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Gentoo's Bugzilla – Attachment 295103 Details for
Bug 351206
dev-python/cython fails tests with >=dev-python/numpy-1.5
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the build log
cython-0.15.1-tail-build.log (text/plain), 8.90 KB, created by
Ian Delaney (RETIRED)
on 2011-12-07 17:58:43 UTC
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Description:
the build log
Filename:
MIME Type:
Creator:
Ian Delaney (RETIRED)
Created:
2011-12-07 17:58:43 UTC
Size:
8.90 KB
patch
obsolete
>[32;01m * [39;49;00mPackage: dev-python/cython-0.15.1 >[32;01m * [39;49;00mRepository: progress >[32;01m * [39;49;00mUSE: amd64 elibc_glibc kernel_linux multilib python_abis_2.5 python_abis_2.6 python_abis_2.7 python_abis_3.1 python_abis_3.2 test userland_GNU >[32;01m * [39;49;00mFEATURES: sandbox test userpriv usersandbox >[32;01m * [39;49;00mPackage: dev-python/cython-0.15.1 >[32;01m * [39;49;00mRepository: progress >[32;01m * [39;49;00mUSE: amd64 elibc_glibc kernel_linux multilib python_abis_2.5 python_abis_2.6 python_abis_2.7 python_abis_3.1 python_abis_3.2 test userland_GNU >[32;01m * [39;49;00mFEATURES: sandbox test userpriv usersandbox >>>> Unpacking source... >>>> Unpacking Cython-0.15.1.tar.gz to /mnt/gen2/tmpdir/portage/dev-python/cython-0.15.1/work >>>> Source unpacked in /mnt/gen2/tmpdir/portage/dev-python/cython-0.15.1/work >>>> Preparing source in /mnt/gen2/tmpdir/portage/dev-python/cython-0.15.1/work/Cython-0.15.1 ... >>>> Source prepared. >>>> Configuring source in /mnt/gen2/tmpdir/portage/dev-python/cython-0.15.1/work/Cython-0.15.1 ... >>>> Source configured. >>>> Compiling source in /mnt/gen2/tmpdir/portage/dev-python/cython-0.15.1/work/Cython-0.15.1 ... > * Building of dev-python/cython-0.15.1 with CPython 2.5... >python2.5 setup.py build -b build-2.5 >running build >running build_py >creating build-2.5 >creating build-2.5/lib.linux-x86_64-2.5 >creating build-2.5/lib.linux-x86_64-2.5/pyximport >copying pyximport/__init__.py -> build-2.5/lib.linux-x86_64-2.5/pyximport > >---------------------------------------------------------------------------------- >------------------------------------------------------------------------------------ > >compiling (c) and running wundram1 ... Doctest: wundram1 ... ok >compiling (cpp) and running wundram1 ... Doctest: wundram1 ... ok >compiling (cpp) and running cpp_overload_wrapper ... Doctest: cpp_overload_wrapper.DoubleKeeper ... ok >Doctest: cpp_overload_wrapper.__test__.DoubleKeeper.transmogrify (line 37) ... ok >Doctest: cpp_overload_wrapper.__test__.doublefunc (line 54) ... ok >Doctest: cpp_overload_wrapper.__test__.transmogrify_from_cpp (line 61) ... ok >Doctest: cpp_overload_wrapper.__test__.voidfunc (line 48) ... ok >compiling (cpp) and running cpp_references ... Doctest: cpp_references.__test__.test_ref_assign (line 42) ... ok >Doctest: cpp_references.__test__.test_ref_func (line 13) ... ok >Doctest: cpp_references.__test__.test_ref_func_address (line 22) ... ok >Doctest: cpp_references.__test__.test_ref_inference (line 53) ... ok >Doctest: cpp_references.__test__.test_ref_var (line 32) ... ok >compiling (cpp) and running cppwrap ... Doctest: cppwrap.DoubleKeeper ... ok >Doctest: cppwrap.__test__.doublefunc (line 42) ... ok >Doctest: cppwrap.__test__.transmogrify_from_cpp (line 49) ... ok >Doctest: cppwrap.__test__.voidfunc (line 36) ... ok >test_embed (__main__.EmbedTest) ... ok > >====================================================================== >FAIL: Doctest: numpy_test >---------------------------------------------------------------------- >Traceback (most recent call last): > File "/usr/lib64/python2.5/doctest.py", line 2128, in runTest > raise self.failureException(self.format_failure(new.getvalue())) >AssertionError: Failed doctest test for numpy_test > File "/mnt/gen2/tmpdir/portage/dev-python/cython-0.15.1/work/Cython-0.15.1/tests-2.5/run/c/numpy_test.so", line 11, in numpy_test > >---------------------------------------------------------------------- >File "/mnt/gen2/tmpdir/portage/dev-python/cython-0.15.1/work/Cython-0.15.1/tests-2.5/run/c/numpy_test.so", line 202, in numpy_test >Failed example: > print(test_partially_packed_align(np.zeros((1,), dtype=np.dtype([('a', 'b'), ('b', 'i'), ('sub', np.dtype('b,i')), ('c', 'i')], align=True)))) >Exception raised: > Traceback (most recent call last): > File "/usr/lib64/python2.5/doctest.py", line 1228, in __run > compileflags, 1) in test.globs > File "<doctest numpy_test[72]>", line 1, in <module> > print(test_partially_packed_align(np.zeros((1,), dtype=np.dtype([('a', 'b'), ('b', 'i'), ('sub', np.dtype('b,i')), ('c', 'i')], align=True)))) > File "numpy_test.pyx", line 451, in numpy_test.test_partially_packed_align (numpy_test.c:7028) > ValueError: Buffer dtype mismatch; next field is at offset 13 but 16 expected >---------------------------------------------------------------------- >File "/mnt/gen2/tmpdir/portage/dev-python/cython-0.15.1/work/Cython-0.15.1/tests-2.5/run/c/numpy_test.so", line 206, in numpy_test >Failed example: > print(test_partially_packed_align_2(np.zeros((1,), dtype=np.dtype([('a', 'b'), ('b', 'i'), ('c', 'b'), ('sub', np.dtype('b,i', align=True))])))) >Exception raised: > Traceback (most recent call last): > File "/usr/lib64/python2.5/doctest.py", line 1228, in __run > compileflags, 1) in test.globs > File "<doctest numpy_test[73]>", line 1, in <module> > print(test_partially_packed_align_2(np.zeros((1,), dtype=np.dtype([('a', 'b'), ('b', 'i'), ('c', 'b'), ('sub', np.dtype('b,i', align=True))])))) > File "numpy_test.pyx", line 459, in numpy_test.test_partially_packed_align_2 (numpy_test.c:7232) > ValueError: Buffer dtype mismatch; next field is at offset 7 but 10 expected > > >====================================================================== >FAIL: Doctest: numpy_test >---------------------------------------------------------------------- >Traceback (most recent call last): > File "/usr/lib64/python2.5/doctest.py", line 2128, in runTest > raise self.failureException(self.format_failure(new.getvalue())) >AssertionError: Failed doctest test for numpy_test > File "/mnt/gen2/tmpdir/portage/dev-python/cython-0.15.1/work/Cython-0.15.1/tests-2.5/run/cpp/numpy_test.so", line 10, in numpy_test > >---------------------------------------------------------------------- >File "/mnt/gen2/tmpdir/portage/dev-python/cython-0.15.1/work/Cython-0.15.1/tests-2.5/run/cpp/numpy_test.so", line 201, in numpy_test >Failed example: > print(test_partially_packed_align(np.zeros((1,), dtype=np.dtype([('a', 'b'), ('b', 'i'), ('sub', np.dtype('b,i')), ('c', 'i')], align=True)))) >Exception raised: > Traceback (most recent call last): > File "/usr/lib64/python2.5/doctest.py", line 1228, in __run > compileflags, 1) in test.globs > File "<doctest numpy_test[72]>", line 1, in <module> > print(test_partially_packed_align(np.zeros((1,), dtype=np.dtype([('a', 'b'), ('b', 'i'), ('sub', np.dtype('b,i')), ('c', 'i')], align=True)))) > File "numpy_test.pyx", line 451, in numpy_test.test_partially_packed_align (numpy_test.cpp:7028) > ValueError: Buffer dtype mismatch; next field is at offset 13 but 16 expected >---------------------------------------------------------------------- >File "/mnt/gen2/tmpdir/portage/dev-python/cython-0.15.1/work/Cython-0.15.1/tests-2.5/run/cpp/numpy_test.so", line 205, in numpy_test >Failed example: > print(test_partially_packed_align_2(np.zeros((1,), dtype=np.dtype([('a', 'b'), ('b', 'i'), ('c', 'b'), ('sub', np.dtype('b,i', align=True))])))) >Exception raised: > Traceback (most recent call last): > File "/usr/lib64/python2.5/doctest.py", line 1228, in __run > compileflags, 1) in test.globs > File "<doctest numpy_test[73]>", line 1, in <module> > print(test_partially_packed_align_2(np.zeros((1,), dtype=np.dtype([('a', 'b'), ('b', 'i'), ('c', 'b'), ('sub', np.dtype('b,i', align=True))])))) > File "numpy_test.pyx", line 459, in numpy_test.test_partially_packed_align_2 (numpy_test.cpp:7232) > ValueError: Buffer dtype mismatch; next field is at offset 7 but 10 expected > > >---------------------------------------------------------------------- >Ran 5413 tests in 1391.118s > >FAILED (failures=2) >[?1034hALL DONE > [31;01m*[0m ERROR: dev-python/cython-0.15.1 failed (test phase): > [31;01m*[0m Testing failed with CPython 2.5 in testing() function > [31;01m*[0m > [31;01m*[0m Call stack: > [31;01m*[0m ebuild.sh, line 56: Called src_test > [31;01m*[0m environment, line 3997: Called python_execute_function 'testing' > [31;01m*[0m environment, line 2241: Called die > [31;01m*[0m The specific snippet of code: > [31;01m*[0m die "${_python[failure_message]}"; > [31;01m*[0m > [31;01m*[0m If you need support, post the output of 'emerge --info =dev-python/cython-0.15.1', > [31;01m*[0m the complete build log and the output of 'emerge -pqv =dev-python/cython-0.15.1'. > [31;01m*[0m This ebuild used the following eclasses from overlays: > [31;01m*[0m /var/lib/layman/progress/eclass/distutils.eclass > [31;01m*[0m /var/lib/layman/progress/eclass/python.eclass > [31;01m*[0m This ebuild is from an overlay named 'progress': '/var/lib/layman/progress/' > [31;01m*[0m The complete build log is located at '/home/testuser/documents/build/dev-python/cython-0.15.1:20111203-212423.log'. > [31;01m*[0m The ebuild environment file is located at '/mnt/gen2/tmpdir/portage/dev-python/cython-0.15.1/temp/environment'. > [31;01m*[0m S: '/mnt/gen2/tmpdir/portage/dev-python/cython-0.15.1/work/Cython-0.15.1'
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bug 351206
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259369
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266661
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266665
| 295103