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Gentoo's Bugzilla – Attachment 699315 Details for
Bug 782238
dev-python/h5py-3.2.1 fails test TestOffsets.test_float_round_tripping: AttributeError: module 'numpy' has no attribute 'float128'
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build.log
build.log (text/plain), 135.52 KB, created by
Thomas Deutschmann (RETIRED)
on 2021-04-11 19:51:48 UTC
(
hide
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Description:
build.log
Filename:
MIME Type:
Creator:
Thomas Deutschmann (RETIRED)
Created:
2021-04-11 19:51:48 UTC
Size:
135.52 KB
patch
obsolete
> * Package: dev-python/h5py-3.2.1 > * Repository: gentoo > * Maintainer: python@gentoo.org sci@gentoo.org > * USE: abi_x86_32 elibc_glibc kernel_linux python_targets_python3_8 test userland_GNU x86 > * FEATURES: ccache network-sandbox preserve-libs sandbox test userpriv usersandbox >>>> Unpacking source... >>>> Unpacking h5py-3.2.1.tar.gz to /var/tmp/portage/dev-python/h5py-3.2.1/work >>>> Source unpacked in /var/tmp/portage/dev-python/h5py-3.2.1/work >>>> Preparing source in /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1 ... >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1 ... >>>> Source configured. >>>> Compiling source in /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1 ... > * python3_8: running distutils-r1_run_phase distutils-r1_python_compile >python3.8 setup.py build -j 5 >running build >running build_py >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py >copying h5py/h5py_warnings.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py >copying h5py/ipy_completer.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py >copying h5py/version.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py >copying h5py/__init__.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_hl >copying h5py/_hl/group.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_hl >copying h5py/_hl/compat.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_hl >copying h5py/_hl/base.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_hl >copying h5py/_hl/filters.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_hl >copying h5py/_hl/files.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_hl >copying h5py/_hl/dataset.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_hl >copying h5py/_hl/selections2.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_hl >copying h5py/_hl/datatype.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_hl >copying h5py/_hl/dims.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_hl >copying h5py/_hl/selections.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_hl >copying h5py/_hl/__init__.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_hl >copying h5py/_hl/vds.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_hl >copying h5py/_hl/attrs.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_hl >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_objects.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_base.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_dataset_getitem.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_dimension_scales.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_file.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_big_endian_file.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_attribute_create.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_datatype.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_h5p.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/common.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_selections.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/conftest.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_h5d_direct_chunk.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_h5.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_dataset.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_attrs_data.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_file2.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_h5f.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_h5o.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_h5pl.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_dims_dimensionproxy.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_dtype.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_filters.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_file_image.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_slicing.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_errors.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_completions.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_dataset_swmr.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_group.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_attrs.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/__init__.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >copying h5py/tests/test_h5t.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/data_files >copying h5py/tests/data_files/__init__.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/data_files >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/test_vds >copying h5py/tests/test_vds/test_highlevel_vds.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/test_vds >copying h5py/tests/test_vds/test_lowlevel_vds.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/test_vds >copying h5py/tests/test_vds/__init__.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/test_vds >copying h5py/tests/test_vds/test_virtual_source.py -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/test_vds >copying h5py/tests/data_files/vlen_string_dset.h5 -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/data_files >copying h5py/tests/data_files/vlen_string_dset_utc.h5 -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/data_files >copying h5py/tests/data_files/vlen_string_s390x.h5 -> /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/data_files >warning: build_py: byte-compiling is disabled, skipping. > >running build_ext >Loading library to get build settings and version: libhdf5.so >******************************************************************************** > Summary of the h5py configuration > >HDF5 include dirs: [] >HDF5 library dirs: [] > HDF5 Version: (1, 10, 5) > MPI Enabled: False > ROS3 VFD Enabled: False > Rebuild Required: True > >******************************************************************************** >Executing api_gen rebuild of defs >Executing cythonize() >[ 1/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_conv.pyx >[ 2/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_errors.pyx >[ 3/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_objects.pyx >[ 4/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_proxy.pyx >[ 5/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_selector.pyx >[ 6/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/defs.pyx >[ 7/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5.pyx >[ 8/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5a.pyx >[ 9/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5ac.pyx >[10/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5d.pyx >[11/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5ds.pyx >[12/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5f.pyx >[13/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5fd.pyx >[14/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5g.pyx >[15/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5i.pyx >[16/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5l.pyx >[17/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5o.pyx >[18/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5p.pyx >[19/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5pl.pyx >[20/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5r.pyx >[21/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5s.pyx >[22/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5t.pyx >[23/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5z.pyx >[24/24] Cythonizing /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/utils.pyx >building 'h5py.defs' extension >building 'h5py._errors' extension >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8 >building 'h5py._objects' extension >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8 >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var >building 'h5py._proxy' extension >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp >building 'h5py.h5fd' extension >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1 >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1 >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1 >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1 >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1 >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1 >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1 >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_objects.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_objects.o >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_errors.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_errors.o >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_proxy.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_proxy.o >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5fd.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5fd.o >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/defs.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/defs.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_proxy.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_proxy.cpython-38-i386-linux-gnu.so >h5py/_errors.c: In function â__pyx_f_4h5py_7_errors_walk_cbâ: >h5py/_errors.c:1898:13: warning: assignment discards âconstâ qualifier from pointer target type [-Wdiscarded-qualifiers] > 1898 | __pyx_t_3 = (__pyx_v_desc[0]).desc; > | ^ >h5py/_errors.c: In function â__pyx_f_4h5py_7_errors_set_exceptionâ: >h5py/_errors.c:2019:64: warning: passing argument 3 of âH5Ewalk2â from incompatible pointer type [-Wincompatible-pointer-types] > 2019 | __pyx_t_1 = ((H5Ewalk(((hid_t)H5E_DEFAULT), H5E_WALK_UPWARD, __pyx_f_4h5py_7_errors_walk_cb, (&__pyx_v_err)) < 0) != 0); > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > | | > | herr_t (*)(int, H5E_error2_t *, void *) {aka int (*)(int, H5E_error2_t *, void *)} >In file included from /usr/include/hdf5.h:26, > from h5py/api_compat.h:27, > from h5py/_errors.c:657: >/usr/include/H5Epublic.h:169:80: note: expected âH5E_walk2_tâ {aka âint (*)(unsigned int, const H5E_error2_t *, void *)â} but argument is of type âherr_t (*)(int, H5E_error2_t *, void *)â {aka âint (*)(int, H5E_error2_t *, void *)â} > 169 | H5_DLL herr_t H5Ewalk2(hid_t err_stack, H5E_direction_t direction, H5E_walk2_t func, > | ~~~~~~~~~~~~^~~~ >h5py/_errors.c:2218:13: warning: assignment discards âconstâ qualifier from pointer target type [-Wdiscarded-qualifiers] > 2218 | __pyx_t_8 = __pyx_v_err.err.desc; > | ^ >h5py/_errors.c:2269:66: warning: passing argument 3 of âH5Ewalk2â from incompatible pointer type [-Wincompatible-pointer-types] > 2269 | __pyx_t_1 = ((H5Ewalk(((hid_t)H5E_DEFAULT), H5E_WALK_DOWNWARD, __pyx_f_4h5py_7_errors_walk_cb, (&__pyx_v_err)) < 0) != 0); > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > | | > | herr_t (*)(int, H5E_error2_t *, void *) {aka int (*)(int, H5E_error2_t *, void *)} >In file included from /usr/include/hdf5.h:26, > from h5py/api_compat.h:27, > from h5py/_errors.c:657: >/usr/include/H5Epublic.h:169:80: note: expected âH5E_walk2_tâ {aka âint (*)(unsigned int, const H5E_error2_t *, void *)â} but argument is of type âherr_t (*)(int, H5E_error2_t *, void *)â {aka âint (*)(int, H5E_error2_t *, void *)â} > 169 | H5_DLL herr_t H5Ewalk2(hid_t err_stack, H5E_direction_t direction, H5E_walk2_t func, > | ~~~~~~~~~~~~^~~~ >h5py/_errors.c:2301:13: warning: assignment discards âconstâ qualifier from pointer target type [-Wdiscarded-qualifiers] > 2301 | __pyx_t_8 = __pyx_v_err.err.desc; > | ^ >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_errors.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_errors.cpython-38-i386-linux-gnu.so >building 'h5py.h5z' extension >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf >creating /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5z.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5z.o >building 'h5py.h5' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5.o >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf_filter.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf_filter.o >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf/lzf_c.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf/lzf_c.o >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf/lzf_d.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf/lzf_d.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5z.o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf_filter.o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf/lzf_c.o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf/lzf_d.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5z.cpython-38-i386-linux-gnu.so >building 'h5py.h5i' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5i.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5i.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_objects.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_objects.cpython-38-i386-linux-gnu.so >building 'h5py.h5r' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5r.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5r.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5.cpython-38-i386-linux-gnu.so >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5i.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5i.cpython-38-i386-linux-gnu.so >building 'h5py.utils' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/utils.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/utils.o >building 'h5py._selector' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_selector.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_selector.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5fd.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5fd.cpython-38-i386-linux-gnu.so >building 'h5py._conv' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_conv.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_conv.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5r.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5r.cpython-38-i386-linux-gnu.so >building 'h5py.h5t' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5t.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5t.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/utils.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/utils.cpython-38-i386-linux-gnu.so >building 'h5py.h5s' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5s.