Attachment 390512 Details for Bug 531042 – build.log

build.log

geant-4.10.00_p01:20141128-205423.log (text/plain), 39.32 KB, created by Pacho Ramos on 2014-11-28 20:58:17 UTC

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Creator: Pacho Ramos

Created: 2014-11-28 20:58:17 UTC

Size: 39.32 KB

patch

obsolete

>[32;01m * [39;49;00mPackage:    sci-physics/geant-4.10.00_p01
>[32;01m * [39;49;00mRepository: gentoo
>[32;01m * [39;49;00mMaintainer: sci-physics@gentoo.org
>[32;01m * [39;49;00mUSE:        abi_x86_64 amd64 data elibc_glibc kernel_linux opengl qt4 threads userland_GNU zlib
>[32;01m * [39;49;00mFEATURES:   ccache preserve-libs sandbox userpriv usersandbox
> [32;01m*[0m Using following Fortran compiler:
> [32;01m*[0m   F77: x86_64-pc-linux-gnu-gfortran
> [32;01m*[0m   FC:  x86_64-pc-linux-gnu-gfortran
>>>> Unpacking source...
>>>> Unpacking geant4.10.00.p01.tar.gz to /var/tmp/portage/sci-physics/geant-4.10.00_p01/work
>>>> Source unpacked in /var/tmp/portage/sci-physics/geant-4.10.00_p01/work
>>>> Preparing source in /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01 ...
>>>> Source prepared.
>>>> Configuring source in /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01 ...
>>>> Working in BUILD_DIR: "/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build"
>cmake --no-warn-unused-cli -C /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DGEANT4_USE_SYSTEM_CLHEP=ON -DCMAKE_INSTALL_LIBDIR=/usr/lib64 -DGEANT4_INSTALL_DATA=OFF -DGEANT4_BUILD_MULTITHREADED=ON -DGEANT4_USE_NETWORKDAWN=OFF -DGEANT4_USE_GDML=OFF -DGEANT4_USE_G3TOG4=OFF -DGEANT4_USE_XM=OFF -DGEANT4_USE_OPENGL_X11=ON -DGEANT4_USE_INVENTOR=OFF -DGEANT4_USE_QT=ON -DGEANT4_USE_RAYTRACER_X11=OFF -DGEANT4_USE_NETWORKVRML=OFF -DGEANT4_USE_SYSTEM_ZLIB=ON -DBUILD_STATIC_LIBS=OFF -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_INSTALL_DO_STRIP=OFF -DCMAKE_USER_MAKE_RULES_OVERRIDE=/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/gentoo_rules.cmake -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/gentoo_toolchain.cmake  /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01
>Not searching for unused variables given on the command line.
>loading initial cache file /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/gentoo_common_config.cmake
>-- The C compiler identification is GNU 4.8.3
>-- The CXX compiler identification is GNU 4.8.3
>-- Check for working C compiler: /usr/lib64/ccache/bin/x86_64-pc-linux-gnu-gcc
>-- Check for working C compiler: /usr/lib64/ccache/bin/x86_64-pc-linux-gnu-gcc -- works
>-- Detecting C compiler ABI info
>-- Detecting C compiler ABI info - done
>-- Check for working CXX compiler: /usr/lib64/ccache/bin/x86_64-pc-linux-gnu-g++
>-- Check for working CXX compiler: /usr/lib64/ccache/bin/x86_64-pc-linux-gnu-g++ -- works
>-- Detecting CXX compiler ABI info
>-- Detecting CXX compiler ABI info - done
>-- Performing Test HAVE_TLS
>-- Performing Test HAVE_TLS - Success
>-- Found CLHEP Version 2.2.0.1
>-- Found CLHEP: /usr/lib64/libCLHEP.so (Required is at least version "2.1.2.3") 
>-- Found EXPAT: /usr/lib64/libexpat.so (found version "2.1.0") 
>-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.8") 
>-- Looking for Q_WS_X11
>-- Looking for Q_WS_X11 - found
>-- Looking for Q_WS_WIN
>-- Looking for Q_WS_WIN - not found
>-- Looking for Q_WS_QWS
>-- Looking for Q_WS_QWS - not found
>-- Looking for Q_WS_MAC
>-- Looking for Q_WS_MAC - not found
>-- Found Qt4: /usr/bin/qmake (found version "4.8.5") 
>-- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so
>-- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so - found
>-- Looking for gethostbyname
>-- Looking for gethostbyname - found
>-- Looking for connect
>-- Looking for connect - found
>-- Looking for remove
>-- Looking for remove - found
>-- Looking for shmat
