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Gentoo's Bugzilla – Attachment 248187 Details for
Bug 309127
sci-biology/vaal-1.2-r1: Failed to resolve boost library name
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build.log from 1.6
build.log (text/plain), 23.64 KB, created by
Martin Mokrejš
on 2010-09-20 18:51:38 UTC
(
hide
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Description:
build.log from 1.6
Filename:
MIME Type:
Creator:
Martin Mokrejš
Created:
2010-09-20 18:51:38 UTC
Size:
23.64 KB
patch
obsolete
> [32;01m*[0m CPV: sci-biology/vaal-1.6 > [32;01m*[0m REPO: gentoo > [32;01m*[0m USE: elibc_glibc kernel_linux userland_GNU x86 >>>> Unpacking source... >>>> Unpacking VAAL.1.6.tgz to /var/tmp/portage/sci-biology/vaal-1.6/work >>>> Unpacking VAAL_manual.doc to /var/tmp/portage/sci-biology/vaal-1.6/work >unpack VAAL_manual.doc: file format not recognized. Ignoring. >>>> Source unpacked in /var/tmp/portage/sci-biology/vaal-1.6/work >>>> Preparing source in /var/tmp/portage/sci-biology/vaal-1.6/work/vaal-33805 ... > [32;01m*[0m Applying vaal-1.6-respect-flags.patch ... >[A[222C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running eautoreconf in '/var/tmp/portage/sci-biology/vaal-1.6/work/vaal-33805' ... > [32;01m*[0m Running aclocal -I m4 ... >[A[222C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running libtoolize --copy --force --install --automake ... >[A[222C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running aclocal -I m4 ... >[A[222C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running autoconf ... >[A[222C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running autoheader ... >[A[222C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running automake --add-missing --copy --foreign ... >[A[222C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running elibtoolize in: vaal-33805/ > [32;01m*[0m Applying portage-2.2.patch ... > [32;01m*[0m Applying sed-1.5.6.patch ... > [32;01m*[0m Applying as-needed-2.2.6.patch ... >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-biology/vaal-1.6/work/vaal-33805 ... > * econf: updating vaal-33805/config.guess with /usr/share/gnuconfig/config.guess > * econf: updating vaal-33805/config.sub with /usr/share/gnuconfig/config.sub >./configure --prefix=/usr --build=i686-pc-linux-gnu --host=i686-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib >checking for a BSD-compatible install... /usr/bin/install -c >checking whether build environment is sane... yes >checking for a thread-safe mkdir -p... /bin/mkdir -p >checking for gawk... gawk >checking whether make sets $(MAKE)... yes >checking build system type... i686-pc-linux-gnu >checking host system type... i686-pc-linux-gnu >checking how to print strings... printf >checking for style of include used by make... GNU >checking for i686-pc-linux-gnu-gcc... i686-pc-linux-gnu-gcc >checking whether the C compiler works... yes >checking for C compiler default output file name... a.out >checking for suffix of executables... >checking whether we are cross compiling... no >checking for suffix of object files... o >checking whether we are using the GNU C compiler... yes >checking whether i686-pc-linux-gnu-gcc accepts -g... yes >checking for i686-pc-linux-gnu-gcc option to accept ISO C89... none needed >checking dependency style of i686-pc-linux-gnu-gcc... gcc3 >checking for a sed that does not truncate output... /usr/bin/sed >checking for grep that handles long lines and -e... /bin/grep >checking for egrep... /bin/grep -E >checking for fgrep... /bin/grep -F >checking for ld used by i686-pc-linux-gnu-gcc... /usr/i686-pc-linux-gnu/bin/ld >checking if the linker (/usr/i686-pc-linux-gnu/bin/ld) is GNU ld... yes >checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B >checking the name lister (/usr/bin/nm -B) interface... BSD nm >checking whether ln -s works... yes >checking the maximum length of command line arguments... 