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5s.o >h5py/defs.c: In function â__pyx_f_4h5py_4defs_H5DOread_chunkâ: >h5py/defs.c:10209:86: warning: passing argument 4 of âH5DOread_chunkâ from incompatible pointer type [-Wincompatible-pointer-types] >10209 | __pyx_v_r = H5DOread_chunk(__pyx_v_dset_id, __pyx_v_dxpl_id, __pyx_v_offset, __pyx_v_filters, __pyx_v_buf); > | ^~~~~~~~~~~~~~~ > | | > | __pyx_t_5numpy_uint32_t * {aka long unsigned int *} >In file included from /usr/include/hdf5_hl.h:23, > from h5py/defs.c:661: >/usr/include/H5DOpublic.h:41:15: note: expected âuint32_t *â {aka âunsigned int *â} but argument is of type â__pyx_t_5numpy_uint32_t *â {aka âlong unsigned int *â} > 41 | uint32_t *filters /*out*/, void *buf /*out*/); > | ~~~~~~~~~~^~~~~~~ >h5py/defs.c: In function â__pyx_f_4h5py_4defs_H5Dread_chunkâ: >h5py/defs.c:10374:85: warning: passing argument 4 of âH5Dread_chunkâ from incompatible pointer type [-Wincompatible-pointer-types] >10374 | __pyx_v_r = H5Dread_chunk(__pyx_v_dset_id, __pyx_v_dxpl_id, __pyx_v_offset, __pyx_v_filters, __pyx_v_buf); > | ^~~~~~~~~~~~~~~ > | | > | __pyx_t_5numpy_uint32_t * {aka long unsigned int *} >In file included from /usr/include/hdf5.h:25, > from h5py/api_compat.h:27, > from h5py/defs.c:657: >/usr/include/H5Dpublic.h:155:46: note: expected âuint32_t *â {aka âunsigned int *â} but argument is of type â__pyx_t_5numpy_uint32_t *â {aka âlong unsigned int *â} > 155 | const hsize_t *offset, uint32_t *filters, void *buf); > | ~~~~~~~~~~^~~~~~~ >h5py/defs.c: In function â__pyx_f_4h5py_4defs_H5Pget_driver_infoâ: >h5py/defs.c:26844:13: warning: assignment discards âconstâ qualifier from pointer target type [-Wdiscarded-qualifiers] >26844 | __pyx_v_r = H5Pget_driver_info(__pyx_v_plist_id); > | ^ >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/defs.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/defs.cpython-38-i386-linux-gnu.so >building 'h5py.h5p' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5p.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5p.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5s.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5s.cpython-38-i386-linux-gnu.so >building 'h5py.h5d' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5d.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5d.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_selector.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_selector.cpython-38-i386-linux-gnu.so >building 'h5py.h5a' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5a.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5a.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/_conv.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/_conv.cpython-38-i386-linux-gnu.so >building 'h5py.h5f' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5f.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5f.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5d.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5d.cpython-38-i386-linux-gnu.so >building 'h5py.h5g' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5g.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5g.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5a.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5a.cpython-38-i386-linux-gnu.so >building 'h5py.h5l' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5l.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5l.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5f.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5f.cpython-38-i386-linux-gnu.so >building 'h5py.h5o' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5o.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5o.o >h5py/h5l.c: In function â__pyx_pf_4h5py_3h5l_9LinkProxy_12get_valâ: >h5py/h5l.c:4522:107: warning: passing argument 4 of â__pyx_f_4h5py_4defs_H5Lunpack_elink_valâ from incompatible pointer type [-Wincompatible-pointer-types] > 4522 | __pyx_t_1 = __pyx_f_4h5py_4defs_H5Lunpack_elink_val(__pyx_v_buf, __pyx_v_buf_size, (&__pyx_v_wtf), (&__pyx_v_ext_file_name), (&__pyx_v_ext_obj_name)); if (unlikely(__pyx_t_1 == ((herr_t)((herr_t)-1L)))) __PYX_ERR(1, 187, __pyx_L5_error) > | ~^~~~~~~~~~~~~~~~~~~~~~~ > | | > | char ** >h5py/h5l.c:4522:107: note: expected âconst char **â but argument is of type âchar **â >h5py/h5l.c:4522:133: warning: passing argument 5 of â__pyx_f_4h5py_4defs_H5Lunpack_elink_valâ from incompatible pointer type [-Wincompatible-pointer-types] > 4522 | __pyx_t_1 = __pyx_f_4h5py_4defs_H5Lunpack_elink_val(__pyx_v_buf, __pyx_v_buf_size, (&__pyx_v_wtf), (&__pyx_v_ext_file_name), (&__pyx_v_ext_obj_name)); if (unlikely(__pyx_t_1 == ((herr_t)((herr_t)-1L)))) __PYX_ERR(1, 187, __pyx_L5_error) > | ~^~~~~~~~~~~~~~~~~~~~~~ > | | > | char ** >h5py/h5l.c:4522:133: note: expected âconst char **â but argument is of type âchar **â >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5l.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5l.cpython-38-i386-linux-gnu.so >building 'h5py.h5ds' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5ds.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5ds.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5o.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5o.cpython-38-i386-linux-gnu.so >building 'h5py.h5ac' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5ac.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5ac.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5g.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5g.cpython-38-i386-linux-gnu.so >building 'h5py.h5pl' extension >i686-pc-linux-gnu-gcc -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf -I/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/lzf/lzf -I/usr/lib/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5pl.c -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5pl.o >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5p.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5p.cpython-38-i386-linux-gnu.so >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5ds.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5ds.cpython-38-i386-linux-gnu.so >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5pl.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5pl.cpython-38-i386-linux-gnu.so >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5ac.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5ac.cpython-38-i386-linux-gnu.so >i686-pc-linux-gnu-gcc -shared -Wl,-O1 -Wl,--as-needed -O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/temp.linux-i686-3.8/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1/h5py/h5t.o -L/usr/lib -lhdf5 -lhdf5_hl -o /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/h5t.cpython-38-i386-linux-gnu.so >warning: h5py/h5pl.pyx:65:14: cpdef variables will not be supported in Cython 3; currently they are no different from cdef variables >warning: h5py/h5pl.pyx:66:14: cpdef variables will not be supported in Cython 3; currently they are no different from cdef variables >warning: h5py/h5pl.pyx:81:14: cpdef variables will not be supported in Cython 3; currently they are no different from cdef variables > * Using python3.9 in global scope > * python3_9: running distutils-r1_run_phase python_compile_all >>>> Source compiled. >>>> Test phase: dev-python/h5py-3.2.1 > * python3_8: running distutils-r1_run_phase python_test >================================================= test session starts ================================================== >platform linux -- Python 3.8.8, pytest-6.2.2, py-1.10.0, pluggy-0.13.1 -- /usr/bin/python3.8 >cachedir: .pytest_cache >rootdir: /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib >plugins: pkgcore-0.11.5 >collecting ... collected 675 items / 3 deselected / 672 selected > >h5py/tests/test_attribute_create.py::TestArray::test_dtype PASSED [ 0%] >h5py/tests/test_attribute_create.py::TestArray::test_int PASSED [ 0%] >h5py/tests/test_attribute_create.py::TestArray::test_shape PASSED [ 0%] >h5py/tests/test_attribute_create.py::TestArray::test_str PASSED [ 0%] >h5py/tests/test_attribute_create.py::TestArray::test_string_dtype PASSED [ 0%] >h5py/tests/test_attribute_create.py::TestArray::test_tuple_of_unicode PASSED [ 0%] >h5py/tests/test_attrs.py::TestRepr::test_repr PASSED [ 1%] >h5py/tests/test_attrs.py::TestAccess::test_access_exc PASSED [ 1%] >h5py/tests/test_attrs.py::TestAccess::test_create PASSED [ 1%] >h5py/tests/test_attrs.py::TestAccess::test_create_2 PASSED [ 1%] >h5py/tests/test_attrs.py::TestAccess::test_get_id PASSED [ 1%] >h5py/tests/test_attrs.py::TestAccess::test_modify PASSED [ 1%] >h5py/tests/test_attrs.py::TestAccess::test_modify_2 PASSED [ 1%] >h5py/tests/test_attrs.py::TestAccess::test_overwrite PASSED [ 2%] >h5py/tests/test_attrs.py::TestAccess::test_rank PASSED [ 2%] >h5py/tests/test_attrs.py::TestAccess::test_single PASSED [ 2%] >h5py/tests/test_attrs.py::TestDelete::test_delete PASSED [ 2%] >h5py/tests/test_attrs.py::TestDelete::test_delete_exc PASSED [ 2%] >h5py/tests/test_attrs.py::TestUnicode::test_ascii PASSED [ 2%] >h5py/tests/test_attrs.py::TestUnicode::test_raw PASSED [ 2%] >h5py/tests/test_attrs.py::TestUnicode::test_unicode PASSED [ 3%] >h5py/tests/test_attrs.py::TestCreate::test_empty PASSED [ 3%] >h5py/tests/test_attrs.py::TestCreate::test_named PASSED [ 3%] >h5py/tests/test_attrs.py::TestMutableMapping::test_resolution PASSED [ 3%] >h5py/tests/test_attrs.py::TestMutableMapping::test_validity PASSED [ 3%] >h5py/tests/test_attrs.py::TestVlen::test_vlen PASSED [ 3%] >h5py/tests/test_attrs.py::TestVlen::test_vlen_s1 PASSED [ 4%] >h5py/tests/test_attrs.py::TestTrackOrder::test_no_track_order PASSED [ 4%] >h5py/tests/test_attrs.py::TestTrackOrder::test_track_order SKIPPED (HDF5 1.10.6 required) [ 4%] >h5py/tests/test_attrs.py::TestDatatype::test_datatype PASSED [ 4%] >h5py/tests/test_attrs.py::test_python_int_uint64 PASSED [ 4%] >h5py/tests/test_attrs_data.py::TestScalar::test_compound PASSED [ 4%] >h5py/tests/test_attrs_data.py::TestScalar::test_int PASSED [ 4%] >h5py/tests/test_attrs_data.py::TestArray::test_multi PASSED [ 5%] >h5py/tests/test_attrs_data.py::TestArray::test_single PASSED [ 5%] >h5py/tests/test_attrs_data.py::TestTypes::test_bool PASSED [ 5%] >h5py/tests/test_attrs_data.py::TestTypes::test_complex PASSED [ 5%] >h5py/tests/test_attrs_data.py::TestTypes::test_float PASSED [ 5%] >h5py/tests/test_attrs_data.py::TestTypes::test_int PASSED [ 5%] >h5py/tests/test_attrs_data.py::TestTypes::test_string PASSED [ 5%] >h5py/tests/test_attrs_data.py::TestTypes::test_string_scalar PASSED [ 6%] >h5py/tests/test_attrs_data.py::TestTypes::test_unicode_scalar PASSED [ 6%] >h5py/tests/test_attrs_data.py::TestTypes::test_vlen_string_array PASSED [ 6%] >h5py/tests/test_attrs_data.py::TestEmpty::test_items PASSED [ 6%] >h5py/tests/test_attrs_data.py::TestEmpty::test_iteritems PASSED [ 6%] >h5py/tests/test_attrs_data.py::TestEmpty::test_itervalues PASSED [ 6%] >h5py/tests/test_attrs_data.py::TestEmpty::test_modify PASSED [ 6%] >h5py/tests/test_attrs_data.py::TestEmpty::test_read PASSED [ 7%] >h5py/tests/test_attrs_data.py::TestEmpty::test_values PASSED [ 7%] >h5py/tests/test_attrs_data.py::TestEmpty::test_write PASSED [ 7%] >h5py/tests/test_attrs_data.py::TestWriteException::test_write PASSED [ 7%] >h5py/tests/test_base.py::TestName::test_anonymous PASSED [ 7%] >h5py/tests/test_base.py::TestParent::test_object_parent PASSED [ 7%] >h5py/tests/test_base.py::TestMapping::test_items PASSED [ 8%] >h5py/tests/test_base.py::TestMapping::test_keys PASSED [ 8%] >h5py/tests/test_base.py::TestMapping::test_values PASSED [ 8%] >h5py/tests/test_base.py::TestRepr::test_dataset PASSED [ 8%] >h5py/tests/test_base.py::TestRepr::test_empty PASSED [ 8%] >h5py/tests/test_base.py::TestRepr::test_file PASSED [ 8%] >h5py/tests/test_base.py::TestRepr::test_group PASSED [ 8%] >h5py/tests/test_base.py::TestRepr::test_namedtype PASSED [ 9%] >h5py/tests/test_base.py::test_is_hdf5 PASSED [ 9%] >h5py/tests/test_big_endian_file.py::test_vlen_big_endian PASSED [ 9%] >h5py/tests/test_big_endian_file.py::TestEndianess::test_simple_int_be PASSED [ 9%] >h5py/tests/test_completions.py::TestCompletions::test_attrs_completions PASSED [ 9%] >h5py/tests/test_completions.py::TestCompletions::test_group_completions PASSED [ 9%] >h5py/tests/test_dataset.py::TestRepr::test_repr_open 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[ 11%] >h5py/tests/test_dataset.py::TestCreateData::test_create_extended PASSED [ 11%] >h5py/tests/test_dataset.py::TestCreateData::test_create_incompatible_data PASSED [ 12%] >h5py/tests/test_dataset.py::TestCreateData::test_create_np_s PASSED [ 12%] >h5py/tests/test_dataset.py::TestCreateData::test_create_np_u PASSED [ 12%] >h5py/tests/test_dataset.py::TestCreateData::test_create_scalar PASSED [ 12%] >h5py/tests/test_dataset.py::TestCreateData::test_create_strings PASSED [ 12%] >h5py/tests/test_dataset.py::TestCreateData::test_dataset_intermediate_group PASSED [ 12%] >h5py/tests/test_dataset.py::TestCreateData::test_empty_create_via_Empty_class PASSED [ 12%] >h5py/tests/test_dataset.py::TestCreateData::test_empty_create_via_None_shape PASSED [ 13%] >h5py/tests/test_dataset.py::TestCreateData::test_reshape PASSED [ 13%] >h5py/tests/test_dataset.py::TestReadDirectly::test_read_direct[source_shape0-dest_shape0-source_sel0-dest_sel0] PASSED [ 13%] 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27%] >h5py/tests/test_dataset.py::TestCompound::test_assign PASSED [ 27%] >h5py/tests/test_dataset.py::TestCompound::test_fields PASSED [ 27%] >h5py/tests/test_dataset.py::TestCompound::test_rt PASSED [ 28%] >h5py/tests/test_dataset.py::TestSubarray::test_write_array PASSED [ 28%] >h5py/tests/test_dataset.py::TestSubarray::test_write_list PASSED [ 28%] >h5py/tests/test_dataset.py::TestEnum::test_create PASSED [ 28%] >h5py/tests/test_dataset.py::TestEnum::test_readwrite PASSED [ 28%] >h5py/tests/test_dataset.py::TestFloats::test_mini PASSED [ 28%] >h5py/tests/test_dataset.py::TestFloats::test_mini_mapping PASSED [ 29%] >h5py/tests/test_dataset.py::TestTrackTimes::test_disable_track_times PASSED [ 29%] >h5py/tests/test_dataset.py::TestTrackTimes::test_invalid_track_times PASSED [ 29%] >h5py/tests/test_dataset.py::TestZeroShape::test_array_conversion PASSED [ 29%] >h5py/tests/test_dataset.py::TestZeroShape::test_reading PASSED [ 29%] 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39%] >h5py/tests/test_dataset_getitem.py::TestScalarArray::test_fieldnames PASSED [ 39%] >h5py/tests/test_dataset_getitem.py::TestScalarArray::test_index PASSED [ 39%] >h5py/tests/test_dataset_getitem.py::TestScalarArray::test_indexlist PASSED [ 39%] >h5py/tests/test_dataset_getitem.py::TestScalarArray::test_mask PASSED [ 39%] >h5py/tests/test_dataset_getitem.py::TestScalarArray::test_multi_block_slice PASSED [ 39%] >h5py/tests/test_dataset_getitem.py::TestScalarArray::test_nbytes PASSED [ 40%] >h5py/tests/test_dataset_getitem.py::TestScalarArray::test_ndim PASSED [ 40%] >h5py/tests/test_dataset_getitem.py::TestScalarArray::test_shape