build log

slurm (text/plain), 17.49 KB, created by Jakov Smolić on 2022-02-13 21:53:29 UTC

* Package:    sys-cluster/slurm-20.11.0.1-r104
 * Repository: gentoo
 * Maintainer: [e-mail] [e-mail]
 * USE:        X abi_x86_32 elibc_glibc kernel_linux lua_single_target_lua5-1 munge pam userland_GNU x86
 * FEATURES:   network-sandbox preserve-libs sandbox test userpriv usersandbox
>>> Unpacking source...
>>> Unpacking slurm-20-11-0-1.tar.gz to /var/tmp/portage/sys-cluster/slurm-20.11.0.1-r104/work
>>> Source unpacked in /var/tmp/portage/sys-cluster/slurm-20.11.0.1-r104/work
>>> Preparing source in /var/tmp/portage/sys-cluster/slurm-20.11.0.1-r104/work/slurm-slurm-20-11-0-1 ...
 * Applying slurm-20.11.0.1_autoconf-lua.patch ...
 [ ok ]
 * Running eautoreconf in '/var/tmp/portage/sys-cluster/slurm-20.11.0.1-r104/work/slurm-slurm-20-11-0-1' ...
 * Running 'libtoolize --install --copy --force --automake' ...
 [ ok ]
 * Running 'aclocal -I auxdir --system-acdir=/var/tmp/portage/sys-cluster/slurm-20.11.0.1-r104/temp/aclocal' ...
 [ ok ]
 * Running 'autoconf --force' ...
 [ ok ]
 * Running 'autoheader' ...
 [ ok ]
 * Running 'automake --add-missing --copy --foreign --force-missing' ...
 [ ok ]
 * Running elibtoolize in: slurm-slurm-20-11-0-1/
 * Running elibtoolize in: slurm-slurm-20-11-0-1/auxdir/
 *   Applying portage/1.2.0 patch ...
 *   Applying sed/1.5.6 patch ...
 *   Applying as-needed/2.4.3 patch ...
 *   Applying static-flags/2.4.6 patch ...
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sys-cluster/slurm-20.11.0.1-r104/work/slurm-slurm-20-11-0-1 ...
 * econf: updating slurm-slurm-20-11-0-1/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating slurm-slurm-20-11-0-1/auxdir/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating slurm-slurm-20-11-0-1/auxdir/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating slurm-slurm-20-11-0-1/config.sub with /usr/share/gnuconfig/config.sub
./configure --prefix=/usr --build=i686-pc-linux-gnu --host=i686-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --disable-silent-rules --docdir=/usr/share/doc/slurm-20.11.0.1-r104 --htmldir=/usr/share/doc/slurm-20.11.0.1-r104/html --with-sysroot=/ --libdir=/usr/lib --sysconfdir=/etc/slurm --with-hwloc=/usr --htmldir=/usr/share/doc/slurm-20.11.0.1-r104 --with-pam_dir=/lib/security --without-mysql_config --disable-debug --disable-lua --enable-pam --enable-x11 --with-munge --without-json --without-hdf5 --without-ofed --without-ucx --disable-static --disable-multiple-slurmd
configure: loading site script /usr/share/config.site
checking build system type... i686-pc-linux-gnu
checking host system type... i686-pc-linux-gnu
checking target system type... i686-pc-linux-gnu
checking for a BSD-compatible install... /usr/lib/portage/python3.9/ebuild-helpers/xattr/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking whether to include rpath in build... yes
checking whether make supports the include directive... yes (GNU style)
checking for i686-pc-linux-gnu-gcc... i686-pc-linux-gnu-gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether i686-pc-linux-gnu-gcc accepts -g... yes
checking for i686-pc-linux-gnu-gcc option to enable C11 features... none needed
checking whether i686-pc-linux-gnu-gcc understands -c and -o together... yes
checking dependency style of i686-pc-linux-gnu-gcc... none
checking for mysql_config... /usr/bin/mysql_config
MySQL 8.0.27 test program built properly.
