usr/include/sysprof-3 -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/dbus-1.0 -I/usr/lib64/dbus-1.0/include -I/usr/include/at-spi-2.0 -I/usr/include/libsoup-2.4 -I/usr/include/libxml2 -pthread -pipe -march=native -fno-diagnostics-color -O2 -c webext-surf.c >LDFLAGS = -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 >webext-surf.c: In function âmsgsurfâ: >webext-surf.c:28:49: warning: format â%câ expects argument of type âintâ, but argument 4 has type âguint64â {aka âlong unsigned intâ} [-Wformat=] > 28 | if ((ret = snprintf(msg, sizeof(msg), "%c%s", pageid, s)) > | ~^ ~~~~~~ > | | | > | int guint64 {aka long unsigned int} > | %ld >webext-surf.c: In function âreadsockâ: >webext-surf.c:58:72: warning: format â%dâ expects argument of type âintâ, but argument 3 has type âgsizeâ {aka âlong unsigned intâ} [-Wformat=] > 58 | fprintf(stderr, "webext: readsock: message too short: %d\n", > | ~^ > | | > | int > | %ld > 59 | msgsz); > | ~~~~~ > | | > | gsize {aka long unsigned int} > >webext-surf.c: In function âwebkit_web_extension_initialize_with_user_dataâ: >webext-surf.c:98:23: warning: passing argument 1 of âg_variant_getâ discards âconstâ qualifier from pointer target type [-Wdiscarded-qualifiers] > 98 | g_variant_get(gv, "i", &sock); > | ^~ >In file included from /usr/include/glib-2.0/glib/gmessages.h:36, > from /usr/include/glib-2.0/glib.h:62, > from /usr/include/glib-2.0/gobject/gbinding.h:28, > from /usr/include/glib-2.0/glib-object.h:22, > from /usr/include/glib-2.0/gio/gioenums.h:28, > from /usr/include/glib-2.0/gio/giotypes.h:28, > from /usr/include/glib-2.0/gio/gio.h:26, > from webext-surf.c:9: >/usr/include/glib-2.0/glib/gvariant.h:408:96: note: expected âGVariant *â {aka âstruct _GVariant *â} but argument is of type âconst GVariant *â {aka âconst struct _GVariant *â} > 408 | g_variant_get (GVariant *value, > | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ > >surf.c: In function âsetparameterâ: >surf.c:847:17: warning: âwebkit_web_context_set_tls_errors_policyâ is deprecated: Use 'webkit_website_data_manager_set_tls_errors_policy' instead [-Wdeprecated-declarations] > 847 | webkit_web_context_set_tls_errors_policy( > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >In file included from /usr/include/webkitgtk-4.0/webkit2/WebKitWebView.h:54, > from /usr/include/webkitgtk-4.0/webkit2/WebKitPrintOperation.h:30, > from /usr/include/webkitgtk-4.0/webkit2/webkit2.h:72, > from surf.c:29: >/usr/include/webkitgtk-4.0/webkit2/WebKitWebContext.h:251:1: note: declared here > 251 | webkit_web_context_set_tls_errors_policy (WebKitWebContext *context, > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >surf.c: In function ânewviewâ: >surf.c:1157:17: warning: âwebkit_web_context_set_tls_errors_policyâ is deprecated: Use 'webkit_website_data_manager_set_tls_errors_policy' instead [-Wdeprecated-declarations] > 1157 | webkit_web_context_set_tls_errors_policy(context, > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >/usr/include/webkitgtk-4.0/webkit2/WebKitWebContext.h:251:1: note: declared here > 251 | webkit_web_context_set_tls_errors_policy (WebKitWebContext *context, > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >surf.c: In function âreadsockâ: >surf.c:1239:60: warning: format â%dâ expects argument of type âintâ, but argument 3 has type âgsizeâ {aka âlong unsigned intâ} [-Wformat=] > 1239 | fprintf(stderr, "surf: message too short: %d\n", msgsz); > | ~^ ~~~~~ > | | | > | int gsize {aka long unsigned int} > | %ld >surf.c: In function âcreatewindowâ: >surf.c:1430:17: warning: âgtk_window_set_wmclassâ is deprecated [-Wdeprecated-declarations] > 1430 | gtk_window_set_wmclass(GTK_WINDOW(w), wmstr, "Surf"); > | ^~~~~~~~~~~~~~~~~~~~~~ >In file included from /usr/include/gtk-3.0/gtk/gtkdialog.h:32, > from /usr/include/gtk-3.0/gtk/gtkaboutdialog.h:30, > from /usr/include/gtk-3.0/gtk/gtk.h:31, > from surf.c:25: >/usr/include/gtk-3.0/gtk/gtkwindow.h:154:12: note: declared here > 154 | void gtk_window_set_wmclass (GtkWindow *window, > | ^~~~~~~~~~~~~~~~~~~~~~ >surf.c: In function âmsgextâ: >surf.c:1865:49: warning: format â%câ expects argument of type âintâ, but argument 4 has type âguint64â {aka âlong unsigned intâ} [-Wformat=] > 1865 | if ((ret = snprintf(msg, sizeof(msg), "%c%c%c", c->pageid, type, a->i)) > | ~^ ~~~~~~~~~ > | | | > | int guint64 {aka long unsigned int} > | %ld >surf.c:1872:56: warning: format â%uâ expects argument of type âunsigned intâ, but argument 3 has type âguint64â {aka âlong unsigned intâ} [-Wformat=] > 1872 | fprintf(stderr, "surf: error sending: %u%c%d (%d)\n", > | ~^ > | | > | unsigned int > | %lu > 1873 | c->pageid, type, a->i, ret); > | ~~~~~~~~~ > | | > | guint64 {aka long unsigned int} >webext-surf.c: In function âreadsockâ: >webext-surf.c:75:17: warning: ignoring return value of âjsc_context_evaluateâ declared with attribute âwarn_unused_resultâ [-Wunused-result] > 75 | jsc_context_evaluate(jsc, js, -1); > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >webext-surf.c:83:17: warning: ignoring return value of âjsc_context_evaluateâ declared with attribute âwarn_unused_resultâ [-Wunused-result] > 83 | jsc_context_evaluate(jsc, js, -1); > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >x86_64-pc-linux-gnu-gcc -shared -Wl,-soname,webext-surf.so -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o webext-surf.so webext-surf.o -lglib-2.0 -lwebkit2gtk-4.0 -lgtk-3 -lgdk-3 -lpangocairo-1.0 -lpango-1.0 -lharfbuzz -latk-1.0 -lcairo-gobject -lcairo -lgdk_pixbuf-2.0 -lsoup-2.4 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -ljavascriptcoregtk-4.0 -lgio-2.0 -lgobject-2.0 -lglib-2.0 >x86_64-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o surf surf.o -lX11 -lgcr-ui-3 -lgcr-base-3 -lgck-1 -lp11-kit -lwebkit2gtk-4.0 -lgtk-3 -lgdk-3 -lpangocairo-1.0 -lpango-1.0 -lharfbuzz -latk-1.0 -lcairo-gobject -lcairo -lgdk_pixbuf-2.0 -lsoup-2.4 -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -lgio-2.0 -ljavascriptcoregtk-4.0 -lgobject-2.0 -lglib-2.0 -lgthread-2.0 >>>> Source compiled. >>>> Test phase [not enabled]: www-client/surf-2.1-r1 > >>>> Install www-client/surf-2.1-r1 into /var/tmp/portage/www-client/surf-2.1-r1/image >make -j4 DESTDIR=/var/tmp/portage/www-client/surf-2.1-r1/image install >surf build options: >CC = x86_64-pc-linux-gnu-gcc >CFLAGS = -fPIC -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/lib64/libffi/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/gio-unix-2.0 -I/usr/include/sysprof-3 -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/dbus-1.0 -I/usr/lib64/dbus-1.0/include -I/usr/include/at-spi-2.0 -I/usr/include/gcr-3 -I/usr/include/gck-1 -I/usr/include/p11-kit-1 -I/usr/include/webkitgtk-4.0 -I/usr/include/libsoup-2.4 -I/usr/include/libxml2 -pthread -DVERSION="2.1" -DGCR_API_SUBJECT_TO_CHANGE -DLIBPREFIX="/usr/lib" -DWEBEXTDIR="/usr/lib/surf" -D_DEFAULT_SOURCE -pipe -march=native -fno-diagnostics-color -O2 >WEBEXTCFLAGS = -fPIC -I/usr/include/webkitgtk-4.