PASSED [ 40%] >h5py/tests/test_dataset_getitem.py::TestScalarArray::test_size PASSED [ 40%] >h5py/tests/test_dataset_getitem.py::TestScalarArray::test_slice PASSED [ 40%] >h5py/tests/test_dataset_getitem.py::TestScalarArray::test_tuple PASSED [ 40%] >h5py/tests/test_dataset_getitem.py::Test1DZeroFloat::test_ellipsis PASSED [ 40%] >h5py/tests/test_dataset_getitem.py::Test1DZeroFloat::test_fieldnames PASSED [ 41%] >h5py/tests/test_dataset_getitem.py::Test1DZeroFloat::test_index PASSED [ 41%] >h5py/tests/test_dataset_getitem.py::Test1DZeroFloat::test_indexlist PASSED [ 41%] >h5py/tests/test_dataset_getitem.py::Test1DZeroFloat::test_mask PASSED [ 41%] >h5py/tests/test_dataset_getitem.py::Test1DZeroFloat::test_ndim PASSED [ 41%] >h5py/tests/test_dataset_getitem.py::Test1DZeroFloat::test_shape PASSED [ 41%] >h5py/tests/test_dataset_getitem.py::Test1DZeroFloat::test_slice PASSED [ 41%] >h5py/tests/test_dataset_getitem.py::Test1DZeroFloat::test_slice_stop_less_than_start PASSED [ 42%] >h5py/tests/test_dataset_getitem.py::Test1DZeroFloat::test_tuple PASSED [ 42%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_ellipsis PASSED [ 42%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_fieldnames PASSED [ 42%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_index_illegal PASSED [ 42%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_index_neg PASSED [ 42%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_index_none PASSED [ 43%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_index_outofrange PASSED [ 43%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_index_simple PASSED [ 43%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_indexlist_empty PASSED [ 43%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_indexlist_monotonic_negative PASSED [ 43%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_indexlist_nonmonotonic PASSED [ 43%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_indexlist_numpyarray PASSED [ 43%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_indexlist_numpyarray_ellipsis PASSED [ 44%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_indexlist_numpyarray_single_index_ellipsis PASSED [ 44%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_indexlist_outofrange PASSED [ 44%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_indexlist_repeated PASSED [ 44%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_indexlist_simple PASSED [ 44%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_indexlist_single_index_ellipsis PASSED [ 44%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_mask_false PASSED [ 44%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_mask_partial PASSED [ 45%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_mask_true PASSED [ 45%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_mask_wrongsize PASSED [ 45%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_ndim PASSED [ 45%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_shape PASSED [ 45%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_slice_backwards PASSED [ 45%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_slice_negindexes PASSED [ 45%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_slice_outofrange PASSED [ 46%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_slice_simple PASSED [ 46%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_slice_stop_less_than_start PASSED [ 46%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_slice_strides PASSED [ 46%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_slice_zerosize PASSED [ 46%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_slice_zerostride PASSED [ 46%] >h5py/tests/test_dataset_getitem.py::Test1DFloat::test_tuple PASSED [ 47%] >h5py/tests/test_dataset_getitem.py::Test2DZeroFloat::test_indexlist PASSED [ 47%] >h5py/tests/test_dataset_getitem.py::Test2DZeroFloat::test_ndim PASSED [ 47%] >h5py/tests/test_dataset_getitem.py::Test2DZeroFloat::test_shape PASSED [ 47%] >h5py/tests/test_dataset_getitem.py::Test2DFloat::test_index_emptylist PASSED [ 47%] >h5py/tests/test_dataset_getitem.py::Test2DFloat::test_indexlist PASSED [ 47%] >h5py/tests/test_dataset_getitem.py::Test2DFloat::test_nbytes PASSED [ 47%] >h5py/tests/test_dataset_getitem.py::Test2DFloat::test_ndim PASSED [ 48%] >h5py/tests/test_dataset_getitem.py::Test2DFloat::test_shape PASSED [ 48%] >h5py/tests/test_dataset_getitem.py::Test2DFloat::test_size PASSED [ 48%] >h5py/tests/test_dataset_getitem.py::TestVeryLargeArray::test_size SKIPPED (Maximum integer size >= 2**31 req...) [ 48%] >h5py/tests/test_dataset_swmr.py::TestSwmrNotAvailable::test_flush_raises SKIPPED (SWMR is available. Skippin...) [ 48%] >h5py/tests/test_dataset_swmr.py::TestSwmrNotAvailable::test_open_swmr_raises SKIPPED (SWMR is available. Ski...) [ 48%] >h5py/tests/test_dataset_swmr.py::TestSwmrNotAvailable::test_refresh_raises SKIPPED (SWMR is available. Skipp...) [ 48%] >h5py/tests/test_dataset_swmr.py::TestSwmrNotAvailable::test_set_swmr_mode_raises SKIPPED (SWMR is available....) [ 49%] >h5py/tests/test_dataset_swmr.py::TestSwmrNotAvailable::test_swmr_mode_false SKIPPED (SWMR is available. Skip...) [ 49%] >h5py/tests/test_dataset_swmr.py::TestDatasetSwmrRead::test_force_swmr_mode_off_raises PASSED [ 49%] >h5py/tests/test_dataset_swmr.py::TestDatasetSwmrRead::test_force_swmr_mode_on_raises PASSED [ 49%] >h5py/tests/test_dataset_swmr.py::TestDatasetSwmrRead::test_initial_swmr_mode_on PASSED [ 49%] >h5py/tests/test_dataset_swmr.py::TestDatasetSwmrRead::test_read_data PASSED [ 49%] >h5py/tests/test_dataset_swmr.py::TestDatasetSwmrRead::test_refresh PASSED [ 50%] >h5py/tests/test_dataset_swmr.py::TestDatasetSwmrWrite::test_extend_dset PASSED [ 50%] >h5py/tests/test_dataset_swmr.py::TestDatasetSwmrWrite::test_extend_dset_multiple PASSED [ 50%] >h5py/tests/test_dataset_swmr.py::TestDatasetSwmrWrite::test_initial_swmr_mode_off PASSED [ 50%] >h5py/tests/test_dataset_swmr.py::TestDatasetSwmrWrite::test_switch_swmr_mode_off_raises PASSED [ 50%] >h5py/tests/test_dataset_swmr.py::TestDatasetSwmrWrite::test_switch_swmr_mode_on PASSED [ 50%] >h5py/tests/test_datatype.py::TestCreation::test_appropriate_low_level_id PASSED [ 50%] >h5py/tests/test_datatype.py::TestCreation::test_repr PASSED [ 51%] >h5py/tests/test_dimension_scales.py::TestH5DSBindings::test_attach_dimensionscale PASSED [ 51%] >h5py/tests/test_dimension_scales.py::TestH5DSBindings::test_create_dimensionscale PASSED [ 51%] >h5py/tests/test_dimension_scales.py::TestH5DSBindings::test_detach_dimensionscale PASSED [ 51%] >h5py/tests/test_dimension_scales.py::TestH5DSBindings::test_iter_dimensionscales PASSED [ 51%] >h5py/tests/test_dimension_scales.py::TestH5DSBindings::test_label_dimensionscale SKIPPED (Reading non-existe...) [ 51%] >h5py/tests/test_dimension_scales.py::TestDimensionManager::test_get_dimension PASSED [ 51%] >h5py/tests/test_dimension_scales.py::TestDimensionManager::test_iter PASSED [ 52%] >h5py/tests/test_dimension_scales.py::TestDimensionManager::test_len PASSED [ 52%] >h5py/tests/test_dimension_scales.py::TestDimensionManager::test_make_scale PASSED [ 52%] >h5py/tests/test_dimension_scales.py::TestDimensionManager::test_repr PASSED [ 52%] >h5py/tests/test_dimension_scales.py::TestDimensionsHighLevel::test_attach_scale PASSED [ 52%] >h5py/tests/test_dimension_scales.py::TestDimensionsHighLevel::test_attributes PASSED [ 52%] >h5py/tests/test_dimension_scales.py::TestDimensionsHighLevel::test_detach_scale PASSED [ 