checking for i686-pc-linux-gnu-gcc... (cached) i686-pc-linux-gnu-gcc
checking whether the compiler supports GNU C... (cached) yes
checking whether i686-pc-linux-gnu-gcc accepts -g... (cached) yes
checking for i686-pc-linux-gnu-gcc option to enable C11 features... (cached) none needed
checking whether i686-pc-linux-gnu-gcc understands -c and -o together... (cached) yes
checking dependency style of i686-pc-linux-gnu-gcc... (cached) none
checking for i686-pc-linux-gnu-g++... i686-pc-linux-gnu-g++
checking whether the compiler supports GNU C++... yes
checking whether i686-pc-linux-gnu-g++ accepts -g... yes
checking for i686-pc-linux-gnu-g++ option to enable C++11 features... none needed
checking dependency style of i686-pc-linux-gnu-g++... none
checking whether make sets $(MAKE)... (cached) yes
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by i686-pc-linux-gnu-gcc... /usr/i686-pc-linux-gnu/bin/ld
checking if the linker (/usr/i686-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/i686-pc-linux-gnu-nm -B
checking the name lister (/usr/bin/i686-pc-linux-gnu-nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop
checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/i686-pc-linux-gnu/bin/ld option to reload object files... -r
checking for i686-pc-linux-gnu-objdump... i686-pc-linux-gnu-objdump
checking how to recognize dependent libraries... pass_all
checking for i686-pc-linux-gnu-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s

checking for i686-pc-linux-gnu-ar... i686-pc-linux-gnu-ar
checking for archiver @FILE support... @
checking for i686-pc-linux-gnu-strip... i686-pc-linux-gnu-strip
checking for i686-pc-linux-gnu-ranlib... i686-pc-linux-gnu-ranlib
checking command to parse /usr/bin/i686-pc-linux-gnu-nm -B output from i686-pc-linux-gnu-gcc object... ok
checking for sysroot... /
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for i686-pc-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for sys/time.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if i686-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no
checking for i686-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC
checking if i686-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes
checking if i686-pc-linux-gnu-gcc static flag -static works... yes
checking if i686-pc-linux-gnu-gcc supports -c -o file.o... yes
checking if i686-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes
checking whether the i686-pc-linux-gnu-gcc linker (/usr/i686-pc-linux-gnu/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking how to run the C++ preprocessor... i686-pc-linux-gnu-g++ -E
checking for ld used by i686-pc-linux-gnu-g++... /usr/i686-pc-linux-gnu/bin/ld
checking if the linker (/usr/i686-pc-linux-gnu/bin/ld) is GNU ld... yes
checking whether the i686-pc-linux-gnu-g++ linker (/usr/i686-pc-linux-gnu/bin/ld) supports shared libraries... yes
checking for i686-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC
checking if i686-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes
checking if i686-pc-linux-gnu-g++ static flag -static works... yes
checking if i686-pc-linux-gnu-g++ supports -c -o file.o... yes
checking if i686-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes
checking whether the i686-pc-linux-gnu-g++ linker (/usr/i686-pc-linux-gnu/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for i686-pc-linux-gnu-pkg-config... /usr/bin/i686-pc-linux-gnu-pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for -objcopy... no
checking for objcopy... objcopy
checking for sleep... /usr/bin/sleep
checking for su... /bin/su
checking for library containing socket... none required
checking for library containing gethostbyname... none required
checking for library containing hstrerror... none required
checking for library containing kstat_open... no
checking for library containing ns_initparse... -lresolv
checking for library containing log... -lm
checking for library containing lrint... none required
checking for mcheck.h... yes
checking for values.h... yes
checking for socket.h... no
checking for sys/socket.h... yes
checking for stdbool.h... yes
checking for sys/ipc.h... yes
checking for sys/shm.h... yes
checking for sys/sem.h... yes