1572864 >checking whether the shell understands some XSI constructs... yes >checking whether the shell understands "+="... yes >checking for /usr/i686-pc-linux-gnu/bin/ld option to reload object files... -r >checking for i686-pc-linux-gnu-objdump... i686-pc-linux-gnu-objdump >checking how to recognize dependent libraries... pass_all >checking for i686-pc-linux-gnu-ar... i686-pc-linux-gnu-ar >checking for i686-pc-linux-gnu-strip... i686-pc-linux-gnu-strip >checking for i686-pc-linux-gnu-ranlib... i686-pc-linux-gnu-ranlib >checking command to parse /usr/bin/nm -B output from i686-pc-linux-gnu-gcc object... ok >checking how to run the C preprocessor... i686-pc-linux-gnu-gcc -E >checking for ANSI C header files... yes >checking for sys/types.h... yes >checking for sys/stat.h... yes >checking for stdlib.h... yes >checking for string.h... yes >checking for memory.h... yes >checking for strings.h... yes >checking for inttypes.h... yes >checking for stdint.h... yes >checking for unistd.h... yes >checking for dlfcn.h... yes >checking for objdir... .libs >checking if i686-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no >checking for i686-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC >checking if i686-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes >checking if i686-pc-linux-gnu-gcc static flag -static works... yes >checking if i686-pc-linux-gnu-gcc supports -c -o file.o... yes >checking if i686-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes >checking whether the i686-pc-linux-gnu-gcc linker (/usr/i686-pc-linux-gnu/bin/ld) supports shared libraries... yes >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking whether stripping libraries is possible... yes >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... no >checking whether to build static libraries... yes >checking for i686-pc-linux-gnu-g++... i686-pc-linux-gnu-g++ >checking whether we are using the GNU C++ compiler... yes >checking whether i686-pc-linux-gnu-g++ accepts -g... yes >checking dependency style of i686-pc-linux-gnu-g++... gcc3 >checking how to run the C++ preprocessor... i686-pc-linux-gnu-g++ -E >checking for ld used by i686-pc-linux-gnu-g++... /usr/i686-pc-linux-gnu/bin/ld >checking if the linker (/usr/i686-pc-linux-gnu/bin/ld) is GNU ld... yes >checking whether the i686-pc-linux-gnu-g++ linker (/usr/i686-pc-linux-gnu/bin/ld) supports shared libraries... yes >checking for i686-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC >checking if i686-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes >checking if i686-pc-linux-gnu-g++ static flag -static works... yes >checking if i686-pc-linux-gnu-g++ supports -c -o file.o... yes >checking if i686-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes >checking whether the i686-pc-linux-gnu-g++ linker (/usr/i686-pc-linux-gnu/bin/ld) supports shared libraries... yes >checking dynamic linker characteristics... (cached) GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking whether byte ordering is bigendian... no >g++ version is >= 4.3.3... yes >checking for Boost headers version >= 103800... yes >checking for Boost's header version... 