52%] >h5py/tests/test_dimension_scales.py::TestDimensionsHighLevel::test_get_dimension_scale PASSED [ 53%] >h5py/tests/test_dimension_scales.py::TestDimensionsHighLevel::test_get_items PASSED [ 53%] >h5py/tests/test_dimension_scales.py::TestDimensionsHighLevel::test_get_keys PASSED [ 53%] >h5py/tests/test_dimension_scales.py::TestDimensionsHighLevel::test_get_label PASSED [ 53%] >h5py/tests/test_dimension_scales.py::TestDimensionsHighLevel::test_get_values PASSED [ 53%] >h5py/tests/test_dimension_scales.py::TestDimensionsHighLevel::test_iter PASSED [ 53%] >h5py/tests/test_dimension_scales.py::TestDimensionsHighLevel::test_len PASSED [ 54%] >h5py/tests/test_dimension_scales.py::TestDimensionsHighLevel::test_repr PASSED [ 54%] >h5py/tests/test_dimension_scales.py::TestDimensionsHighLevel::test_set_label PASSED [ 54%] >h5py/tests/test_dims_dimensionproxy.py::TestItems::test_empty PASSED [ 54%] >h5py/tests/test_dtype.py::TestVlen::test_compound PASSED [ 54%] >h5py/tests/test_dtype.py::TestVlen::test_compound_vlen_bool PASSED [ 54%] >h5py/tests/test_dtype.py::TestVlen::test_compound_vlen_enum PASSED [ 54%] >h5py/tests/test_dtype.py::TestVlen::test_vlen_enum PASSED [ 55%] >h5py/tests/test_dtype.py::TestEmptyVlen::test_write_empty_vlen PASSED [ 55%] >h5py/tests/test_dtype.py::TestExplicitCast::test_f2_casting PASSED [ 55%] >h5py/tests/test_dtype.py::TestOffsets::test_aligned_data PASSED [ 55%] >h5py/tests/test_dtype.py::TestOffsets::test_aligned_offsets PASSED [ 55%] >h5py/tests/test_dtype.py::TestOffsets::test_compound_robustness PASSED [ 55%] >h5py/tests/test_dtype.py::TestOffsets::test_compound_vlen PASSED [ 55%] >h5py/tests/test_dtype.py::TestOffsets::test_float_round_tripping FAILED [ 56%] >h5py/tests/test_dtype.py::TestOffsets::test_out_of_order_offsets PASSED [ 56%] >h5py/tests/test_dtype.py::TestStrings::test_fixed_ascii PASSED [ 56%] >h5py/tests/test_dtype.py::TestStrings::test_fixed_utf8 PASSED [ 56%] >h5py/tests/test_dtype.py::TestStrings::test_vlen_ascii PASSED [ 56%] >h5py/tests/test_dtype.py::TestStrings::test_vlen_utf8 PASSED [ 56%] >h5py/tests/test_dtype.py::TestDateTime::test_datetime PASSED [ 56%] >h5py/tests/test_dtype.py::TestDateTime::test_timedelta PASSED [ 57%] >h5py/tests/test_dtype.py::TestB8::test_b8_bool SKIPPED (tables is required) [ 57%] >h5py/tests/test_dtype.py::TestB8::test_b8_bool_array SKIPPED (tables is required) [ 57%] >h5py/tests/test_dtype.py::TestB8::test_b8_bool_compound SKIPPED (tables is required) [ 57%] >h5py/tests/test_dtype.py::TestB8::test_b8_bool_compound_nested SKIPPED (tables is required) [ 57%] >h5py/tests/test_dtype.py::test_opaque PASSED [ 57%] >h5py/tests/test_errors.py::test_unsilence_errors PASSED [ 58%] >h5py/tests/test_errors.py::test_thread_hdf5_silence_error_membership PASSED [ 58%] >h5py/tests/test_errors.py::test_thread_hdf5_silence_error_attr PASSED [ 58%] >h5py/tests/test_file.py::TestFileOpen::test_append PASSED [ 58%] >h5py/tests/test_file.py::TestFileOpen::test_create PASSED [ 58%] >h5py/tests/test_file.py::TestFileOpen::test_create_exclusive PASSED [ 58%] >h5py/tests/test_file.py::TestFileOpen::test_default PASSED [ 58%] >h5py/tests/test_file.py::TestFileOpen::test_invalid_mode PASSED [ 59%] >h5py/tests/test_file.py::TestFileOpen::test_nonexistent_file PASSED [ 59%] >h5py/tests/test_file.py::TestFileOpen::test_readonly PASSED [ 59%] >h5py/tests/test_file.py::TestFileOpen::test_readwrite PASSED [ 59%] >h5py/tests/test_file.py::TestSpaceStrategy::test_create_with_space_strategy PASSED [ 59%] >h5py/tests/test_file.py::TestModes::test_mode_attr PASSED [ 59%] >h5py/tests/test_file.py::TestModes::test_mode_external PASSED [ 59%] >h5py/tests/test_file.py::TestDrivers::test_backing PASSED [ 60%] >h5py/tests/test_file.py::TestDrivers::test_blocksize PASSED [ 60%] >h5py/tests/test_file.py::TestDrivers::test_core PASSED [ 60%] >h5py/tests/test_file.py::TestDrivers::test_fileobj PASSED [ 60%] >h5py/tests/test_file.py::TestDrivers::test_readonly PASSED [ 60%] >h5py/tests/test_file.py::TestDrivers::test_sec2 PASSED [ 60%] >h5py/tests/test_file.py::TestDrivers::test_split PASSED [ 61%] >h5py/tests/test_file.py::TestDrivers::test_stdio PASSED [ 61%] >h5py/tests/test_file.py::TestLibver::test_default SKIPPED (Requires HDF5 before 1.10.2) [ 61%] >h5py/tests/test_file.py::TestLibver::test_multiple SKIPPED (Requires HDF5 before 1.10.2) [ 61%] >h5py/tests/test_file.py::TestLibver::test_none SKIPPED (Requires HDF5 before 1.10.2) [ 61%] >h5py/tests/test_file.py::TestLibver::test_single SKIPPED (Requires HDF5 before 1.10.2) [ 61%] >h5py/tests/test_file.py::TestNewLibver::test_default PASSED [ 61%] >h5py/tests/test_file.py::TestNewLibver::test_multiple PASSED [ 62%] >h5py/tests/test_file.py::TestNewLibver::test_none PASSED [ 62%] >h5py/tests/test_file.py::TestNewLibver::test_single PASSED [ 62%] >h5py/tests/test_file.py::TestNewLibver::test_single_v108 PASSED [ 62%] >h5py/tests/test_file.py::TestNewLibver::test_single_v110 PASSED [ 62%] >h5py/tests/test_file.py::TestNewLibver::test_single_v112 SKIPPED (Requires HDF5 1.11.4 or later) [ 62%] >h5py/tests/test_file.py::TestUserblock::test_create_blocksize PASSED [ 62%] >h5py/tests/test_file.py::TestUserblock::test_match_existing PASSED [ 63%] >h5py/tests/test_file.py::TestUserblock::test_power_of_two PASSED [ 63%] >h5py/tests/test_file.py::TestUserblock::test_write_block PASSED [ 63%] >h5py/tests/test_file.py::TestUserblock::test_write_only PASSED [ 63%] >h5py/tests/test_file.py::TestContextManager::test_context_manager PASSED [ 63%] >h5py/tests/test_file.py::TestUnicode::test_nonexistent_file_unicode PASSED [ 63%] >h5py/tests/test_file.py::TestUnicode::test_unicode PASSED [ 63%] >h5py/tests/test_file.py::TestUnicode::test_unicode_hdf5_python_consistent PASSED [ 64%] >h5py/tests/test_file.py::TestFileProperty::test_close PASSED [ 64%] >h5py/tests/test_file.py::TestFileProperty::test_mode PASSED [ 64%] >h5py/tests/test_file.py::TestFileProperty::test_property PASSED [ 64%] >h5py/tests/test_file.py::TestClose::test_close PASSED [ 64%] >h5py/tests/test_file.py::TestClose::test_close_multiple_default_driver PASSED [ 64%] >h5py/tests/test_file.py::TestClose::test_closed_file PASSED [ 65%] >h5py/tests/test_file.py::TestFlush::test_flush PASSED [ 65%] >h5py/tests/test_file.py::TestRepr::test_repr PASSED [ 65%] >h5py/tests/test_file.py::TestFilename::test_filename PASSED [ 65%] >h5py/tests/test_file.py::TestCloseInvalidatesOpenObjectIDs::test_close PASSED [ 65%] >h5py/tests/test_file.py::TestPathlibSupport::test_pathlib_accepted_file PASSED [ 65%] >h5py/tests/test_file.py::TestPathlibSupport::test_pathlib_name_match PASSED [ 65%] >h5py/tests/test_file.py::TestPickle::test_dump_error PASSED [ 66%] >h5py/tests/test_file.py::TestSWMRMode::test_file_mode_generalizes PASSED [ 66%] >h5py/tests/test_file.py::TestSWMRMode::test_swmr_mode_consistency PASSED [ 66%] >h5py/tests/test_file.py::TestROS3::test_ros3 SKIPPED (ros3 file operations were added in HDF5 1.10.6+) [ 66%] >h5py/tests/test_file2.py::TestDealloc::test_autoclose PASSED [ 66%] >h5py/tests/test_file2.py::TestDriverRegistration::test_register_driver PASSED [ 66%] >h5py/tests/test_file2.py::TestDriverRegistration::test_unregister_driver PASSED [ 66%] >h5py/tests/test_file2.py::TestCache::test_defaults PASSED [ 67%] >h5py/tests/test_file2.py::TestCache::test_nbytes PASSED [ 67%] >h5py/tests/test_file2.py::TestCache::test_nslots PASSED [ 67%] >h5py/tests/test_file2.py::TestCache::test_w0 PASSED [ 67%] >h5py/tests/test_file2.py::TestFileObj::test_BytesIO