build log

build.log (text/plain), 8.08 KB, created by Helmut Jarausch on 2011-10-10 08:11:10 UTC

 * Package:    sci-libs/scipy-0.9.0-r2
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        amd64 elibc_glibc kernel_linux multilib userland_GNU
 * FEATURES:   preserve-libs sandbox splitdebug
>>> [1m[37mcfg-update-1.8.2-r1[0m[0m: Skipping checksum index updating...
>>> Unpacking source...
>>> Unpacking scipy-0.9.0.tar.gz to /var/tmp/portage/sci-libs/scipy-0.9.0-r2/work
>>> Source unpacked in /var/tmp/portage/sci-libs/scipy-0.9.0-r2/work
>>> Preparing source in /var/tmp/portage/sci-libs/scipy-0.9.0-r2/work/scipy-0.9.0 ...
 * Applying scipy-0.9.0-superlu.patch ...
 [ ok ]
 * Applying scipy-0.9.0-qhull.patch ...
 [ ok ]
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-libs/scipy-0.9.0-r2/work/scipy-0.9.0 ...
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-libs/scipy-0.9.0-r2/work/scipy-0.9.0 ...
 * Building of sci-libs/scipy-0.9.0-r2 with CPython 2.7...
python2.7 setup.py build -b build-2.7 config_fc --noopt --noarch
Warning: No configuration returned, assuming unavailable.[39mblas_opt_info:[0m
[39mblas_mkl_info:[0m
[39m  libraries mkl,vml,guide not found in /usr/local/lib64[0m
[39m  libraries mkl,vml,guide not found in /usr/local/lib[0m
[39m  libraries mkl,vml,guide not found in /usr/lib64[0m
[39m  libraries mkl,vml,guide not found in /usr/lib[0m
[39m  NOT AVAILABLE[0m
[39m[0m
[39matlas_blas_threads_info:[0m
[39mSetting PTATLAS=ATLAS[0m
[39m  libraries blas,cblas,atlas not found in /usr/local/lib64[0m
[39m  libraries blas,cblas,atlas not found in /usr/local/lib[0m
[39mSetting PTATLAS=ATLAS[0m
[39mSetting PTATLAS=ATLAS[0m
[39m  FOUND:[0m
[39m    libraries = ['blas', 'cblas', 'atlas'][0m
[39m    library_dirs = ['/usr/lib64'][0m
[39m    language = c[0m
[39m    include_dirs = ['/usr/include/atlas'][0m
[39m[0m
[39m  FOUND:[0m
[39m    libraries = ['blas', 'cblas', 'atlas'][0m
[39m    library_dirs = ['/usr/lib64'][0m
[39m    language = c[0m
[39m    include_dirs = ['/usr/include/atlas'][0m
[39m[0m
non-existing path in 'scipy/io': 'docs'
[39mlapack_opt_info:[0m
[39mlapack_mkl_info:[0m
[39mmkl_info:[0m
[39m  libraries mkl,vml,guide not found in /usr/local/lib64[0m
[39m  libraries mkl,vml,guide not found in /usr/local/lib[0m
[39m  libraries mkl,vml,guide not found in /usr/lib64[0m
[39m  libraries mkl,vml,guide not found in /usr/lib[0m
[39m  NOT AVAILABLE[0m
[39m[0m
[39m  NOT AVAILABLE[0m
[39m[0m
[39matlas_threads_info:[0m
[39mSetting PTATLAS=ATLAS[0m
[39m  libraries blas,cblas,atlas not found in /usr/local/lib64[0m
[39m  libraries lapack not found in /usr/local/lib64[0m
[39m  libraries blas,cblas,atlas not found in /usr/local/lib[0m
[39m  libraries lapack not found in /usr/local/lib[0m
[39m  libraries lapack not found in /usr/lib64[0m
[39m  libraries lapack not found in /usr/lib64[0m
[39m  libraries lapack not found in /usr/lib[0m
[39m  libraries lapack not found in /usr/lib[0m
[39mnumpy.distutils.system_info.atlas_threads_info[0m
[39mSetting PTATLAS=ATLAS[0m
/usr/lib64/python2.7/site-packages/numpy/distutils/system_info.py:980: UserWarning: 
*********************************************************************
    Could not find lapack library within the ATLAS installation.
*********************************************************************