checking for errno.h... yes
checking for stdlib.h... (cached) yes
checking for dirent.h... yes
checking for pthread.h... yes
checking for sys/prctl.h... yes
checking for sysint.h... no
checking for inttypes.h... (cached) yes
checking for termcap.h... yes
checking for netdb.h... yes
checking for sys/socket.h... (cached) yes
checking for sys/systemcfg.h... no
checking for sys/dr.h... no
checking for sys/vfs.h... yes
checking for pam/pam_appl.h... no
checking for security/pam_appl.h... yes
checking for sys/sysctl.h... no
checking for pty.h... yes
checking for utmp.h... yes
checking for sys/syslog.h... yes
checking for linux/sched.h... yes
checking for kstat.h... no
checking for paths.h... yes
checking for limits.h... yes
checking for sys/statfs.h... yes
checking for sys/ptrace.h... yes
checking for float.h... yes
checking for sys/statvfs.h... yes
checking for sys/wait.h that is POSIX.1 compatible... yes
checking for egrep... (cached) /bin/grep -E
checking for sys/mkdev.h... no
checking for sys/sysmacros.h... yes
checking library containing dlopen... checking for dlopen in -l... no
checking for dlopen in -ldl... yes
checking for program_invocation_name... yes
checking for ptrace64... no
checking for numa_available in -lnuma... yes
checking whether to enable PAM support... yes
checking for pam_get_user in -lpam... yes
checking for misc_conv in -lpam_misc... yes
checking Link to libslurm.so instead of libslurm.o... shared
checking whether sbatch --get-user-env option should load .login... no
checking whether byte ordering is bigendian... no
checking for C99 support... yes
checking whether C compiler accepts -fno-omit-frame-pointer... yes
checking for uid_t and gid_t data sizes)... yes
configure: WARNING: support for json disabled
checking for jwt installation... 
configure: WARNING: unable to locate jwt library
checking for http-parser installation... /usr
checking for libyaml installation... /usr
checking how to run the C preprocessor... i686-pc-linux-gnu-gcc -E
checking whether i686-pc-linux-gnu-gcc needs -traditional... no
checking for __builtin_clzll... yes
checking for __builtin_ctzll... yes
checking for __builtin_popcountll... yes
checking for i686-pc-linux-gnu-gcc options needed to detect all undeclared functions... none needed
checking whether strerror_r is declared... yes
checking whether strerror_r returns char *... no
checking for fdatasync... yes
checking for hstrerror... yes
checking for strerror... yes
checking for mtrace... yes
checking for strndup... yes
checking for strlcpy... no
checking for strsignal... yes
checking for inet_aton... yes
checking for inet_ntop... yes
checking for inet_pton... yes
checking for setproctitle... no
checking for sysctlbyname... no
checking for cfmakeraw... yes
checking for setresuid... yes
checking for get_current_dir_name... yes
checking for faccessat... yes
checking for eaccess... yes
checking for statvfs... yes
checking for statfs... yes
checking for memfd_create... yes
checking whether hstrerror is declared... no
checking whether strsignal is declared... yes
checking whether sys_siglist is declared... no
checking for the pthreads library -lpthreads... no
checking whether pthreads work without any flags... yes
checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
checking if more special flags are required for pthreads... no
checking for PTHREAD_PRIO_INHERIT... yes
checking System dimensions... not set
configure: WARNING: support for ofed disabled
checking if zlib is wanted... yes
checking for inflateEnd in -lz... yes
checking for zlib.h... yes
checking if lz4 is installed... yes /usr/local /usr /opt/local /sw
checking for LZ4_compress_destSize in -llz4... yes
checking for lz4.h... yes
LZ4 test program built properly.
checking for hwloc installation... /usr

checking for nvml.h... no
checking for nvmlInit in -lnvidia-ml... no
configure: WARNING: unable to locate libnvidia-ml.so and/or nvml.h
checking whether RSMI/ROCm in installed in this system... 
checking for rocm_smi/rocm_smi.h... no
checking for rsmi_init in -lrocm_smi64... no
checking for rsmi_dev_drm_render_minor_get in -lrocm_smi64... no
configure: WARNING: unable to locate librocm_smi64.so and/or rocm_smi.h
checking for pmix installation... 