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/lib64/libffi/include -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/gio-unix-2.0 -I/usr/include/sysprof-3 -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/dbus-1.0 -I/usr/lib64/dbus-1.0/include -I/usr/include/at-spi-2.0 -I/usr/include/libsoup-2.4 -I/usr/include/libxml2 -pthread -pipe -march=native -fno-diagnostics-color -O2 >LDFLAGS = -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 >mkdir -p /var/tmp/portage/www-client/surf-2.1-r1/image/usr/bin >cp -f surf /var/tmp/portage/www-client/surf-2.1-r1/image/usr/bin >chmod 755 /var/tmp/portage/www-client/surf-2.1-r1/image/usr/bin/surf >mkdir -p /var/tmp/portage/www-client/surf-2.1-r1/image/usr/lib/surf >cp -f webext-surf.so /var/tmp/portage/www-client/surf-2.1-r1/image/usr/lib/surf >for wlib in webext-surf.so; do \ > chmod 644 /var/tmp/portage/www-client/surf-2.1-r1/image/usr/lib/surf/$wlib; \ >done >mkdir -p /var/tmp/portage/www-client/surf-2.1-r1/image/usr/share/man/man1 >sed "s/VERSION/2.1/g" < surf.1 > /var/tmp/portage/www-client/surf-2.1-r1/image/usr/share/man/man1/surf.1 >chmod 644 /var/tmp/portage/www-client/surf-2.1-r1/image/usr/share/man/man1/surf.1 > * Your configuration for www-client/surf-2.1-r1 has been saved in > * "/etc/portage/savedconfig/www-client/surf-2.1-r1" for your editing pleasure. > * You can edit these files by hand and remerge this package with > * USE=savedconfig to customise the configuration. > * You can rename this file/directory to one of the following for > * its configuration to apply to multiple versions: > * ${PORTAGE_CONFIGROOT}/etc/portage/savedconfig/ > * [${CTARGET}|${CHOST}|""]/${CATEGORY}/[${PF}|${P}|${PN}] >>>> Completed installing www-client/surf-2.1-r1 into /var/tmp/portage/www-client/surf-2.1-r1/image > > * Final size of build directory: 284 KiB > * Final size of installed tree: 116 KiB > >strip: x86_64-pc-linux-gnu-strip --strip-unneeded -N __gentoo_check_ldflags__ -R .comment -R .GCC.command.line -R .note.gnu.gold-version > /usr/lib/surf/webext-surf.so > /usr/bin/surf > * checking 7 files for package collisions > * This package will overwrite one or more files that may belong to other > * packages (see list below). You can use a command such as `portageq > * owners / <filename>` to identify the installed package that owns a > * file. If portageq reports that only one package owns a file then do > * NOT file a bug report. A bug report is only useful if it identifies at > * least two or more packages that are known to install the same file(s). > * If a collision occurs and you can not explain where the file came from > * then you should simply ignore the collision since there is not enough > * information to determine if a real problem exists. Please do NOT file > * a bug report at https://bugs.gentoo.org/ unless you report exactly > * which two packages install the same file(s). See > * https://wiki.gentoo.org/wiki/Knowledge_Base:Blockers for tips on how > * to solve the problem. And once again, please do NOT file a bug report > * unless you have completely understood the above message. > * > * Detected file collision(s): > * > * /usr/bin/surf > * > * Searching all installed packages for file collisions... > * > * Press Ctrl-C to Stop > * > * sci-chemistry/molden-6.9:0::gentoo > * /usr/bin/surf > * > * Package 'www-client/surf-2.1-r1' NOT merged due to file collisions. If > * necessary, refer to your elog messages for the whole content of the > * above message.
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