apbs-1.4.1-r2:20150807-091504.log

apbs-1.4.1-r2:20150807-091504.log (text/plain), 4.31 KB, created by Agostino Sarubbo on 2015-08-07 09:19:17 UTC

 * Package:    sci-chemistry/apbs-1.4.1-r2
 * Repository: gentoo
 * Maintainer: [e-mail] [e-mail]
 * USE:        abi_x86_64 amd64 elibc_glibc fetk iapbs kernel_linux openmp python python_targets_python2_7 tools userland_GNU
 * FEATURES:   preserve-libs sandbox userpriv usersandbox
 * Applying apbs-1.4.1-multilib.patch ...
 [ ok ]
 * Applying apbs-1.4.1-manip.patch ...
 [ ok ]
 * Applying apbs-1.4.1-python.patch ...
 [ ok ]
>>> Working in BUILD_DIR: "/var/tmp/portage/sci-chemistry/apbs-1.4.1-r2/work/apbs-1.4.1_build"
cmake --no-warn-unused-cli -C /var/tmp/portage/sci-chemistry/apbs-1.4.1-r2/work/apbs-1.4.1_build/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_SKIP_RPATH=ON -DTOOLS_PATH=/var/tmp/portage/sci-chemistry/apbs-1.4.1-r2/image//usr -DSYS_LIBPATHS=/usr/lib64 -DLIBRARY_INSTALL_PATH=lib64 -DFETK_PATH=/usr/ -DBUILD_SHARED_LIBS=ON -DENABLE_QUIT=OFF -DBUILD_DOC=OFF -DBUILD_TOOLS=ON -DENABLE_BEM=OFF -DENABLE_DEBUG=OFF -DENABLE_VERBOSE_DEBUG=OFF -DENABLE_FAST=OFF -DENABLE_FETK=ON -DENABLE_MPI=OFF -DENABLE_PYTHON=ON -DENABLE_iAPBS=ON -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_INSTALL_DO_STRIP=OFF -DCMAKE_USER_MAKE_RULES_OVERRIDE=/var/tmp/portage/sci-chemistry/apbs-1.4.1-r2/work/apbs-1.4.1_build/gentoo_rules.cmake -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-chemistry/apbs-1.4.1-r2/work/apbs-1.4.1_build/gentoo_toolchain.cmake  /var/tmp/portage/sci-chemistry/apbs-1.4.1-r2/work/apbs-pdb2pqr-74fcb8676de69ed04ddab8976a8b05a6caaf4d65/apbs
Not searching for unused variables given on the command line.
loading initial cache file /var/tmp/portage/sci-chemistry/apbs-1.4.1-r2/work/apbs-1.4.1_build/gentoo_common_config.cmake
-- The C compiler identification is GNU 4.8.4
-- The CXX compiler identification is GNU 4.8.4
-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc
-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++
-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Setting project paths
-- Setting lookup paths for headers and libraries
-- Computing machine epsilon values
-- Floating point epsilon is 2.220446e-16
-- Double precision epsilon is 2.220446e-16
-- Looking for time
-- Looking for time - found
-- Looking for rand
-- Looking for rand - found
-- Looking for srand
-- Looking for srand - found
-- Found fetk: /usr
-- External maloc library was found: /usr/lib64/libmaloc.so
-- External maloc headers found
-- Checking for fetk components
-- Inline functions enabled
-- Looking for python components
-- Found PythonInterp: /usr/bin/python (found version "3.4.1") 
-- Could NOT find PythonLibs (missing:  PYTHON_LIBRARIES PYTHON_INCLUDE_DIRS) 
CMake Error at CMakeLists.txt:423 (message):
  Couldn't find python libraries


-- Configuring incomplete, errors occurred!
See also "/var/tmp/portage/sci-chemistry/apbs-1.4.1-r2/work/apbs-1.4.1_build/CMakeFiles/CMakeOutput.log".
 * ERROR: sci-chemistry/apbs-1.4.1-r2::gentoo failed (configure phase):
 *   cmake failed
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_configure
 *   environment, line 4322:  Called cmake-utils_src_configure
 *   environment, line 1090:  Called _execute_optionally 'src_configure'
 *   environment, line  470:  Called enable_cmake-utils_src_configure
 *   environment, line 1648:  Called die
 * The specific snippet of code:
 *       "${CMAKE_BINARY}" "${cmakeargs[@]}" "${CMAKE_USE_DIR}" || die "cmake failed";
 * 
 * If you need support, post the output of `emerge --info '=sci-chemistry/apbs-1.4.1-r2::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-chemistry/apbs-1.4.1-r2::gentoo'`.
 * The complete build log is located at '/var/log/log/build/sci-chemistry/apbs-1.4.1-r2:20150807-091504.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-chemistry/apbs-1.4.1-r2/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-chemistry/apbs-1.4.1-r2/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-chemistry/apbs-1.4.1-r2/work/apbs-1.4.1_build'
 * S: '/var/tmp/portage/sci-chemistry/apbs-1.4.1-r2/work/apbs-pdb2pqr-74fcb8676de69ed04ddab8976a8b05a6caaf4d65/apbs'