>-- Looking for shmat - found
>-- Looking for IceConnectionNumber in ICE
>-- Looking for IceConnectionNumber in ICE - found
>-- Found X11: /usr/lib64/libX11.so
>-- Found OpenGL: /usr/lib64/libGL.so  
>-- Pre-configuring dataset G4NDL (4.4)
>-- Pre-configuring dataset G4EMLOW (6.35)
>-- Pre-configuring dataset PhotonEvaporation (3.0)
>-- Pre-configuring dataset RadioactiveDecay (4.0)
>-- Pre-configuring dataset G4NEUTRONXS (1.4)
>-- Pre-configuring dataset G4PII (1.3)
>-- Pre-configuring dataset RealSurface (1.0)
>-- Pre-configuring dataset G4SAIDDATA (1.1)
>-- Pre-configuring dataset G4ABLA (3.0)
>-- Pre-configuring dataset G4ENSDFSTATE (1.0)
>  *WARNING*
>    Geant4 has been pre-configured to look for datasets
>    in the directory:
> 
>    /usr/share/Geant4-10.0.1/data
> 
>    but the following datasets are NOT present on disk at
>    that location:
> 
>    G4NDL (4.4)
>    G4EMLOW (6.35)
>    PhotonEvaporation (3.0)
>    RadioactiveDecay (4.0)
>    G4NEUTRONXS (1.4)
>    G4PII (1.3)
>    RealSurface (1.0)
>    G4SAIDDATA (1.1)
>    G4ABLA (3.0)
>    G4ENSDFSTATE (1.0)
> 
>    If you want to have these datasets installed automatically
>    simply re-run cmake and set the GEANT4_INSTALL_DATA
>    variable to ON. This will configure the build to download
>    and install these datasets for you. For example, on the
>    command line, do:
> 
>    cmake -DGEANT4_INSTALL_DATA=ON <otherargs>
> 
>    The variable can also be toggled in ccmake or cmake-gui.
>    If you're running on a Windows system, this is the best
>    solution as CMake will unpack the datasets for you
>    without any further software being required
> 
>    Alternatively, you can install these datasets manually
>    now or after you have installed Geant4. To do this,
>    download the following files:
> 
>    http://geant4.cern.ch/support/source/G4NDL.4.4.tar.gz
>    http://geant4.cern.ch/support/source/G4EMLOW.6.35.tar.gz
>    http://geant4.cern.ch/support/source/G4PhotonEvaporation.3.0.tar.gz
>    http://geant4.cern.ch/support/source/G4RadioactiveDecay.4.0.tar.gz
>    http://geant4.cern.ch/support/source/G4NEUTRONXS.1.4.tar.gz
>    http://geant4.cern.ch/support/source/G4PII.1.3.tar.gz
>    http://geant4.cern.ch/support/source/RealSurface.1.0.tar.gz
>    http://geant4.cern.ch/support/source/G4SAIDDATA.1.1.tar.gz
>    http://geant4.cern.ch/support/source/G4ABLA.3.0.tar.gz
>    http://geant4.cern.ch/support/source/G4ENSDFSTATE.1.0.tar.gz
> 
>    and unpack them under the directory:
> 
>    /usr/share/Geant4-10.0.1/data
> 
>    As we supply the datasets packed in gzipped tar files,
>    you will need the 'tar' utility to unpack them.
> 
>    Nota bene: Missing datasets will not affect or break
>               compilation and installation of the Geant4
>               libraries.
> 
>CMake Warning (dev) in source/processes/CMakeLists.txt:
>  Policy CMP0022 is not set: INTERFACE_LINK_LIBRARIES defines the link
>  interface.  Run "cmake --help-policy CMP0022" for policy details.  Use the
>  cmake_policy command to set the policy and suppress this warning.
>
>  Target "G4processes" has an INTERFACE_LINK_LIBRARIES property.  This should
>  be preferred as the source of the link interface for this library but
>  because CMP0022 is not set CMake is ignoring the property and using the
>  link implementation as the link interface instead.
>
>  INTERFACE_LINK_LIBRARIES:
>
>    G4digits_hits;G4geometry;G4global;G4intercoms;G4materials;G4particles;G4track;G4processes;/usr/lib64/libexpat.so;/usr/lib64/libz.so
>
>  Link implementation:
>
>    G4digits_hits;G4geometry;G4global;G4intercoms;G4materials;G4particles;G4track;/usr/lib64/libexpat.so;/usr/lib64/libz.so
>
>This warning is for project developers.  Use -Wno-dev to suppress it.
>
>-- The following Geant4 features are enabled:
