bioperl-1.0.2.ebuild

bioperl-1.0.2.ebuild (text/plain), 1.53 KB, created by Gontran Zepeda on 2002-12-02 15:09:08 UTC

# Copyright 2002 Gentoo Technologies, Inc.
# Distributed under the terms of the GNU General Public License, v2 or later
# $Header $
# Author: Gontran Zepeda <[e-mail]>

IUSE="mysql gd"

inherit perl-module

CATEGORY="dev-perl"
DESCRIPTION="The Bioperl Project is a collection of tools for bioinformatics, genomics and life science research."
SRC_URI="ftp://bioperl.org/pub/DIST/${P}.tar.gz"
HOMEPAGE="http://www.bioperl.org"

LICENSE="Artistic | GPL-2"
KEYWORDS="~x86 ~ppc ~sparc ~sparc64 ~alpha"

DEPEND="${DEPEND} 
		dev-perl/File-Temp
		dev-perl/HTML-Parser 
		dev-perl/IO-String 
		dev-perl/IO-stringy
		dev-perl/SOAP-Lite 
		dev-perl/Storable 
		dev-perl/XML-DOM
		dev-perl/XML-Parser 
		dev-perl/XML-Writer 
		dev-perl/XML-Twig 
		dev-perl/libxml-perl 
		dev-perl/libwww-perl 
		dev-perl/Text-Shellwords
		gd? ( >=dev-perl/GD-1.32-r1 )
		mysql? ( >=dev-perl/DBD-mysql-2.1004-r3 )"

SLOT="0"
LICENSE="Artistic | GPL-2"
KEYWORDS="x86"

src_compile() {
	# there's a test to run for BioGFFDB if using mysql
	# note: these echo's are for the default values for testing. Not that we're
	# testing.
	use mysql && (
		echo y  
		echo test
		echo localhost
		echo undef
		echo undef
		) | perl-module_src_compile || perl-module_src_compile || die "compile failed"

	# Sadly, it's not advisable to run make test for this installation, as the
	# tests are used by the bioperl developers as a sort of todo list. :)  IOW,
	# it's OK if some fail.
	#perl-module_src_test || die "test failed"
}
src_install() {
	mydoc="AUTHORS BUGS FAQ"
	perl-module_src_install
}