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Gentoo's Bugzilla – Attachment 77054 Details for
Bug 118832
sci-biology/rebase-512 should be stabilised
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test-case output on ppc
rebase-diff (text/plain), 15.38 KB, created by
Tobias Scherbaum (RETIRED)
on 2006-01-14 00:54:32 UTC
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Description:
test-case output on ppc
Filename:
MIME Type:
Creator:
Tobias Scherbaum (RETIRED)
Created:
2006-01-14 00:54:32 UTC
Size:
15.38 KB
patch
obsolete
>--- phikz-orf144-ref.restrict 2005-12-13 19:48:53.000000000 +0100 >+++ phikz-orf144.restrict 2006-01-14 09:52:05.000000000 +0100 >@@ -1,6 +1,6 @@ > ######################################## > # Program: restrict >-# Rundate: Tue Dec 13 2005 13:48:31 >+# Rundate: Sat Jan 14 2006 09:52:05 > # Report_format: table > # Report_file: phikz-orf144.restrict > ######################################## >@@ -26,13 +26,13 @@ > 28 32 HphI GGTGA 40 39 . . > 37 34 MnlI CCTC 27 26 . . > 41 46 Hpy8I GTNNAC 43 43 . . >- 41 46 HincII GTYRAC 43 43 . . >+ 41 46 HindII GTYRAC 43 43 . . > 47 52 Hpy178III TCNNGA 48 50 . . > 51 46 Eco57MI CTGRAG 31 29 . . >- 51 46 BpmI CTGGAG 31 29 . . >+ 51 46 GsuI CTGGAG 31 29 . . > 58 61 MseI TTAA 58 60 . . > 60 65 ApoI RAATTY 60 64 . . >- 61 64 Tsp509I AATT 60 64 . . >+ 61 64 TspEI AATT 60 64 . . > 70 73 CviJI RGCY 71 71 . . > 84 79 MmeI TCCRAC 60 58 . . > 86 89 CviJI RGCY 87 87 . . >@@ -40,47 +40,47 @@ > 116 119 MseI TTAA 116 118 . . > 128 131 MseI TTAA 128 130 . . > 130 135 ApoI RAATTY 130 134 . . >- 131 134 Tsp509I AATT 130 134 . . >- 145 148 Tsp509I AATT 144 148 . . >+ 131 134 TspEI AATT 130 134 . . >+ 145 148 TspEI AATT 144 148 . . > 150 155 Hpy178III TCNNGA 151 153 . . > 150 155 XbaI TCTAGA 150 154 . . >- 151 154 BfaI CTAG 151 153 . . >+ 151 154 MaeI CTAG 151 153 . . > 164 160 BccI CCATC 154 155 . . > 186 189 CviJI RGCY 187 187 . . >- 191 194 Tsp509I AATT 190 194 . . >+ 191 194 TspEI AATT 190 194 . . > 203 208 SspI AATATT 205 205 . . > 222 227 PsiI TTATAA 224 224 . . > 246 249 CviRI TGCA 247 247 . . > 257 262 BsaAI YACGTR 259 259 . . >- 257 262 AcvI CACGTG 259 259 . . >+ 257 262 PmaCI CACGTG 259 259 . . > 258 261 TaiI ACGT 261 257 . . > 258 261 MaeII ACGT 258 260 . . > 260 265 BsgI GTGCAG 281 279 . . > 261 264 CviRI TGCA 262 262 . . > 262 266 BthCI GCNGC 265 262 . . >- 262 266 BisI GCNGC 263 264 . . >+ 262 266 Fnu4HI GCNGC 263 264 . . > 262 266 BbvI GCAGC 274 278 . . > 262 266 TseI GCWGC 262 265 . . >- 263 268 MspA1I CMGCKG 265 265 . . >- 