PASSED [ 67%] >h5py/tests/test_file2.py::TestFileObj::test_TemporaryFile PASSED [ 67%] >h5py/tests/test_file2.py::TestFileObj::test_exception_close SKIPPED (Incompletely closed files can cause seg...) [ 68%] >h5py/tests/test_file2.py::TestFileObj::test_exception_open PASSED [ 68%] >h5py/tests/test_file2.py::TestFileObj::test_exception_read PASSED [ 68%] >h5py/tests/test_file2.py::TestFileObj::test_exception_write PASSED [ 68%] >h5py/tests/test_file2.py::TestFileObj::test_exception_writeonly PASSED [ 68%] >h5py/tests/test_file2.py::TestFileObj::test_file PASSED [ 68%] >h5py/tests/test_file2.py::TestFileObj::test_method_vanish PASSED [ 68%] >h5py/tests/test_file2.py::TestTrackOrder::test_no_track_order PASSED [ 69%] >h5py/tests/test_file2.py::TestTrackOrder::test_track_order PASSED [ 69%] >h5py/tests/test_file_image.py::TestFileImage::test_load_from_image PASSED [ 69%] >h5py/tests/test_file_image.py::TestFileImage::test_open_from_image PASSED [ 69%] >h5py/tests/test_filters.py::TestFilters::test_wr_scaleoffset_fletcher32 PASSED [ 69%] >h5py/tests/test_filters.py::TestFilters::test_wr_szip_fletcher32_64bit SKIPPED (szip filter required) [ 69%] >h5py/tests/test_filters.py::test_filter_ref_obj PASSED [ 69%] >h5py/tests/test_filters.py::test_unregister_filter PASSED [ 70%] >h5py/tests/test_filters.py::test_filters_available SKIPPED (H5PY_TEST_CHECK_FILTERS not set) [ 70%] >h5py/tests/test_group.py::TestCreate::test_appropriate_low_level_id PASSED [ 70%] >h5py/tests/test_group.py::TestCreate::test_create PASSED [ 70%] >h5py/tests/test_group.py::TestCreate::test_create_exception PASSED [ 70%] >h5py/tests/test_group.py::TestCreate::test_create_intermediate PASSED [ 70%] >h5py/tests/test_group.py::TestCreate::test_unicode PASSED [ 70%] >h5py/tests/test_group.py::TestCreate::test_unicode_default PASSED [ 71%] >h5py/tests/test_group.py::TestDatasetAssignment::test_name_bytes PASSED [ 71%] >h5py/tests/test_group.py::TestDatasetAssignment::test_ndarray PASSED [ 71%] >h5py/tests/test_group.py::TestDtypeAssignment::test_dtype PASSED [ 71%] >h5py/tests/test_group.py::TestDtypeAssignment::test_name_bytes PASSED [ 71%] >h5py/tests/test_group.py::TestRequire::test_create PASSED [ 71%] >h5py/tests/test_group.py::TestRequire::test_intermediate_create_dataset PASSED [ 72%] >h5py/tests/test_group.py::TestRequire::test_intermediate_create_group PASSED [ 72%] >h5py/tests/test_group.py::TestRequire::test_open_existing PASSED [ 72%] >h5py/tests/test_group.py::TestRequire::test_require_exception PASSED [ 72%] >h5py/tests/test_group.py::TestDelete::test_delete PASSED [ 72%] >h5py/tests/test_group.py::TestDelete::test_nonexisting PASSED [ 72%] >h5py/tests/test_group.py::TestDelete::test_readonly_delete_exception PASSED [ 72%] >h5py/tests/test_group.py::TestOpen::test_invalid_ref PASSED [ 73%] >h5py/tests/test_group.py::TestOpen::test_nonexistent PASSED [ 73%] >h5py/tests/test_group.py::TestOpen::test_open PASSED [ 73%] >h5py/tests/test_group.py::TestOpen::test_reference PASSED [ 73%] >h5py/tests/test_group.py::TestOpen::test_reference_numpyobj PASSED [ 73%] >h5py/tests/test_group.py::TestRepr::test_repr PASSED [ 73%] >h5py/tests/test_group.py::TestLen::test_len PASSED [ 73%] >h5py/tests/test_group.py::TestContains::test_contains PASSED [ 74%] >h5py/tests/test_group.py::TestContains::test_dot PASSED [ 74%] >h5py/tests/test_group.py::TestContains::test_empty PASSED [ 74%] >h5py/tests/test_group.py::TestContains::test_exc PASSED [ 74%] >h5py/tests/test_group.py::TestContains::test_oddball_paths PASSED [ 74%] >h5py/tests/test_group.py::TestContains::test_root PASSED [ 74%] >h5py/tests/test_group.py::TestContains::test_softlinks PASSED [ 75%] >h5py/tests/test_group.py::TestContains::test_trailing_slash PASSED [ 75%] >h5py/tests/test_group.py::TestIter::test_iter PASSED [ 75%] >h5py/tests/test_group.py::TestIter::test_iter_zero PASSED [ 75%] >h5py/tests/test_group.py::TestTrackOrder::test_no_track_order PASSED [ 75%] >h5py/tests/test_group.py::TestTrackOrder::test_track_order PASSED [ 75%] >h5py/tests/test_group.py::TestPy3Dict::test_items PASSED [ 75%] >h5py/tests/test_group.py::TestPy3Dict::test_keys PASSED [ 76%] >h5py/tests/test_group.py::TestPy3Dict::test_values PASSED [ 76%] >h5py/tests/test_group.py::TestAdditionalMappingFuncs::test_clear PASSED [ 76%] >h5py/tests/test_group.py::TestAdditionalMappingFuncs::test_pop PASSED [ 76%] >h5py/tests/test_group.py::TestAdditionalMappingFuncs::test_pop_default PASSED [ 76%] >h5py/tests/test_group.py::TestAdditionalMappingFuncs::test_pop_item PASSED [ 76%] >h5py/tests/test_group.py::TestAdditionalMappingFuncs::test_pop_raises PASSED [ 76%] >h5py/tests/test_group.py::TestAdditionalMappingFuncs::test_setdefault PASSED [ 77%] >h5py/tests/test_group.py::TestAdditionalMappingFuncs::test_setdefault_no_default PASSED [ 77%] >h5py/tests/test_group.py::TestAdditionalMappingFuncs::test_setdefault_with_default PASSED [ 77%] >h5py/tests/test_group.py::TestAdditionalMappingFuncs::test_update_dict PASSED [ 77%] >h5py/tests/test_group.py::TestAdditionalMappingFuncs::test_update_iter PASSED [ 77%] >h5py/tests/test_group.py::TestAdditionalMappingFuncs::test_update_kwargs PASSED [ 77%] >h5py/tests/test_group.py::TestGet::test_get_class PASSED [ 77%] >h5py/tests/test_group.py::TestGet::test_get_default PASSED [ 78%] >h5py/tests/test_group.py::TestGet::test_get_link PASSED [ 78%] >h5py/tests/test_group.py::TestGet::test_get_link_class PASSED [ 78%] >h5py/tests/test_group.py::TestVisit::test_bailout PASSED [ 78%] >h5py/tests/test_group.py::TestVisit::test_visit PASSED [ 78%] >h5py/tests/test_group.py::TestVisit::test_visititems PASSED [ 78%] >h5py/tests/test_group.py::TestSoftLinks::test_create PASSED [ 79%] >h5py/tests/test_group.py::TestSoftLinks::test_exc PASSED [ 79%] >h5py/tests/test_group.py::TestSoftLinks::test_spath PASSED [ 79%] >h5py/tests/test_group.py::TestSoftLinks::test_srepr PASSED [ 79%] >h5py/tests/test_group.py::TestExternalLinks::test_close_file PASSED [ 79%] >h5py/tests/test_group.py::TestExternalLinks::test_create PASSED [ 79%] 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>h5py/tests/test_group.py::TestCopy::test_copy_path_to_path PASSED [ 81%] >h5py/tests/test_group.py::TestCopy::test_copy_refs PASSED [ 81%] >h5py/tests/test_group.py::TestCopy::test_copy_shallow PASSED [ 82%] >h5py/tests/test_group.py::TestCopy::test_copy_soft_links PASSED [ 82%] >h5py/tests/test_group.py::TestCopy::test_copy_without_attributes PASSED [ 82%] >h5py/tests/test_group.py::TestMove::test_move_conflict PASSED [ 82%] >h5py/tests/test_group.py::TestMove::test_move_hardlink PASSED [ 82%] >h5py/tests/test_group.py::TestMove::test_move_softlink PASSED [ 82%] >h5py/tests/test_group.py::TestMove::test_short_circuit PASSED [ 83%] >h5py/tests/test_group.py::TestMutableMapping::test_resolution PASSED [ 83%] >h5py/tests/test_group.py::TestMutableMapping::test_validity PASSED [ 83%] >h5py/tests/test_h5.py::TestH5::test_cnames_get PASSED [ 83%] >h5py/tests/test_h5.py::TestH5::test_cnames_set PASSED [ 83%] >h5py/tests/test_h5.py::TestH5::test_cnames_set_exc PASSED [ 83%] 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>h5py/tests/test_slicing.py::TestMultiBlockSlice::test_stride_zero_error PASSED [ 95%] >h5py/tests/test_slicing.py::TestMultiBlockSlice::test_zero_count_calculated_error PASSED [ 95%] >h5py/tests/test_vds/test_highlevel_vds.py::TestEigerHighLevel::test_eiger_high_level PASSED [ 95%] >h5py/tests/test_vds/test_highlevel_vds.py::TestExcaliburHighLevel::test_excalibur_high_level