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Gentoo's Bugzilla – Attachment 673714 Details for
Bug 755785
[science overlay] sci-biology/tagdust-20101028 : fails to build with -fno-common or gcc-10
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sci-biology:tagdust-20101028:20201120-054218.log
sci-biology:tagdust-20101028:20201120-054218.log (text/plain), 4.67 KB, created by
Toralf Förster
on 2020-11-20 15:56:04 UTC
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Description:
sci-biology:tagdust-20101028:20201120-054218.log
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Creator:
Toralf Förster
Created:
2020-11-20 15:56:04 UTC
Size:
4.67 KB
patch
obsolete
> * Package: sci-biology/tagdust-20101028 > * Repository: science > * Maintainer: mmokrejs@fold.natur.cuni.cz sci-biology@gentoo.org > * USE: abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU > * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox >>>> Unpacking source... >>>> Unpacking tagdust.tgz to /var/tmp/portage/sci-biology/tagdust-20101028/work >>>> Source unpacked in /var/tmp/portage/sci-biology/tagdust-20101028/work >>>> Preparing source in /var/tmp/portage/sci-biology/tagdust-20101028/work/tagdust ... >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-biology/tagdust-20101028/work/tagdust ... >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-biology/tagdust-20101028/work/tagdust ... >make -j1 >gcc -O2 -pipe -march=native -fno-diagnostics-color -c input.c >gcc -O2 -pipe -march=native -fno-diagnostics-color -c interface.c >gcc -O2 -pipe -march=native -fno-diagnostics-color -c main.c >main.c: In function âinit_nuc_codeâ: >main.c:110:15: warning: iteration 255 invokes undefined behavior [-Waggressive-loop-optimizations] > 110 | nuc_code[i] = 0; > | ~~~~~~~~~~~~^~~ >main.c:109:2: note: within this loop > 109 | for(i = 0;i < 256;i++){ > | ^~~ >main.c:110:15: warning: â__builtin_memsetâ writing 1024 bytes into a region of size 1020 overflows the destination [-Wstringop-overflow=] > 110 | nuc_code[i] = 0; > | ~~~~~~~~~~~~^~~ >gcc -O2 -pipe -march=native -fno-diagnostics-color -c rand.c >gcc -O2 -pipe -march=native -fno-diagnostics-color -c test_sequence.c >gcc -O2 -pipe -march=native -fno-diagnostics-color -c background.c >gcc -O2 -pipe -march=native -fno-diagnostics-color -lpthread input.o interface.o main.o rand.o test_sequence.o background.o -o tagdust >/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: interface.o:(.bss+0x0): multiple definition of `linewrap'; input.o:(.bss+0x0): first defined here >/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: interface.o:(.bss+0x8): multiple definition of `seed'; input.o:(.bss+0x8): first defined here >/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: interface.o:(.bss+0x20): multiple definition of `nuc_code'; input.o:(.bss+0x20): first defined here >/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: main.o:(.bss+0x20): multiple definition of `nuc_code'; input.o:(.bss+0x20): first defined here >/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: main.o:(.bss+0x8): multiple definition of `seed'; input.o:(.bss+0x8): first defined here >/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: main.o:(.bss+0x0): multiple definition of `linewrap'; input.o:(.bss+0x0): first defined here >/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: test_sequence.o:(.bss+0x0): multiple definition of `linewrap'; input.o:(.bss+0x0): first defined here >/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: test_sequence.o:(.bss+0x8): multiple definition of `seed'; input.o:(.bss+0x8): first defined here >/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: test_sequence.o:(.bss+0x20): multiple definition of `nuc_code'; input.o:(.bss+0x20): first defined here >/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: background.o:(.bss+0x8): multiple definition of `seed'; input.o:(.bss+0x8): first defined here >/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: background.o:(.bss+0x20): multiple definition of `nuc_code'; input.o:(.bss+0x20): first defined here >/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: background.o:(.bss+0x0): multiple definition of `linewrap'; input.o:(.bss+0x0): first defined here >collect2: error: ld returned 1 exit status >make: *** [Makefile:20: all] Error 1 > * ERROR: sci-biology/tagdust-20101028::science failed (compile phase): > * emake failed > * > * If you need support, post the output of `emerge --info '=sci-biology/tagdust-20101028::science'`, > * the complete build log and the output of `emerge -pqv '=sci-biology/tagdust-20101028::science'`. > * The complete build log is located at '/var/log/portage/sci-biology:tagdust-20101028:20201120-054218.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-biology/tagdust-20101028/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/sci-biology/tagdust-20101028/temp/environment'. > * Working directory: '/var/tmp/portage/sci-biology/tagdust-20101028/work/tagdust' > * S: '/var/tmp/portage/sci-biology/tagdust-20101028/work/tagdust'
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