>GEANT4_BUILD_MULTITHREADED: Build multithread enabled libraries
>GEANT4_BUILD_CXXSTD: Compiling against C++ Standard 'c++98'
>GEANT4_USE_SYSTEM_CLHEP: Using system CLHEP library
>GEANT4_USE_SYSTEM_EXPAT: Using system EXPAT library
>GEANT4_USE_SYSTEM_ZLIB: Using system zlib library
>GEANT4_USE_QT: Build Geant4 with Qt support
>GEANT4_USE_OPENGL_X11: Build Geant4 OpenGL driver with X11 support
>
>-- <<< Gentoo configuration >>>
>Build type      Gentoo
>Install path    /usr
>Compiler flags:
>C               -O2 -pipe -march=native -fno-stack-protector 
>C++             -O2 -pipe -march=native -fno-stack-protector -W -Wall -pedantic -Wno-non-virtual-dtor -Wno-long-long -Wwrite-strings -Wpointer-arith -Woverloaded-virtual -Wno-variadic-macros -Wshadow -pipe -ftls-model=initial-exec -pthread -std=c++98
>Linker flags:
>Executable       -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu
>Module           -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu
>Shared           -Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu
>
>-- Configuring done
>-- Generating done
>-- Build files have been written to: /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build
>>>> Source configured.
>>>> Compiling source in /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01 ...
>>>> Working in BUILD_DIR: "/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build"
>make -j5 VERBOSE=1 
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>make[2]: Entering directory '/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build'
>cd /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01 /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01/source/visualization/externals/gl2ps /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/source/visualization/externals/gl2ps /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/source/visualization/externals/gl2ps/CMakeFiles/G4gl2ps.dir/DependInfo.cmake --color=
>make[2]: Entering directory '/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build'
>cd /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01 /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01/source/global /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/source/global /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/source/global/CMakeFiles/G4global.dir/DependInfo.cmake --color=
>Dependee "/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/source/visualization/externals/gl2ps/CMakeFiles/G4gl2ps.dir/DependInfo.cmake" is newer than depender "/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/source/visualization/externals/gl2ps/CMakeFiles/G4gl2ps.dir/depend.internal".
>Dependee "/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/source/visualization/externals/gl2ps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/source/visualization/externals/gl2ps/CMakeFiles/G4gl2ps.dir/depend.internal".
>[35m[1mScanning dependencies of target G4gl2ps
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>Dependee "/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/source/global/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/source/global/CMakeFiles/G4global.dir/depend.internal".
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>[  0%] Built target G4gl2ps
>/usr/bin/cmake -E cmake_progress_report /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/CMakeFiles 
>[  0%] [32mBuilding CXX object source/global/CMakeFiles/G4global.dir/HEPRandom/src/G4MTRandBit.cc.o
