/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeError.log

CMakeError.log (text/x-log), 12.43 KB, created by Juergen Rose on 2015-12-13 16:27:16 UTC

Determining if the isfinite exist failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp

Run Build Command:"/usr/bin/gmake" "cmTC_bd5a2/fast"
/usr/bin/gmake -f CMakeFiles/cmTC_bd5a2.dir/build.make CMakeFiles/cmTC_bd5a2.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp'
Building CXX object CMakeFiles/cmTC_bd5a2.dir/CheckSymbolExists.cxx.o
/usr/bin/x86_64-pc-linux-gnu-g++     -DNDEBUG -std=c++11 -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wparentheses -Wshadow -Wno-unknown-pragmas -Wno-deprecated -g -march=native -O2 -pipe     -o CMakeFiles/cmTC_bd5a2.dir/CheckSymbolExists.cxx.o -c /var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx
/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx: In function ‘int main(int, char**)’:
/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:8:19: error: ‘isfinite’ was not declared in this scope
   return ((int*)(&isfinite))[argc];
                   ^
/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:8:19: note: suggested alternative:
In file included from /var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:2:0:
/usr/lib/gcc/x86_64-pc-linux-gnu/4.9.3/include/g++-v4/cmath:596:5: note:   ‘std::isfinite’
     isfinite(_Tp __x)
     ^
CMakeFiles/cmTC_bd5a2.dir/build.make:65: recipe for target 'CMakeFiles/cmTC_bd5a2.dir/CheckSymbolExists.cxx.o' failed
gmake[1]: *** [CMakeFiles/cmTC_bd5a2.dir/CheckSymbolExists.cxx.o] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp'
Makefile:126: recipe for target 'cmTC_bd5a2/fast' failed
gmake: *** [cmTC_bd5a2/fast] Error 2

File /var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:
/* */
#include <cmath>

int main(int argc, char** argv)
{
  (void)argv;
#ifndef isfinite
  return ((int*)(&isfinite))[argc];
#else
  (void)argc;
  return 0;
#endif
}

Determining if the function isfinite exists failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp

Run Build Command:"/usr/bin/gmake" "cmTC_93118/fast"
/usr/bin/gmake -f CMakeFiles/cmTC_93118.dir/build.make CMakeFiles/cmTC_93118.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp'
Building C object CMakeFiles/cmTC_93118.dir/CheckFunctionExists.c.o
/usr/bin/x86_64-pc-linux-gnu-gcc     -DNDEBUG -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wparentheses -Wshadow -Wno-unknown-pragmas -Wno-deprecated -g -march=native -O2 -pipe  -DCHECK_FUNCTION_EXISTS=isfinite   -o CMakeFiles/cmTC_93118.dir/CheckFunctionExists.c.o -c /usr/share/cmake/Modules/CheckFunctionExists.c
Linking C executable cmTC_93118
/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_93118.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-gcc  -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wparentheses -Wshadow -Wno-unknown-pragmas -Wno-deprecated -g -march=native -O2 -pipe  -DCHECK_FUNCTION_EXISTS=isfinite   -Wl,-O1 -Wl,--as-needed  CMakeFiles/cmTC_93118.dir/CheckFunctionExists.c.o  -o cmTC_93118 -rdynamic -lm 
CMakeFiles/cmTC_93118.dir/CheckFunctionExists.c.o: In function `main':
/usr/share/cmake/Modules/CheckFunctionExists.c:14: undefined reference to `isfinite'
collect2: error: ld returned 1 exit status
CMakeFiles/cmTC_93118.dir/build.make:97: recipe for target 'cmTC_93118' failed
gmake[1]: *** [cmTC_93118] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp'
Makefile:126: recipe for target 'cmTC_93118/fast' failed
gmake: *** [cmTC_93118/fast] Error 2


Determining if the function arc4random exists failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp

Run Build Command:"/usr/bin/gmake" "cmTC_e7227/fast"
/usr/bin/gmake -f CMakeFiles/cmTC_e7227.dir/build.make CMakeFiles/cmTC_e7227.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp'
Building C object CMakeFiles/cmTC_e7227.dir/CheckFunctionExists.c.o
/usr/bin/x86_64-pc-linux-gnu-gcc     -DNDEBUG -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wparentheses -Wshadow -Wno-unknown-pragmas -Wno-deprecated -g -march=native -O2 -pipe  -DCHECK_FUNCTION_EXISTS=arc4random   -o CMakeFiles/cmTC_e7227.dir/CheckFunctionExists.c.o -c /usr/share/cmake/Modules/CheckFunctionExists.c
Linking C executable cmTC_e7227
/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_e7227.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-gcc  -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wparentheses -Wshadow -Wno-unknown-pragmas -Wno-deprecated -g -march=native -O2 -pipe  -DCHECK_FUNCTION_EXISTS=arc4random   -Wl,-O1 -Wl,--as-needed  CMakeFiles/cmTC_e7227.dir/CheckFunctionExists.c.o  -o cmTC_e7227 -rdynamic -lm 
CMakeFiles/cmTC_e7227.dir/CheckFunctionExists.c.o: In function `main':
/usr/share/cmake/Modules/CheckFunctionExists.c:14: undefined reference to `arc4random'
collect2: error: ld returned 1 exit status
CMakeFiles/cmTC_e7227.dir/build.make:97: recipe for target 'cmTC_e7227' failed
gmake[1]: *** [cmTC_e7227] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp'
Makefile:126: recipe for target 'cmTC_e7227/fast' failed
gmake: *** [cmTC_e7227/fast] Error 2


Determining if the pthread_create exist failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp

Run Build Command:"/usr/bin/gmake" "cmTC_9952e/fast"
/usr/bin/gmake -f CMakeFiles/cmTC_9952e.dir/build.make CMakeFiles/cmTC_9952e.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp'
Building C object CMakeFiles/cmTC_9952e.dir/CheckSymbolExists.c.o
/usr/bin/x86_64-pc-linux-gnu-gcc     -DNDEBUG -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wparentheses -Wshadow -Wno-unknown-pragmas -Wno-deprecated -g -march=native -O2 -pipe     -o CMakeFiles/cmTC_9952e.dir/CheckSymbolExists.c.o -c /var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.c
Linking C executable cmTC_9952e
/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_9952e.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-gcc  -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wparentheses -Wshadow -Wno-unknown-pragmas -Wno-deprecated -g -march=native -O2 -pipe     -Wl,-O1 -Wl,--as-needed  CMakeFiles/cmTC_9952e.dir/CheckSymbolExists.c.o  -o cmTC_9952e -rdynamic -lm 
CMakeFiles/cmTC_9952e.dir/CheckSymbolExists.c.o: In function `main':
/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.c:8: undefined reference to `pthread_create'
collect2: error: ld returned 1 exit status
CMakeFiles/cmTC_9952e.dir/build.make:97: recipe for target 'cmTC_9952e' failed
gmake[1]: *** [cmTC_9952e] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp'
Makefile:126: recipe for target 'cmTC_9952e/fast' failed
gmake: *** [cmTC_9952e/fast] Error 2

File /var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.c:
/* */
#include <pthread.h>

int main(int argc, char** argv)
{
  (void)argv;
#ifndef pthread_create
  return ((int*)(&pthread_create))[argc];
#else
  (void)argc;
  return 0;
#endif
}

Determining if the function pthread_create exists in the pthreads failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp

Run Build Command:"/usr/bin/gmake" "cmTC_3695e/fast"
/usr/bin/gmake -f CMakeFiles/cmTC_3695e.dir/build.make CMakeFiles/cmTC_3695e.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp'
Building C object CMakeFiles/cmTC_3695e.dir/CheckFunctionExists.c.o
/usr/bin/x86_64-pc-linux-gnu-gcc     -DNDEBUG -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wparentheses -Wshadow -Wno-unknown-pragmas -Wno-deprecated -g -march=native -O2 -pipe  -DCHECK_FUNCTION_EXISTS=pthread_create   -o CMakeFiles/cmTC_3695e.dir/CheckFunctionExists.c.o -c /usr/share/cmake/Modules/CheckFunctionExists.c
Linking C executable cmTC_3695e
/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_3695e.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-gcc  -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wparentheses -Wshadow -Wno-unknown-pragmas -Wno-deprecated -g -march=native -O2 -pipe  -DCHECK_FUNCTION_EXISTS=pthread_create   -Wl,-O1 -Wl,--as-needed  CMakeFiles/cmTC_3695e.dir/CheckFunctionExists.c.o  -o cmTC_3695e -rdynamic -lpthreads -lm 
/usr/lib/gcc/x86_64-pc-linux-gnu/4.9.3/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -lpthreads
collect2: error: ld returned 1 exit status
CMakeFiles/cmTC_3695e.dir/build.make:97: recipe for target 'cmTC_3695e' failed
gmake[1]: *** [cmTC_3695e] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp'
Makefile:126: recipe for target 'cmTC_3695e/fast' failed
gmake: *** [cmTC_3695e/fast] Error 2


Determining if the function clapack_dpotrf exists in the  failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp

Run Build Command:"/usr/bin/gmake" "cmTC_fbfb8/fast"
/usr/bin/gmake -f CMakeFiles/cmTC_fbfb8.dir/build.make CMakeFiles/cmTC_fbfb8.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp'
Building C object CMakeFiles/cmTC_fbfb8.dir/CheckFunctionExists.c.o
/usr/bin/x86_64-pc-linux-gnu-gcc     -DNDEBUG -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wparentheses -Wshadow -Wno-unknown-pragmas -Wno-deprecated -g -march=native -O2 -pipe  -fopenmp -DCHECK_FUNCTION_EXISTS=clapack_dpotrf   -o CMakeFiles/cmTC_fbfb8.dir/CheckFunctionExists.c.o -c /usr/share/cmake/Modules/CheckFunctionExists.c
Linking C executable cmTC_fbfb8
/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_fbfb8.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-gcc  -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wparentheses -Wshadow -Wno-unknown-pragmas -Wno-deprecated -g -march=native -O2 -pipe  -fopenmp -DCHECK_FUNCTION_EXISTS=clapack_dpotrf   -Wl,-O1 -Wl,--as-needed  CMakeFiles/cmTC_fbfb8.dir/CheckFunctionExists.c.o  -o cmTC_fbfb8 -rdynamic -lm 
CMakeFiles/cmTC_fbfb8.dir/CheckFunctionExists.c.o: In function `main':
/usr/share/cmake/Modules/CheckFunctionExists.c:14: undefined reference to `clapack_dpotrf'
collect2: error: ld returned 1 exit status
CMakeFiles/cmTC_fbfb8.dir/build.make:97: recipe for target 'cmTC_fbfb8' failed
gmake[1]: *** [cmTC_fbfb8] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp'
Makefile:126: recipe for target 'cmTC_fbfb8/fast' failed
gmake: *** [cmTC_fbfb8/fast] Error 2


Determining if the function cblas_dsyrk exists in the /usr/lib64/libcblas.so failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp

Run Build Command:"/usr/bin/gmake" "cmTC_0bad1/fast"
/usr/bin/gmake -f CMakeFiles/cmTC_0bad1.dir/build.make CMakeFiles/cmTC_0bad1.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp'
Building C object CMakeFiles/cmTC_0bad1.dir/CheckFunctionExists.c.o
/usr/bin/x86_64-pc-linux-gnu-gcc     -DNDEBUG -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wparentheses -Wshadow -Wno-unknown-pragmas -Wno-deprecated -g -march=native -O2 -pipe  -fopenmp -DCHECK_FUNCTION_EXISTS=cblas_dsyrk   -o CMakeFiles/cmTC_0bad1.dir/CheckFunctionExists.c.o -c /usr/share/cmake/Modules/CheckFunctionExists.c
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-3.2.0/work/shogun-3.2.0_build/CMakeFiles/CMakeTmp'
gmake[1]: *** No rule to make target '/usr/lib64/libcblas.so', needed by 'cmTC_0bad1'.  Stop.
Makefile:126: recipe for target 'cmTC_0bad1/fast' failed
gmake: *** [cmTC_0bad1/fast] Error 2