PASSED [ 95%] >h5py/tests/test_vds/test_highlevel_vds.py::TestPercivalHighLevel::test_percival_high_level PASSED [ 95%] >h5py/tests/test_vds/test_highlevel_vds.py::TestPercivalHighLevel::test_percival_source_from_dataset PASSED [ 95%] >h5py/tests/test_vds/test_highlevel_vds.py::SlicingTestCase::test_inspection PASSED [ 96%] >h5py/tests/test_vds/test_highlevel_vds.py::SlicingTestCase::test_slice_source PASSED [ 96%] >h5py/tests/test_vds/test_highlevel_vds.py::IndexingTestCase::test_index_layout PASSED [ 96%] >h5py/tests/test_vds/test_highlevel_vds.py::RelativeLinkTestCase::test_relative_vds PASSED [ 96%] 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>h5py/tests/test_vds/test_virtual_source.py::TestVirtualSource::test_ellipsis_start PASSED [ 98%] >h5py/tests/test_vds/test_virtual_source.py::TestVirtualSource::test_extra_args PASSED [ 98%] >h5py/tests/test_vds/test_virtual_source.py::TestVirtualSource::test_full_slice PASSED [ 98%] >h5py/tests/test_vds/test_virtual_source.py::TestVirtualSource::test_integer_indexed PASSED [ 98%] >h5py/tests/test_vds/test_virtual_source.py::TestVirtualSource::test_integer_maxshape PASSED [ 98%] >h5py/tests/test_vds/test_virtual_source.py::TestVirtualSource::test_integer_shape PASSED [ 98%] >h5py/tests/test_vds/test_virtual_source.py::TestVirtualSource::test_integer_single_indexed PASSED [ 99%] >h5py/tests/test_vds/test_virtual_source.py::TestVirtualSource::test_negative_start_and_stop_index PASSED [ 99%] >h5py/tests/test_vds/test_virtual_source.py::TestVirtualSource::test_negative_start_index PASSED [ 99%] >h5py/tests/test_vds/test_virtual_source.py::TestVirtualSource::test_negative_stop_index PASSED [ 99%] >h5py/tests/test_vds/test_virtual_source.py::TestVirtualSource::test_shape_calculation_positive_step PASSED [ 99%] >h5py/tests/test_vds/test_virtual_source.py::TestVirtualSource::test_single_range PASSED [ 99%] >h5py/tests/test_vds/test_virtual_source.py::TestVirtualSource::test_two_integer_indexed PASSED [100%] > >======================================================= FAILURES ======================================================= >________________________________________ TestOffsets.test_float_round_tripping _________________________________________ > >self = <h5py.tests.test_dtype.TestOffsets testMethod=test_float_round_tripping> > > def test_float_round_tripping(self): > dtypes = set(f for f in np.typeDict.values() > if (np.issubdtype(f, np.floating) or > np.issubdtype(f, np.complexfloating))) > > if platform.machine() in UNSUPPORTED_LONG_DOUBLE: >> dtype_dset_map = {str(j): d > for j, d in enumerate(dtypes) > if d not in (np.float128, np.complex256)} > >h5py/tests/test_dtype.py:293: >_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ >h5py/tests/test_dtype.py:295: in <dictcomp> > if d not in (np.float128, np.complex256)} >_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ > >attr = 'float128' > > def __getattr__(attr): > if attr == 'testing': > import numpy.testing as testing > return testing > elif attr == 'Tester': > from .testing import Tester > return Tester > else: >> raise AttributeError("module {!r} has no attribute " > "{!r}".format(__name__, attr)) >E AttributeError: module 'numpy' has no attribute 'float128' > >/usr/lib/python3.8/site-packages/numpy/__init__.py:214: AttributeError >=================================================== warnings summary =================================================== >h5py/tests/test_file.py:723 > /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/test_file.py:723: PytestUnknownMarkWarning: Unknown pytest.mark.mpi - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/mark.html > @pytest.mark.mpi > >h5py/tests/test_filters.py:83 > /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/test_filters.py:83: PytestUnknownMarkWarning: Unknown pytest.mark.mpi_skip - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/mark.html > @pytest.mark.mpi_skip > >h5py/tests/test_h5pl.py:23 > /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/test_h5pl.py:23: PytestUnknownMarkWarning: Unknown pytest.mark.mpi_skip - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/mark.html > @pytest.mark.mpi_skip > >h5py/tests/test_h5pl.py:31 > /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/test_h5pl.py:31: PytestUnknownMarkWarning: Unknown pytest.mark.mpi_skip - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/mark.html > @pytest.mark.mpi_skip > >h5py/tests/test_h5pl.py:41 > /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/test_h5pl.py:41: PytestUnknownMarkWarning: Unknown pytest.mark.mpi_skip - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/mark.html > @pytest.mark.mpi_skip > >h5py/tests/test_h5pl.py:51 > /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/test_h5pl.py:51: PytestUnknownMarkWarning: Unknown pytest.mark.mpi_skip - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/mark.html > @pytest.mark.mpi_skip > >h5py/tests/test_h5pl.py:61 > /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/test_h5pl.py:61: PytestUnknownMarkWarning: Unknown pytest.mark.mpi_skip - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/mark.html > @pytest.mark.mpi_skip > >h5py/tests/test_h5pl.py:70 > /var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib/h5py/tests/test_h5pl.py:70: PytestUnknownMarkWarning: Unknown pytest.mark.mpi_skip - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/mark.html > @pytest.mark.mpi_skip > >-- Docs: https://docs.pytest.org/en/stable/warnings.html >=============================================== short test summary info ================================================ >FAILED h5py/tests/test_dtype.py::TestOffsets::test_float_round_tripping - AttributeError: module 'numpy' has no attri... >========================= 1 failed, 647 passed, 24 skipped, 3 deselected, 8 warnings in 8.64s ========================== > * ERROR: dev-python/h5py-3.2.1::gentoo failed (test phase): > * Tests failed with python3.8 > * > * Call stack: > * ebuild.sh, line 125: Called src_test > * environment, line 3258: Called distutils-r1_src_test > * environment, line 1329: Called _distutils-r1_run_foreach_impl 'python_test' > * environment, line 444: Called python_foreach_impl 'distutils-r1_run_phase' 'python_test' > * environment, line 2821: Called multibuild_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_test' > * environment, line 2324: Called _multibuild_run '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_test' > * environment, line 2322: Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_test' > * environment, line 800: Called distutils-r1_run_phase 'python_test' > * environment, line 1268: Called python_test > * environment, line 3117: Called die > * The specific snippet of code: > * pytest -vv -m "not mpi" || die "Tests failed with ${EPYTHON}"; > * > * If you need support, post the output of `emerge --info '=dev-python/h5py-3.2.1::gentoo'`, > * the complete build log and the output of `emerge -pqv '=dev-python/h5py-3.2.1::gentoo'`. > * The complete build log is located at '/var/log/portage/dev-python:h5py-3.2.1:20210411-195044.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/dev-python/h5py-3.2.1/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/dev-python/h5py-3.2.1/temp/environment'. > * Working directory: '/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1-python3_8/lib' > * S: '/var/tmp/portage/dev-python/h5py-3.2.1/work/h5py-3.2.1'
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