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Gentoo's Bugzilla – Attachment 629240 Details for
Bug 715956
sci-chemistry/votca-xtp-1.6_rc1 : CMake Error at /.../FindPackageHandleStandardArgs.cmake:164 (message):
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sci-chemistry:votca-xtp-1.6_rc1:20200402-210108.log
sci-chemistry:votca-xtp-1.6_rc1:20200402-210108.log (text/plain), 4.10 KB, created by
Toralf Förster
on 2020-04-02 21:11:23 UTC
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Description:
sci-chemistry:votca-xtp-1.6_rc1:20200402-210108.log
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Creator:
Toralf Förster
Created:
2020-04-02 21:11:23 UTC
Size:
4.10 KB
patch
obsolete
> * Package: sci-chemistry/votca-xtp-1.6_rc1 > * Repository: gentoo > * Maintainer: junghans@gentoo.org sci-chemistry@gentoo.org > * USE: abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU > * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox >>>> Unpacking source... >>>> Unpacking votca-xtp-1.6_rc1.tar.gz to /var/tmp/portage/sci-chemistry/votca-xtp-1.6_rc1/work >>>> Source unpacked in /var/tmp/portage/sci-chemistry/votca-xtp-1.6_rc1/work >>>> Preparing source in /var/tmp/portage/sci-chemistry/votca-xtp-1.6_rc1/work/xtp-1.6_rc1 ... > * Hardcoded definition(s) removed in CMakeLists.txt: > * set(CMAKE_BUILD_TYPE Release CACHE STRING "Choose the type of build, option >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-chemistry/votca-xtp-1.6_rc1/work/xtp-1.6_rc1 ... >>>> Working in BUILD_DIR: "/var/tmp/portage/sci-chemistry/votca-xtp-1.6_rc1/work/votca-xtp-1.6_rc1_build" >cmake -C /var/tmp/portage/sci-chemistry/votca-xtp-1.6_rc1/work/votca-xtp-1.6_rc1_build/gentoo_common_config.cmake -G Ninja -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-chemistry/votca-xtp-1.6_rc1/work/votca-xtp-1.6_rc1_build/gentoo_toolchain.cmake /var/tmp/portage/sci-chemistry/votca-xtp-1.6_rc1/work/xtp-1.6_rc1 >loading initial cache file /var/tmp/portage/sci-chemistry/votca-xtp-1.6_rc1/work/votca-xtp-1.6_rc1_build/gentoo_common_config.cmake >-- The C compiler identification is GNU 9.3.0 >-- The CXX compiler identification is GNU 9.3.0 >-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc >-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc - works >-- Detecting C compiler ABI info >-- Detecting C compiler ABI info - done >-- Detecting C compile features >-- Detecting C compile features - done >-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++ >-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++ - works >-- Detecting CXX compiler ABI info >-- Detecting CXX compiler ABI info - done >-- Detecting CXX compile features >-- Detecting CXX compile features - done >-- Found OpenMP_C: -fopenmp (found version "4.5") >-- Found OpenMP_CXX: -fopenmp (found version "4.5") >-- Found OpenMP: TRUE (found version "4.5") >-- Found PkgConfig: x86_64-pc-linux-gnu-pkg-config (found version "1.6.3") >-- Checking for module 'libxc' >-- Found libxc, version 3.0.0 >-- Found LIBXC: /usr/lib64/libxc.so >CMake Error at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:164 (message): > Could NOT find HDF5: Found unsuitable version "", but required is at least > "1.8" (found HDF5_hdf5_cpp_LIBRARY-NOTFOUND;/usr/lib64/libhdf5.so) >Call Stack (most recent call first): > /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:443 (_FPHSA_FAILURE_MESSAGE) > /usr/share/cmake/Modules/FindHDF5.cmake:929 (find_package_handle_standard_args) > CMakeLists.txt:48 (find_package) > > >-- Configuring incomplete, errors occurred! >See also "/var/tmp/portage/sci-chemistry/votca-xtp-1.6_rc1/work/votca-xtp-1.6_rc1_build/CMakeFiles/CMakeOutput.log". > * ERROR: sci-chemistry/votca-xtp-1.6_rc1::gentoo failed (configure phase): > * cmake failed > * > * Call stack: > * ebuild.sh, line 125: Called src_configure > * environment, line 2088: Called cmake-utils_src_configure > * environment, line 900: Called die > * The specific snippet of code: > * "${CMAKE_BINARY}" "${cmakeargs[@]}" "${CMAKE_USE_DIR}" || die "cmake failed"; > * > * If you need support, post the output of `emerge --info '=sci-chemistry/votca-xtp-1.6_rc1::gentoo'`, > * the complete build log and the output of `emerge -pqv '=sci-chemistry/votca-xtp-1.6_rc1::gentoo'`. > * The complete build log is located at '/var/log/portage/sci-chemistry:votca-xtp-1.6_rc1:20200402-210108.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-chemistry/votca-xtp-1.6_rc1/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/sci-chemistry/votca-xtp-1.6_rc1/temp/environment'. > * Working directory: '/var/tmp/portage/sci-chemistry/votca-xtp-1.6_rc1/work/votca-xtp-1.6_rc1_build' > * S: '/var/tmp/portage/sci-chemistry/votca-xtp-1.6_rc1/work/xtp-1.6_rc1'
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