configure: WARNING: unable to locate pmix installation
checking for freeipmi installation... /usr
checking for rrdtool installation... 
configure: WARNING: unable to locate rrdtool installation
configure: support for ucx disabled
checking whether Slurm internal X11 support is enabled... yes
checking for CHECK... yes
checking for i686-pc-linux-gnu-pkg-config... (cached) /usr/bin/i686-pc-linux-gnu-pkg-config
checking pkg-config is at least version 0.16... yes
checking for GLIB... yes
checking for GLIB - version >= 2.7.1... yes (version 2.70.2)
configure: WARNING: cannot build sview without gtk library
checking whether this is a Cray system... Unable to locate Cray APIs (usually in /opt/cray/alpscomm and /opt/cray/job)
checking for datawarp installation... 
configure: WARNING: unable to locate DataWarp installation
checking for __progname... yes
checking whether optimizations are enabled... yes
checking whether or not developer options are enabled... no
checking whether debugging is enabled... no
checking whether memory leak debugging is enabled... no
checking whether to enable slurmd operation on a front-end... no
checking whether debugger partial attach enabled... no
checking whether salloc should kill child processes at job termination... no
checking whether to disable salloc execution in the background... no
checking for slurmctld default port... 6817
checking for slurmd default port... 6818
checking for slurmdbd default port... 6819
checking for slurmctld default port count... 1
checking whether to compile slurmrestd... no
checking for slurmrestd default port... 6820
checking for netloc installation... 
configure: WARNING: unable to locate netloc installation
checking whether to enable support for job scripts written in Lua... no
checking whether man2html is available... checking for man2html... yes
checking for support of printf("%s", NULL)... yes
checking for whether to include readline suport... yes
checking for systemd presence... yes
checking for munge installation... /usr
checking whether to enable multiple-slurmd support... no
checking for openpty in -lutil... yes
checking for gawk... (cached) gawk
checking for curl-config... /usr/bin/curl-config
checking for the version of libcurl... 7.79.1
checking whether libcurl is usable... yes
checking for curl_free... yes
checking size of void *... 4
checking whether deprecated options are enabled... no
configure: error: 32-bit support is deprecated, and not tested regularly. Use at your own risk.

!!! Please attach the following file when seeking support:
!!! /var/tmp/portage/sys-cluster/slurm-20.11.0.1-r104/work/slurm-slurm-20-11-0-1/config.log
 * ERROR: sys-cluster/slurm-20.11.0.1-r104::gentoo failed (configure phase):
 *   econf failed
 * 
 * Call stack:
 *               ebuild.sh, line  127:  Called src_configure
 *             environment, line 3530:  Called econf '--sysconfdir=/etc/slurm' '--with-hwloc=/usr' '--htmldir=/usr/share/doc/slurm-20.11.0.1-r104' '--with-pam_dir=/lib/security' '--without-mysql_config' '--disable-debug' '--disable-lua' '--enable-pam' '--enable-x11' '--with-munge' '--without-json' '--without-hdf5' '--without-ofed' '--without-ucx' '--disable-static' '--disable-multiple-slurmd'
 *        phase-helpers.sh, line  711:  Called __helpers_die 'econf failed'
 *   isolated-functions.sh, line  112:  Called die
 * The specific snippet of code:
 *   		die "$@"
 * 
 * If you need support, post the output of `emerge --info '=sys-cluster/slurm-20.11.0.1-r104::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sys-cluster/slurm-20.11.0.1-r104::gentoo'`.
 * The complete build log is located at '/var/tmp/portage/sys-cluster/slurm-20.11.0.1-r104/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sys-cluster/slurm-20.11.0.1-r104/temp/environment'.
 * Working directory: '/var/tmp/portage/sys-cluster/slurm-20.11.0.1-r104/work/slurm-slurm-20-11-0-1'
 * S: '/var/tmp/portage/sys-cluster/slurm-20.11.0.1-r104/work/slurm-slurm-20-11-0-1'