263 268 BamGI CAGCTG 265 265 . . >+ 263 268 NspBII CMGCKG 265 265 . . >+ 263 268 PvuII CAGCTG 265 265 . . > 264 267 CviJI RGCY 265 265 . . > 264 267 AluI AGCT 265 265 . . > 265 269 BthCI GCNGC 268 265 . . >- 265 269 BisI GCNGC 266 267 . . >+ 265 269 Fnu4HI GCNGC 266 267 . . > 265 269 TseI GCWGC 265 268 . . > 267 270 CviRI TGCA 268 268 . . > 269 265 BbvI GCAGC 252 256 . . > 277 272 Eco57MI CTGRAG 257 255 . . >- 277 272 BpmI CTGGAG 257 255 . . >+ 277 272 GsuI CTGGAG 257 255 . . > 278 274 BsrI ACTGG 274 272 . . > 280 284 TspDTI ATGAA 295 293 . . > 282 287 BsmI GAATGC 288 286 . . > 285 288 CviRI TGCA 286 286 . . > 301 305 BsrI ACTGG 306 304 . . >- 305 315 Bce4I GCNNNNNNNGC 311 308 . . >+ 305 315 MwoI GCNNNNNNNGC 311 308 . . > 313 316 CviJI RGCY 314 314 . . > 319 315 BsrI ACTGG 315 313 . . >- 343 347 PfeI GAWTC 343 346 . . >+ 343 347 TfiI GAWTC 343 346 . . > 343 347 HinfI GANTC 343 346 . . > 353 356 TaqI TCGA 353 355 . . > 353 356 EsaBC3I TCGA 354 354 . . >@@ -96,12 +96,12 @@ > 388 392 BsrI ACTGG 393 391 . . > 395 400 NlaIV GGNNCC 397 397 . . > 399 413 XcmI CCANNNNNNNNNTGG 406 405 . . >- 401 404 Tsp509I AATT 400 404 . . >+ 401 404 TspEI AATT 400 404 . . > 409 413 BsrI ACTGG 414 412 . . > 416 419 NlaIII CATG 419 415 . . > 416 419 FatI CATG 415 419 . . > 416 419 CviAII CATG 416 418 . . >- 436 439 Tsp509I AATT 435 439 . . >+ 436 439 TspEI AATT 435 439 . . > 444 447 NlaIII CATG 447 443 . . > 444 447 FatI CATG 443 447 . . > 444 447 CviAII CATG 444 446 . . >@@ -112,29 +112,29 @@ > 466 469 ChaI GATC 469 465 . . > 466 469 DpnI GATC 467 467 . . > 466 469 BspKT6I GATC 468 466 . . >- 466 469 Sau3AI GATC 465 469 . . >+ 466 469 MboI GATC 465 469 . . > 468 473 MmeI TCCRAC 493 491 . . >- 470 466 AlwI GGATC 460 461 . . >+ 470 466 BinI GGATC 460 461 . . > 472 476 BsrI ACTGG 477 475 . . >- 472 477 BmrI ACTGGG 482 481 . . >+ 472 477 BfiI ACTGGG 482 481 . . > 482 487 SnaBI TACGTA 484 484 . . > 482 487 BsaAI YACGTR 484 484 . . > 483 486 TaiI ACGT 486 482 . . > 483 486 MaeII ACGT 483 485 . . >- 489 494 BloHI RGATCY 489 493 . . >+ 489 494 XhoII RGATCY 489 493 . . > 490 493 ChaI GATC 493 489 . . > 490 493 DpnI GATC 491 491 . . > 490 493 BspKT6I GATC 492 490 . . >- 490 493 Sau3AI GATC 489 493 . . >+ 490 493 MboI GATC 489 493 . . > 494 499 BsaAI YACGTR 496 496 . . >- 494 490 AlwI GGATC 484 485 . . >+ 494 490 BinI GGATC 484 485 . . > 495 498 TaiI ACGT 498 494 . . > 495 498 MaeII ACGT 495 497 . . > 508 511 MseI TTAA 508 510 . . > 514 519 NlaIV GGNNCC 516 516 . . >- 514 519 BanI GGYRCC 514 518 . . >+ 514 519 HgiCI GGYRCC 514 