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Gentoo's Bugzilla – Attachment 256825 Details for
Bug 348354
[GCC 4.5/graphite] sci-chemistry/mgltools-qslimlib-1.5.4-r1 failed to build with graphite
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/var/tmp/portage/sci-chemistry/mgltools-qslimlib-1.5.4-r1/temp/build.log
build.log (text/plain), 12.63 KB, created by
Alexey Shvetsov
on 2010-12-10 11:24:33 UTC
(
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Description:
/var/tmp/portage/sci-chemistry/mgltools-qslimlib-1.5.4-r1/temp/build.log
Filename:
MIME Type:
Creator:
Alexey Shvetsov
Created:
2010-12-10 11:24:33 UTC
Size:
12.63 KB
patch
obsolete
>[32;01m * [39;49;00mPackage: sci-chemistry/mgltools-qslimlib-1.5.4-r1 >[32;01m * [39;49;00mRepository: science >[32;01m * [39;49;00mMaintainer: sci@gentoo.org >[32;01m * [39;49;00mUSE: amd64 elibc_glibc kernel_linux multilib userland_GNU >>>> Unpacking source... >>>> Source unpacked in /var/tmp/portage/sci-chemistry/mgltools-qslimlib-1.5.4-r1/work >>>> Preparing source in /var/tmp/portage/sci-chemistry/mgltools-qslimlib-1.5.4-r1/work/QSlimLib-1.5.4 ... > [32;01m*[0m Applying 1.5.4-gcc4.3.patch ... >[A[172C [34;01m[ [32;01mok[34;01m ][0m >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-chemistry/mgltools-qslimlib-1.5.4-r1/work/QSlimLib-1.5.4 ... >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-chemistry/mgltools-qslimlib-1.5.4-r1/work/QSlimLib-1.5.4 ... > * Building of sci-chemistry/mgltools-qslimlib-1.5.4-r1 with CPython 2.6... >python2.6 setup.py build -b build-2.6 >running build >sh: ./configure: No such file or directory >running ./configure >running build_clib >building 'mix' library >creating build-2.6 >creating build-2.6/temp.linux-x86_64-2.6 >creating build-2.6/temp.linux-x86_64-2.6/src >creating build-2.6/temp.linux-x86_64-2.6/src/mixkit >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/mixmsg.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/mixmsg.o >src/mixkit/mixmsg.cxx:124:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/mixmsg.cxx:124:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/mixmsg.cxx:124:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/mixmsg.cxx:124:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/mixmsg.cxx:124:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/mixmsg.cxx:124:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/mixmsg.cxx:124:1: warning: deprecated conversion from string constant to âchar*â >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxCmdParser.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxCmdParser.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxAsp.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxAsp.o >src/mixkit/MxAsp.cxx:279:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxAsp.cxx:279:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxAsp.cxx:279:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxAsp.cxx:279:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxAsp.cxx:279:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxAsp.cxx:279:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxAsp.cxx:279:1: warning: deprecated conversion from string constant to âchar*â >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxMat3-jacobi.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxMat3-jacobi.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxMat4-jacobi.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxMat4-jacobi.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxGeom3D.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxGeom3D.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxTriProject.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxTriProject.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxFrame.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxFrame.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxFitFrame.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxFitFrame.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxFitFrame-2.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxFitFrame-2.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxGeom2D.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxGeom2D.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/mixmops.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/mixmops.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxBlockModel.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxBlockModel.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxStdModel.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxStdModel.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxSMF.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxSMF.o >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >src/mixkit/MxSMF.cxx:46:1: warning: deprecated conversion from string constant to âchar*â >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxQMetric3.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxQMetric3.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxQSlim.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxQSlim.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxStdSlim.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxStdSlim.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxQMetric.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxQMetric.o >x86_64-pc-linux-gnu-g++ -pthread -O2 -pipe -march=native -mtune=native -mfpmath=sse -msse4.1 -floop-interchange -floop-strip-mine -floop-block -floop-parallelize-all -fPIC -DHAVE_CONFIG_H -Isrc/libgfx/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -Isrc/mixkit -c src/mixkit/MxPropSlim.cxx -o build-2.6/temp.linux-x86_64-2.6/src/mixkit/MxPropSlim.o >src/mixkit/MxPropSlim.cxx: In member function âvoid MxPropSlim::compute_target_placement(MxPropSlim::edge_info*)â: >src/mixkit/MxPropSlim.cxx:305:6: internal compiler error: in remove_unreachable_handlers, at tree-eh.c:3294 >Please submit a full bug report, >with preprocessed source if appropriate. >See <http://bugs.gentoo.org/> for instructions. >error: command 'x86_64-pc-linux-gnu-g++' failed with exit status 1 > [31;01m*[0m ERROR: sci-chemistry/mgltools-qslimlib-1.5.4-r1 failed: > [31;01m*[0m Building failed with CPython 2.6 in distutils_building() function > [31;01m*[0m > [31;01m*[0m Call stack: > [31;01m*[0m ebuild.sh, line 56: Called src_compile > [31;01m*[0m environment, line 4755: Called distutils_src_compile > [31;01m*[0m environment, line 1283: Called python_execute_function 'distutils_building' > [31;01m*[0m environment, line 3503: Called die > [31;01m*[0m The specific snippet of code: > [31;01m*[0m die "${failure_message}"; > [31;01m*[0m > [31;01m*[0m If you need support, post the output of 'emerge --info =sci-chemistry/mgltools-qslimlib-1.5.4-r1', > [31;01m*[0m the complete build log and the output of 'emerge -pqv =sci-chemistry/mgltools-qslimlib-1.5.4-r1'. > [31;01m*[0m This ebuild is from an overlay named 'science': '/var/lib/layman/science/' > [31;01m*[0m The complete build log is located at '/var/tmp/portage/sci-chemistry/mgltools-qslimlib-1.5.4-r1/temp/build.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-chemistry/mgltools-qslimlib-1.5.4-r1/temp/environment'. > [31;01m*[0m S: '/var/tmp/portage/sci-chemistry/mgltools-qslimlib-1.5.4-r1/work/QSlimLib-1.5.4'
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bug 348354
: 256825