>[0mcd /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build/source/global && /usr/lib64/ccache/bin/x86_64-pc-linux-gnu-g++  -DG4GLOB_ALLOC_EXPORT -DG4MULTITHREADED -DG4VERBOSE -DG4_STORE_TRAJECTORY -DG4global_EXPORTS -DGEANT4_DEVELOPER_GENTOO  -DNDEBUG -O2 -pipe -march=native -fno-stack-protector -W -Wall -pedantic -Wno-non-virtual-dtor -Wno-long-long -Wwrite-strings -Wpointer-arith -Woverloaded-virtual -Wno-variadic-macros -Wshadow -pipe -ftls-model=initial-exec -pthread -std=c++98 -fPIC -I/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01/source/global/management/include -I/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01/source/global/HEPGeometry/include -I/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01/source/global/HEPNumerics/include -I/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01/source/global/HEPRandom/include    -o CMakeFiles/G4global.dir/HEPRandom/src/G4MTRandBit.cc.o -c /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01/source/global/HEPRandom/src/G4MTRandBit.cc
>In file included from /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01/source/global/HEPRandom/include/G4MTHepRandom.hh:40:0,
>                 from /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01/source/global/HEPRandom/src/G4MTHepRandom.cc:34:
>/usr/include/CLHEP/Random/RandFlat.h:35:40: fatal error: CLHEP/Utility/thread_local.h: No such file or directory
> #include "CLHEP/Utility/thread_local.h"
>                                        ^
>compilation terminated.
>source/global/CMakeFiles/G4global.dir/build.make:356: recipe for target 'source/global/CMakeFiles/G4global.dir/HEPRandom/src/G4MTHepRandom.cc.o' failed
>make[2]: *** [source/global/CMakeFiles/G4global.dir/HEPRandom/src/G4MTHepRandom.cc.o] Error 1
>make[2]: *** Waiting for unfinished jobs....
>In file included from /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01/source/global/HEPRandom/include/G4MTHepRandom.hh:40:0,
>                 from /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01/source/global/HEPRandom/include/G4MTRandFlat.hh:38,
>                 from /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01/source/global/HEPRandom/include/G4MTRandBit.hh:38,
>                 from /var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01/source/global/HEPRandom/src/G4MTRandBit.cc:31:
>/usr/include/CLHEP/Random/RandFlat.h:35:40: fatal error: CLHEP/Utility/thread_local.h: No such file or directory
> #include "CLHEP/Utility/thread_local.h"
>                                        ^
>compilation terminated.
>source/global/CMakeFiles/G4global.dir/build.make:379: recipe for target 'source/global/CMakeFiles/G4global.dir/HEPRandom/src/G4MTRandBit.cc.o' failed
>make[2]: *** [source/global/CMakeFiles/G4global.dir/HEPRandom/src/G4MTRandBit.cc.o] Error 1
>make[2]: Leaving directory '/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build'
>CMakeFiles/Makefile2:911: recipe for target 'source/global/CMakeFiles/G4global.dir/all' failed
>make[1]: *** [source/global/CMakeFiles/G4global.dir/all] Error 2
>make[1]: Leaving directory '/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build'
>Makefile:136: recipe for target 'all' failed
>make: *** [all] Error 2
> [31;01m*[0m ERROR: sci-physics/geant-4.10.00_p01::gentoo failed (compile phase):
> [31;01m*[0m   emake failed
> [31;01m*[0m 
> [31;01m*[0m If you need support, post the output of `emerge --info '=sci-physics/geant-4.10.00_p01::gentoo'`,
> [31;01m*[0m the complete build log and the output of `emerge -pqv '=sci-physics/geant-4.10.00_p01::gentoo'`.
> [31;01m*[0m The complete build log is located at '/var/log/portage/build/sci-physics/geant-4.10.00_p01:20141128-205423.log'.
> [31;01m*[0m For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-physics/geant-4.10.00_p01/temp/build.log'.
> [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-physics/geant-4.10.00_p01/temp/environment'.
> [31;01m*[0m Working directory: '/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant-4.10.00_p01_build'
> [31;01m*[0m S: '/var/tmp/portage/sci-physics/geant-4.10.00_p01/work/geant4.10.00.p01'

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