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Gentoo's Bugzilla – Attachment 396746 Details for
Bug 540314
sci-libs/scipy-0.14.0-r1 with dev-python/cython-0.22 - python3_4: running distutils-r1_run_phase python_compile: Error compiling Cython file: ...
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build.log
build.log (text/plain), 4.77 KB, created by
Denys Duchier
on 2015-02-17 20:06:42 UTC
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Description:
build.log
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Creator:
Denys Duchier
Created:
2015-02-17 20:06:42 UTC
Size:
4.77 KB
patch
obsolete
>[32;01m * [39;49;00mPackage: sci-libs/scipy-0.14.0-r1 >[32;01m * [39;49;00mRepository: gentoo >[32;01m * [39;49;00mMaintainer: sci@gentoo.org >[32;01m * [39;49;00mUSE: abi_x86_64 amd64 elibc_glibc kernel_linux python_targets_python2_7 python_targets_python3_4 sparse userland_GNU >[32;01m * [39;49;00mFEATURES: preserve-libs sandbox userpriv usersandbox > [32;01m*[0m Using following Fortran compiler: > [32;01m*[0m F77: x86_64-pc-linux-gnu-gfortran > [32;01m*[0m FC: x86_64-pc-linux-gnu-gfortran >>>> Unpacking source... >>>> Unpacking scipy-0.14.0.tar.gz to /var/tmp/portage/sci-libs/scipy-0.14.0-r1/work >>>> Source unpacked in /var/tmp/portage/sci-libs/scipy-0.14.0-r1/work >>>> Preparing source in /var/tmp/portage/sci-libs/scipy-0.14.0-r1/work/scipy-0.14.0 ... > [32;01m*[0m Applying scipy-0.12.0-blitz.patch ... >[A[126C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying scipy-0.12.0-restore-sys-argv.patch ... >[A[126C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying scipy-0.12.0-cephes-missing-include.patch ... >[A[126C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying scipy-0.14.0-lsqr-backport.patch ... >[A[126C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Will copy sources from /var/tmp/portage/sci-libs/scipy-0.14.0-r1/work/scipy-0.14.0 > [32;01m*[0m python3_4: copying to /var/tmp/portage/sci-libs/scipy-0.14.0-r1/work/scipy-0.14.0-python3_4 > [32;01m*[0m python2_7: copying to /var/tmp/portage/sci-libs/scipy-0.14.0-r1/work/scipy-0.14.0-python2_7 >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-libs/scipy-0.14.0-r1/work/scipy-0.14.0 ... >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-libs/scipy-0.14.0-r1/work/scipy-0.14.0 ... > [32;01m*[0m python3_4: running distutils-r1_run_phase python_compile > >Error compiling Cython file: >------------------------------------------------------------ >... > > cpdef int all_data_read(self): > return (self._max_length == self._read_bytes) and \ > (self._buffer_size == self._buffer_position) > > cpdef long int tell(self): > ^ >------------------------------------------------------------ > >streams.pyx:204:10: Signature not compatible with previous declaration >Processing scipy/signal/_spectral.pyx >Processing scipy/spatial/ckdtree.pyx >Processing scipy/spatial/qhull.pyx >Processing scipy/cluster/_vq_rewrite.pyx >Processing scipy/io/matlab/mio_utils.pyx >Processing scipy/io/matlab/mio5_utils.pyx >Processing scipy/io/matlab/streams.pyx >Traceback (most recent call last): > File "tools/cythonize.py", line 198, in <module> > main() > File "tools/cythonize.py", line 194, in main > find_process_files(root_dir) > File "tools/cythonize.py", line 186, in find_process_files > process(cur_dir, fromfile, tofile, function, hash_db) > File "tools/cythonize.py", line 160, in process > processor_function(fromfile, tofile) > File "tools/cythonize.py", line 71, in process_pyx > raise Exception('Cython failed') >Exception: Cython failed > [31;01m*[0m ERROR: sci-libs/scipy-0.14.0-r1::gentoo failed (compile phase): > [31;01m*[0m (no error message) > [31;01m*[0m > [31;01m*[0m Call stack: > [31;01m*[0m ebuild.sh, line 93: Called src_compile > [31;01m*[0m environment, line 4409: Called distutils-r1_src_compile > [31;01m*[0m environment, line 1508: Called _distutils-r1_run_foreach_impl 'python_compile' > [31;01m*[0m environment, line 359: Called python_foreach_impl 'distutils-r1_run_phase' 'python_compile' > [31;01m*[0m environment, line 3839: Called multibuild_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' > [31;01m*[0m environment, line 2926: Called _multibuild_run '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' > [31;01m*[0m environment, line 2924: Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile' > [31;01m*[0m environment, line 1000: Called distutils-r1_run_phase 'python_compile' > [31;01m*[0m environment, line 1501: Called python_compile > [31;01m*[0m environment, line 3440: Called die > [31;01m*[0m The specific snippet of code: > [31;01m*[0m ${EPYTHON} tools/cythonize.py || die; > [31;01m*[0m > [31;01m*[0m If you need support, post the output of `emerge --info '=sci-libs/scipy-0.14.0-r1::gentoo'`, > [31;01m*[0m the complete build log and the output of `emerge -pqv '=sci-libs/scipy-0.14.0-r1::gentoo'`. > [31;01m*[0m The complete build log is located at '/var/tmp/portage/sci-libs/scipy-0.14.0-r1/temp/build.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-libs/scipy-0.14.0-r1/temp/environment'. > [31;01m*[0m Working directory: '/var/tmp/portage/sci-libs/scipy-0.14.0-r1/work/scipy-0.14.0-python3_4' > [31;01m*[0m S: '/var/tmp/portage/sci-libs/scipy-0.14.0-r1/work/scipy-0.14.0'
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bug 540314
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