1_42 >checking for the pthreads library -lpthreads... no >checking whether pthreads work without any flags... no >checking whether pthreads work with -Kthread... no >checking whether pthreads work with -kthread... no >checking for the pthreads library -llthread... no >checking whether pthreads work with -pthread... yes >checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE >checking if more special flags are required for pthreads... no >checking for i686-pc-linux-gnu-gcc option to support OpenMP... -fopenmp >checking validity of OpenMP configuation.... configure: creating ./config.status >config.status: creating Makefile >config.status: creating src/Makefile >config.status: creating src/config.h >config.status: executing depfiles commands >config.status: executing libtool commands >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-biology/vaal-1.6/work/vaal-33805 ... >make -j4 >Making all in src >make[1]: Entering directory `/var/tmp/portage/sci-biology/vaal-1.6/work/vaal-33805/src' >(CDPATH="${ZSH_VERSION+.}:" && cd .. && /bin/sh /var/tmp/portage/sci-biology/vaal-1.6/work/vaal-33805/missing --run autoheader) >rm -f stamp-h1 >touch config.h.in >cd .. && /bin/sh ./config.status src/config.h >config.status: creating src/config.h >config.status: src/config.h is unchanged >make all-am >make[2]: Entering directory `/var/tmp/portage/sci-biology/vaal-1.6/work/vaal-33805/src' >i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DRELEASE=3.0 -DMAKE_OS_RELEASE=2.6.31.14 -DMAKE_RELEASE=3.0 -DSVN_VERSION=33805 -fopenmp -O2 -march=pentium4 -mmmx -msse -msse2 -pipe -fno-strict-aliasing -ggdb -imacros config.h -Wextra -Wall -Wno-unused -ansi -pedantic -Wno-long-long -Wsign-promo -Woverloaded-virtual -Wendif-labels -O3 -ggdb3 -ftemplate-depth-50 -Wno-deprecated -Wno-parentheses -fno-strict-aliasing -mieee-fp -iquote . -MT Crash.o -MD -MP -MF .deps/Crash.Tpo -c -o Crash.o `test -f 'system/Crash.cc' || echo './'`system/Crash.cc >i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DRELEASE=3.0 -DMAKE_OS_RELEASE=2.6.31.14 -DMAKE_RELEASE=3.0 -DSVN_VERSION=33805 -fopenmp -O2 -march=pentium4 -mmmx -msse -msse2 -pipe -fno-strict-aliasing -ggdb -imacros config.h -Wextra -Wall -Wno-unused -ansi -pedantic -Wno-long-long -Wsign-promo -Woverloaded-virtual -Wendif-labels -O3 -ggdb3 -ftemplate-depth-50 -Wno-deprecated -Wno-parentheses -fno-strict-aliasing -mieee-fp -iquote . -MT Mutmer.o -MD -MP -MF .deps/Mutmer.Tpo -c -o Mutmer.o `test -f 'pairwise_aligners/Mutmer.cc' || echo './'`pairwise_aligners/Mutmer.cc >i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DRELEASE=3.0 -DMAKE_OS_RELEASE=2.6.31.14 -DMAKE_RELEASE=3.0 -DSVN_VERSION=33805 -fopenmp -O2 -march=pentium4 -mmmx -msse -msse2 -pipe -fno-strict-aliasing -ggdb -imacros config.h -Wextra -Wall -Wno-unused -ansi -pedantic -Wno-long-long -Wsign-promo -Woverloaded-virtual -Wendif-labels -O3 -ggdb3 -ftemplate-depth-50 -Wno-deprecated -Wno-parentheses -fno-strict-aliasing -mieee-fp -iquote . -MT Generic.o -MD -MP -MF .deps/Generic.Tpo -c -o Generic.o `test -f 'feudal/Generic.cc' || echo './'`feudal/Generic.cc >i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DRELEASE=3.0 -DMAKE_OS_RELEASE=2.6.31.14 -DMAKE_RELEASE=3.0 -DSVN_VERSION=33805 -fopenmp -O2 -march=pentium4 -mmmx -msse -msse2 -pipe -fno-strict-aliasing -ggdb -imacros config.h -Wextra -Wall -Wno-unused -ansi -pedantic -Wno-long-long -Wsign-promo -Woverloaded-virtual -Wendif-labels -O3 -ggdb3 -ftemplate-depth-50 -Wno-deprecated -Wno-parentheses -fno-strict-aliasing -mieee-fp -iquote . -MT ReadPairing.o -MD -MP -MF .deps/ReadPairing.Tpo -c -o ReadPairing.o ReadPairing.cc >distcc[9434] ERROR: nonblocking connect to 127.0.0.1:3632 failed: Connection refused >distcc[9434] Warning: failed to distribute pairwise_aligners/Mutmer.cc to 127.0.0.1, running locally instead >mv -f .deps/Crash.Tpo .deps/Crash.Po >i686-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -DRELEASE=3.0 -DMAKE_OS_RELEASE=2.6.31.14 -DMAKE_RELEASE=3.0 -DSVN_VERSION=33805 -fopenmp -O2 -march=pentium4 -mmmx -msse -msse2 -pipe -fno-strict-aliasing -ggdb -imacros config.h -Wextra -Wall -Wno-unused -ansi -pedantic -Wno-long-long -Wsign-promo -Woverloaded-virtual -Wendif-labels -O3 -ggdb3 -ftemplate-depth-50 -Wno-deprecated -Wno-parentheses -fno-strict-aliasing -mieee-fp -iquote . -MT FetchReadsAmb.o -MD -MP -MF .deps/FetchReadsAmb.Tpo -c -o FetchReadsAmb.o FetchReadsAmb.cc >In file included from ./feudal/FeudalString.h:29, > from ./feudal/CharString.h:19, > from ./String.h:13, > from ./system/System.h:16, > from ./CoreTools.h:17, > from ./feudal/FieldVec.h:20, > from ./feudal/BaseVec.h:13, > from ./Basevector.h:12, > from ./pairwise_aligners/Mutmer.h:33, > from pairwise_aligners/Mutmer.cc:9: >./feudal/SmallVec.h:443: warning: integer constant is too large for âlongâ type >In file included from ./feudal/BaseVec.h:13, > from ./Basevector.h:12, > from ./pairwise_aligners/Mutmer.h:33, > from pairwise_aligners/Mutmer.cc:9: >./feudal/FieldVec.h:752: warning: integer constant is too large for âlongâ type >In file included from ./feudal/FeudalString.h:29, > from ./feudal/CharString.h:19, > from ./String.h:13, > from ./system/System.h:16, > from ./CoreTools.h:17, > from ./feudal/FieldVec.h:20, > from ./feudal/BaseVec.h:13, > from ./Basevector.h:12, > from ./pairwise_aligners/Mutmer.h:33, > from pairwise_aligners/Mutmer.cc:9: >./feudal/SmallVec.h:443: warning: large integer implicitly truncated to unsigned type >In file included from ./feudal/MasterVec.h:24, > from ./VecString.h:14, > from ./CoreTools.h:22, > from ./feudal/FieldVec.h:20, > from ./feudal/BaseVec.h:13, > from ./Basevector.h:12, > from ./pairwise_aligners/Mutmer.h:33, > from pairwise_aligners/Mutmer.cc:9: >./feudal/OuterVec.h: In member function âsize_t OuterVec<T, A>::max_size() constâ: >./feudal/OuterVec.h:196: warning: left shift count >= width of type >In file included from ./feudal/BaseVec.h:13, > from ./Basevector.h:12, > from ./pairwise_aligners/Mutmer.h:33, > from pairwise_aligners/Mutmer.cc:9: >./feudal/FieldVec.h: At global scope: >./feudal/FieldVec.h:752: warning: large integer implicitly truncated to unsigned type >./feudal/FieldVec.h: In member function âFieldVec<N, A>& FieldVec<N, A>::push_back(unsigned char, float, unsigned int) [with int N = 2, A = MempoolAllocator<unsigned char>]â: >./feudal/FieldVec.h:494: instantiated from âFieldVec<N, A>& FieldVec<N, A>::push_back(unsigned char) [with int N = 2, A = MempoolAllocator<unsigned char>]â >./feudal/BaseVec.h:184: instantiated from here >./feudal/FieldVec.h:506: error: no matching function for call to âmax(long unsigned int, const unsigned int&)â >In file included from ./feudal/FeudalString.h:29, > from ./feudal/CharString.h:19, > from ./String.h:13, > from ./system/System.h:16, > from ./CoreTools.h:17, > from ./feudal/FieldVec.h:20, > from ./feudal/BaseVec.h:13, > from ./Basevector.h:12, > from ./pairwise_aligners/Mutmer.h:33, > from pairwise_aligners/Mutmer.cc:9: >./feudal/SmallVec.h: In member function âSmallVec<T, A>& SmallVec<T, A>::push_back(const T&, float, unsigned int) [with T = char, A = MempoolAllocator<char>]â: >./feudal/SmallVec.h:215: instantiated from âSmallVec<T, A>& SmallVec<T, A>::push_back(const T&) [with T = char, A = MempoolAllocator<char>]â >./Fastavector.h:59: instantiated from here >./feudal/SmallVec.h:226: error: no matching function for call to âmax(long unsigned int, const unsigned int&)â >distcc[9434] ERROR: compile pairwise_aligners/Mutmer.cc on localhost failed >make[2]: *** [Mutmer.o] Error 1 >make[2]: *** Waiting for unfinished jobs.... >distcc[9435] ERROR: compile feudal/Generic.cc on 195.113.57.236 failed >distcc[9435] (dcc_build_somewhere) Warning: remote compilation of 'feudal/Generic.cc' failed, retrying locally >distcc[9435] Warning: failed to distribute feudal/Generic.cc to 195.113.57.236, running locally instead >In file included from ./feudal/FeudalString.h:29, > from ./feudal/CharString.h:19, > from ./String.h:13, > from feudal/Generic.cc:20: >./feudal/SmallVec.h:443: warning: integer constant is too