  warnings.warn(message)
[39mSetting PTATLAS=ATLAS[0m
[39m  FOUND:[0m
[39m    libraries = ['blas', 'cblas', 'atlas'][0m
[39m    library_dirs = ['/usr/lib'][0m
[39m    language = c[0m
[39m    define_macros = [('ATLAS_WITHOUT_LAPACK', None)][0m
[39m    include_dirs = ['/usr/include/atlas'][0m
[39m[0m
[39mlapack_info:[0m
[39m  libraries lapack,blas,atlas,cblas not found in /usr/lib64/lapack/atlas[0m
[39m  libraries lapack,blas,atlas,cblas not found in /usr/lib64/blas/threaded-atlas[0m
[39m  libraries lapack,blas,atlas,cblas not found in /usr/lib64[0m
[39m  NOT AVAILABLE[0m
[39m[0m
/usr/lib64/python2.7/site-packages/numpy/distutils/system_info.py:1335: UserWarning: 
    Lapack (http://www.netlib.org/lapack/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [lapack]) or by setting
    the LAPACK environment variable.
  warnings.warn(LapackNotFoundError.__doc__)
[39mlapack_src_info:[0m
[39m  NOT AVAILABLE[0m
[39m[0m
/usr/lib64/python2.7/site-packages/numpy/distutils/system_info.py:1338: UserWarning: 
    Lapack (http://www.netlib.org/lapack/) sources not found.
    Directories to search for the sources can be specified in the
    numpy/distutils/site.cfg file (section [lapack_src]) or by setting
    the LAPACK_SRC environment variable.
  warnings.warn(LapackSrcNotFoundError.__doc__)
Traceback (most recent call last):
  File "setup.py", line 181, in <module>
    setup_package()
  File "setup.py", line 173, in setup_package
    configuration=configuration )
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/core.py", line 152, in setup
    config = configuration()
  File "setup.py", line 122, in configuration
    config.add_subpackage('scipy')
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage
    caller_level = 2)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage
    caller_level = caller_level + 1)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py
    config = setup_module.configuration(*args)
  File "scipy/setup.py", line 11, in configuration
    config.add_subpackage('lib')
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage
    caller_level = 2)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage
    caller_level = caller_level + 1)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py
    config = setup_module.configuration(*args)
  File "scipy/lib/setup.py", line 8, in configuration
    config.add_subpackage('lapack')
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage
    caller_level = 2)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage
    caller_level = caller_level + 1)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py
    config = setup_module.configuration(*args)
  File "scipy/lib/lapack/setup.py", line 32, in configuration
    lapack_opt = get_info('lapack_opt',notfound_action=2)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/system_info.py", line 311, in get_info
    return cl().get_info(notfound_action)
  File "/usr/lib64/python2.7/site-packages/numpy/distutils/system_info.py", line 462, in get_info
    raise self.notfounderror(self.notfounderror.__doc__)
numpy.distutils.system_info.LapackNotFoundError: 
    Lapack (http://www.netlib.org/lapack/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [lapack]) or by setting
    the LAPACK environment variable.
 * ERROR: sci-libs/scipy-0.9.0-r2 failed (compile phase):
 *   Building failed with CPython 2.7 in distutils_building() function
 * 
 * Call stack:
 *     ebuild.sh, line   91:  Called src_compile
 *   environment, line 5971:  Called distutils_src_compile 'config_fc' '--noopt' '--noarch'
 *   environment, line 1728:  Called python_execute_function 'distutils_building' 'config_fc' '--noopt' '--noarch'
 *   environment, line 4192:  Called die
 * The specific snippet of code:
 *                       die "${failure_message}";
 * 
 * If you need support, post the output of 'emerge --info =sci-libs/scipy-0.9.0-r2',
 * the complete build log and the output of 'emerge -pqv =sci-libs/scipy-0.9.0-r2'.
 * The complete build log is located at '/var/tmp/portage/sci-libs/scipy-0.9.0-r2/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-libs/scipy-0.9.0-r2/temp/environment'.
 * S: '/var/tmp/portage/sci-libs/scipy-0.9.0-r2/work/scipy-0.9.0'