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Gentoo's Bugzilla – Attachment 334176 Details for
Bug 449984
dev-lang/gdl-0.9.3 - CMake Error at CMakeLists.txt:404 (message): NetCDF version 3.5.1 or later is required but was not found.
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/var/tmp/portage/dev-lang/gdl-0.9.3/temp/build.log
build.log (text/plain), 7.15 KB, created by
Juergen Rose
on 2013-01-03 11:34:55 UTC
(
hide
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Description:
/var/tmp/portage/dev-lang/gdl-0.9.3/temp/build.log
Filename:
MIME Type:
Creator:
Juergen Rose
Created:
2013-01-03 11:34:55 UTC
Size:
7.15 KB
patch
obsolete
>[32;01m * [39;49;00mPackage: dev-lang/gdl-0.9.3 >[32;01m * [39;49;00mRepository: gentoo >[32;01m * [39;49;00mMaintainer: sci@gentoo.org >[32;01m * [39;49;00mUSE: amd64 elibc_glibc fftw hdf hdf5 imagemagick kernel_linux multilib netcdf openmp postscript proj python userland_GNU wxwidgets >[32;01m * [39;49;00mFEATURES: sandbox >>>> Unpacking source... >>>> Unpacking gdl-0.9.3.tar.gz to /var/tmp/portage/dev-lang/gdl-0.9.3/work >>>> Source unpacked in /var/tmp/portage/dev-lang/gdl-0.9.3/work >>>> Preparing source in /var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3 ... > [32;01m*[0m Applying 0.9.2-antlr.patch ... >[A[114C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0.9.2-proj4.patch ... >[A[114C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0.9.2-include.patch ... >[A[114C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0.9.2-tests.patch ... >[A[114C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0.9.2-semaphore.patch ... >[A[114C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying 0.9.3-sstream.patch ... >[A[114C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Regenerate grammar >ANTLR Parser Generator Version 2.7.7 (20121114) 1989-2005 >ANTLR Parser Generator Version 2.7.7 (20121114) 1989-2005 >ANTLR Parser Generator Version 2.7.7 (20121114) 1989-2005 >ANTLR Parser Generator Version 2.7.7 (20121114) 1989-2005 >ANTLR Parser Generator Version 2.7.7 (20121114) 1989-2005 >ANTLR Parser Generator Version 2.7.7 (20121114) 1989-2005 >ANTLR Parser Generator Version 2.7.7 (20121114) 1989-2005 >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3 ... >>>> Working in BUILD_DIR: "/var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3_build" >cmake --no-warn-unused-cli -C /var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3_build/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DMPICH=OFF -DBUNDLED_ANTLR=OFF -DX11=ON -Dfftw=ON -DFFTW=ON -DFftw=ON -Dgrib=OFF -DGRIB=OFF -DGrib=OFF -Dgshhs=OFF -DGSHHS=OFF -DGshhs=OFF -Dhdf=ON -DHDF=ON -DHdf=ON -Dhdf5=ON -DHDF5=ON -DHdf5=ON -DMAGICK=ON -Dnetcdf=ON -DNETCDF=ON -DNetcdf=ON -Dopenmp=ON -DOPENMP=ON -DOpenmp=ON -DLIBPROJ4=ON -DPSLIB=ON -Dudunits=OFF -DUDUNITS=OFF -DUdunits=OFF -Dwxwidgets=ON -DWXWIDGETS=ON -DWxwidgets=ON -DPYTHON_MODULE=OFF -DPYTHON=OFF -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_INSTALL_DO_STRIP=OFF -DCMAKE_USER_MAKE_RULES_OVERRIDE=/var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3_build/gentoo_rules.cmake /var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3 >Not searching for unused variables given on the command line. >loading initial cache file /var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3_build/gentoo_common_config.cmake >Re-run cmake no build system arguments >-- The C compiler identification is GNU 4.6.3 >-- The CXX compiler identification is GNU 4.6.3 >-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc >-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- works >-- Detecting C compiler ABI info >-- Detecting C compiler ABI info - done >-- Check for working CXX compiler: /usr/bin/mpicxx >-- Check for working CXX compiler: /usr/bin/mpicxx -- works >-- Detecting CXX compiler ABI info >-- Detecting CXX compiler ABI info - done >-- Found PkgConfig: /usr/bin/pkg-config (found version "0.27.1") >-- Looking for dlopen in dl >-- Looking for dlopen in dl - found >-- Looking for malloc_zone_statistics >-- Looking for malloc_zone_statistics - not found >-- Looking for sbrk >-- Looking for sbrk - found >-- Looking for mallinfo >-- Looking for mallinfo - found >-- Looking for malloc.h >-- Looking for malloc.h - found >-- Looking for malloc/malloc.h >-- Looking for malloc/malloc.h - not found >-- Looking for locale.h >-- Looking for locale.h - found >-- Looking for stdint.h >-- Looking for stdint.h - found >-- Looking for stdlib.h >-- Looking for stdlib.h - found >-- Looking for string.h >-- Looking for string.h - found >-- Looking for strings.h >-- Looking for strings.h - found >-- Looking for sys/stat.h >-- Looking for sys/stat.h - found >-- Looking for sys/types.h >-- Looking for sys/types.h - found >-- Looking for unistd.h >-- Looking for unistd.h - found >-- Looking for ext/stdio_filebuf.h >-- Looking for ext/stdio_filebuf.h - not found >-- Looking for dlfcn.h >-- Looking for dlfcn.h - found >-- Looking for inttypes.h >-- Looking for inttypes.h - found >-- Looking for nexttoward in m >-- Looking for nexttoward in m - found >-- Looking for mpi.h >-- Looking for mpi.h - found >-- Looking for wsyncup in /usr/lib64/libcurses.so >-- Looking for wsyncup in /usr/lib64/libcurses.so - found >-- Looking for rl_get_screen_size in /usr/lib64/libreadline.so;/usr/lib64/libhistory.so >-- Looking for rl_get_screen_size in /usr/lib64/libreadline.so;/usr/lib64/libhistory.so - found >-- Try OpenMP C flag = [-fopenmp] >-- Performing Test OpenMP_FLAG_DETECTED >-- Performing Test OpenMP_FLAG_DETECTED - Success >-- Try OpenMP CXX flag = [-fopenmp] >-- Performing Test OpenMP_FLAG_DETECTED >-- Performing Test OpenMP_FLAG_DETECTED - Success >-- Found PLPLOT: /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so >-- Looking for plP_mmpcx in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so >-- Looking for plP_mmpcx in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so - found >-- OK for XYOUTS in plplot >-- Looking for plGetDrvDir in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so >-- Looking for plGetDrvDir in /usr/lib64/libplplotd.so;/usr/lib64/libplplotcxxd.so - not found >-- checking for module 'netcdf' >-- found netcdf, version 4.1.3 >-- Could NOT find NETCDF (missing: NETCDF_INCLUDE_DIRS) >CMake Error at CMakeLists.txt:404 (message): > NetCDF version 3.5.1 or later is required but was not found. > > Use -DNETCDFDIR=DIR to specify the netcdf directory tree. > > Use -DNETCDF=OFF to not use it. > > (suitable Debian/Ubuntu package: libnetcdf-dev) > > (suitable Fedora package: netcdf-devel) > > >-- Configuring incomplete, errors occurred! > [31;01m*[0m ERROR: dev-lang/gdl-0.9.3 failed (configure phase): > [31;01m*[0m cmake failed > [31;01m*[0m > [31;01m*[0m Call stack: > [31;01m*[0m ebuild.sh, line 93: Called src_configure > [31;01m*[0m environment, line 5696: Called configuration '-DPYTHON_MODULE=OFF' '-DPYTHON=OFF' > [31;01m*[0m environment, line 5694: Called cmake-utils_src_configure > [31;01m*[0m environment, line 1549: Called _execute_optionaly 'src_configure' > [31;01m*[0m environment, line 576: Called enable_cmake-utils_src_configure > [31;01m*[0m environment, line 1862: Called die > [31;01m*[0m The specific snippet of code: > [31;01m*[0m "${CMAKE_BINARY}" "${cmakeargs[@]}" "${CMAKE_USE_DIR}" || die "cmake failed"; > [31;01m*[0m > [31;01m*[0m If you need support, post the output of `emerge --info '=dev-lang/gdl-0.9.3'`, > [31;01m*[0m the complete build log and the output of `emerge -pqv '=dev-lang/gdl-0.9.3'`. > [31;01m*[0m The complete build log is located at '/var/tmp/portage/dev-lang/gdl-0.9.3/temp/build.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/dev-lang/gdl-0.9.3/temp/environment'. > [31;01m*[0m Working directory: '/var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3_build' > [31;01m*[0m S: '/var/tmp/portage/dev-lang/gdl-0.9.3/work/gdl-0.9.3'
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bug 449984
: 334176