518 . . > 517 512 TaqII CACCCA 502 500 . . >- 525 528 Tsp509I AATT 524 528 . . >+ 525 528 TspEI AATT 524 528 . . > 527 530 MseI TTAA 527 529 . . > 538 542 TspDTI ATGAA 553 551 . . > 541 546 SspI AATATT 543 543 . . >@@ -147,23 +147,23 @@ > 583 586 ChaI GATC 586 582 . . > 583 586 DpnI GATC 584 584 . . > 583 586 BspKT6I GATC 585 583 . . >- 583 586 Sau3AI GATC 582 586 . . >+ 583 586 MboI GATC 582 586 . . > 594 597 CviJI RGCY 595 595 . . > 594 597 AluI AGCT 595 595 . . > 607 611 UnbI GGNCC 606 611 . . > 607 611 FmuI GGNCC 610 607 . . > 607 611 BmgT120I GGNCC 608 609 . . >- 607 611 Sau96I GGNCC 607 610 . . >+ 607 611 AsuI GGNCC 607 610 . . > 608 611 CviJI RGCY 609 609 . . >- 608 611 BanAI GGCC 609 609 . . >+ 608 611 HaeIII GGCC 609 609 . . > 610 614 BssKI CCNGG 609 614 . . > 610 614 ScrFI CCNGG 611 612 . . >- 610 614 AjnI CCWGG 609 614 . . >+ 610 614 EcoRII CCWGG 609 614 . . > 610 614 AeuI CCWGG 611 612 . . > 614 619 BsgI GTGCAG 635 633 . . > 615 618 CviRI TGCA 616 616 . . > 616 620 BthCI GCNGC 619 616 . . >- 616 620 BisI GCNGC 617 618 . . >+ 616 620 Fnu4HI GCNGC 617 618 . . > 616 620 BbvI GCAGC 628 632 . . > 616 620 TseI GCWGC 616 619 . . > 618 621 CviJI RGCY 619 619 . . >@@ -173,16 +173,16 @@ > 636 642 TspRI CASTGNN 642 633 . . > 637 641 BsrI ACTGG 642 640 . . > 639 644 HaeI WGGCCW 641 641 . . >- 639 644 EaeI YGGCCR 639 643 . . >- 639 644 MscI TGGCCA 641 641 . . >+ 639 644 CfrI YGGCCR 639 643 . . >+ 639 644 BalI TGGCCA 641 641 . . > 640 643 CviJI RGCY 641 641 . . >- 640 643 BanAI GGCC 641 641 . . >+ 640 643 HaeIII GGCC 641 641 . . > 647 651 TspDTI ATGAA 662 660 . . >- 650 653 Tsp509I AATT 649 653 . . >+ 650 653 TspEI AATT 649 653 . . > 654 657 CviJI RGCY 655 655 . . > 654 657 AluI AGCT 655 655 . . > 655 659 BthCI GCNGC 658 655 . . >- 655 659 BisI GCNGC 656 657 . . >+ 655 659 Fnu4HI GCNGC 656 657 . . > 655 659 TseI GCWGC 655 658 . . > 659 655 BbvI GCAGC 642 646 . . > 678 681 CviJI RGCY 679 679 . . >@@ -193,7 +193,7 @@ > 685 679 Bpu10I CCTNAGC 680 683 . . > 691 695 BccI CCATC 699 700 . . > 702 707 PsiI TTATAA 704 704 . . >- 715 719 BssIMI GGGTC 716 719 . . >+ 715 719 SimI GGGTC 716 719 . . > 716 712 BccI CCATC 706 707 . . > 716 722 BstEII GGTNACC 716 721 . . > 717 721 MaeIII GTNAC 716 721 . . >@@ -209,7 +209,7 @@ > 758 754 BccI CCATC 748 749 . . > 765 768 CviRI TGCA 766 766 . . > 766 770 BthCI GCNGC 769 766 . . >- 766 770 BisI GCNGC 767 768 . . >+ 766 770 Fnu4HI GCNGC 767 768 . . > 766 770 BbvI GCAGC 778 782 . . > 766 770 TseI GCWGC 766 769 . . >
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