large for âlongâ type >./feudal/SmallVec.h:443: warning: large integer implicitly truncated to unsigned type >./feudal/SmallVec.h: In member function âSmallVec<T, A>& SmallVec<T, A>::push_back(const T&, float, unsigned int) [with T = char, A = MempoolAllocator<char>]â: >./feudal/SmallVec.h:215: instantiated from âSmallVec<T, A>& SmallVec<T, A>::push_back(const T&) [with T = char, A = MempoolAllocator<char>]â >./feudal/FeudalString.h:183: instantiated from âFeudalString<charT, Traits>& FeudalString<charT, Traits>::push_back(charT) [with charT = char, Traits = std::char_traits<char>]â >./feudal/CharString.h:148: instantiated from here >./feudal/SmallVec.h:226: error: no matching function for call to âmax(long unsigned int, const unsigned int&)â >distcc[9435] ERROR: compile feudal/Generic.cc on localhost failed >make[2]: *** [Generic.o] Error 1 >distcc[9436] ERROR: compile ReadPairing.cc on 192.168.251.1,lzo failed >distcc[9436] (dcc_build_somewhere) Warning: remote compilation of 'ReadPairing.cc' failed, retrying locally >distcc[9436] Warning: failed to distribute ReadPairing.cc to 192.168.251.1,lzo, running locally instead >In file included from ./feudal/FeudalString.h:29, > from ./feudal/CharString.h:19, > from ./String.h:13, > from system/System.h:16, > from CoreTools.h:17, > from ReadPairing.cc:14: >./feudal/SmallVec.h:443: warning: integer constant is too large for âlongâ type >In file included from ./feudal/FeudalString.h:29, > from ./feudal/CharString.h:19, > from ./String.h:13, > from system/System.h:16, > from CoreTools.h:17, > from ReadPairing.cc:14: >./feudal/SmallVec.h:443: warning: large integer implicitly truncated to unsigned type >In file included from feudal/MasterVec.h:24, > from VecString.h:14, > from CoreTools.h:22, > from ReadPairing.cc:14: >./feudal/OuterVec.h: In member function âsize_t OuterVec<T, A>::max_size() constâ: >./feudal/OuterVec.h:196: warning: left shift count >= width of type >ReadPairing.cc: In function âvoid ReadsToPairs(const String&, const vec<int>&, vec<read_pairing>&, const String&)â: >ReadPairing.cc:115: warning: ignoring return value of âssize_t read(int, void*, size_t)â, declared with attribute warn_unused_result >In file included from CoreTools.h:20, > from ReadPairing.cc:14: >Vec.h: In function âvoid BinaryReadSubset(const String&, const vec<int>&, vec<T>&) [with T = int]â: >ReadPairing.cc:105: instantiated from here >Vec.h:872: warning: ignoring return value of âssize_t read(int, void*, size_t)â, declared with attribute warn_unused_result >In file included from ./feudal/FeudalString.h:29, > from ./feudal/CharString.h:19, > from ./String.h:13, > from system/System.h:16, > from CoreTools.h:17, > from ReadPairing.cc:14: >./feudal/SmallVec.h: In member function âSmallVec<T, A>& SmallVec<T, A>::push_back(const T&, float, unsigned int) [with T = char, A = MempoolAllocator<char>]â: >./feudal/SmallVec.h:215: instantiated from âSmallVec<T, A>& SmallVec<T, A>::push_back(const T&) [with T = char, A = MempoolAllocator<char>]â >./feudal/FeudalString.h:183: instantiated from âFeudalString<charT, Traits>& FeudalString<charT, Traits>::push_back(charT) [with charT = char, Traits = std::char_traits<char>]â >./feudal/CharString.h:148: instantiated from here >./feudal/SmallVec.h:226: error: no matching function for call to âmax(long unsigned int, const unsigned int&)â >distcc[9436] ERROR: compile ReadPairing.cc on localhost failed >make[2]: *** [ReadPairing.o] Error 1 >distcc[9451] ERROR: compile FetchReadsAmb.cc on 195.113.57.236 failed >distcc[9451] (dcc_build_somewhere) Warning: remote compilation of 'FetchReadsAmb.cc' failed, retrying locally >distcc[9451] Warning: failed to distribute FetchReadsAmb.cc to 195.113.57.236, running locally instead >In file included from ./feudal/FeudalString.h:29, > from ./feudal/CharString.h:19, > from ./String.h:13, > from ./system/System.h:16, > from ./CoreTools.h:17, > from ./feudal/FieldVec.h:20, > from feudal/BitVec.h:12, > from Bitvector.h:12, > from FetchReadsAmb.cc:22: >./feudal/SmallVec.h:443: warning: integer constant is too large for âlongâ type >In file included from feudal/BitVec.h:12, > from Bitvector.h:12, > from FetchReadsAmb.cc:22: >./feudal/FieldVec.h:752: warning: integer constant is too large for âlongâ type >In file included from ./feudal/FeudalString.h:29, > from ./feudal/CharString.h:19, > from ./String.h:13, > from ./system/System.h:16, > from ./CoreTools.h:17, > from ./feudal/FieldVec.h:20, > from feudal/BitVec.h:12, > from Bitvector.h:12, > from FetchReadsAmb.cc:22: >./feudal/SmallVec.h:443: warning: large integer implicitly truncated to unsigned type >In file included from ./feudal/MasterVec.h:24, > from ./VecString.h:14, > from ./CoreTools.h:22, > from ./feudal/FieldVec.h:20, > from feudal/BitVec.h:12, > from Bitvector.h:12, > from FetchReadsAmb.cc:22: >./feudal/OuterVec.h: In member function âsize_t OuterVec<T, A>::max_size() constâ: >./feudal/OuterVec.h:196: warning: left shift count >= width of type >In file included from feudal/BitVec.h:12, > from Bitvector.h:12, > from FetchReadsAmb.cc:22: >./feudal/FieldVec.h: At global scope: >./feudal/FieldVec.h:752: warning: large integer implicitly truncated to unsigned type >./feudal/FieldVec.h: In member function âFieldVec<N, A>& FieldVec<N, A>::push_back(unsigned char, float, unsigned int) [with int N = 2, A = MempoolAllocator<unsigned char>]â: >./feudal/FieldVec.h:494: instantiated from âFieldVec<N, A>& FieldVec<N, A>::push_back(unsigned char) [with int N = 2, A = MempoolAllocator<unsigned char>]â >feudal/BaseVec.h:184: instantiated from here >./feudal/FieldVec.h:506: error: no matching function for call to âmax(long unsigned int, const unsigned int&)â >In file included from ./feudal/FeudalString.h:29, > from ./feudal/CharString.h:19, > from ./String.h:13, > from ./system/System.h:16, > from ./CoreTools.h:17, > from ./feudal/FieldVec.h:20, > from feudal/BitVec.h:12, > from Bitvector.h:12, > from FetchReadsAmb.cc:22: >./feudal/SmallVec.h: In member function âSmallVec<T, A>& SmallVec<T, A>::push_back(const T&, float, unsigned int) [with T = char, A = MempoolAllocator<char>]â: >./feudal/SmallVec.h:215: instantiated from âSmallVec<T, A>& SmallVec<T, A>::push_back(const T&) [with T = char, A = MempoolAllocator<char>]â >./feudal/FeudalString.h:183: instantiated from âFeudalString<charT, Traits>& FeudalString<charT, Traits>::push_back(charT) [with charT = char, Traits = std::char_traits<char>]â >./feudal/CharString.h:148: instantiated from here >./feudal/SmallVec.h:226: error: no matching function for call to âmax(long unsigned int, const unsigned int&)â >distcc[9451] ERROR: compile FetchReadsAmb.cc on localhost failed >make[2]: *** [FetchReadsAmb.o] Error 1 >make[2]: Leaving directory `/var/tmp/portage/sci-biology/vaal-1.6/work/vaal-33805/src' >make[1]: *** [all] Error 2 >make[1]: Leaving directory `/var/tmp/portage/sci-biology/vaal-1.6/work/vaal-33805/src' >make: *** [all-recursive] Error 1 >emake failed > [31;01m*[0m ERROR: sci-biology/vaal-1.6 failed: > [31;01m*[0m died running emake, base_src_make > [31;01m*[0m > [31;01m*[0m Call stack: > [31;01m*[0m ebuild.sh, line 56: Called src_compile > [31;01m*[0m environment, line 2952: Called base_src_compile > [31;01m*[0m environment, line 418: Called base_src_make > [31;01m*[0m environment, line 456: Called die > [31;01m*[0m The specific snippet of code: > [31;01m*[0m emake "$@" || die "died running emake, $FUNCNAME"; > [31;01m*[0m > [31;01m*[0m If you need support, post the output of 'emerge --info =sci-biology/vaal-1.6', > [31;01m*[0m the complete build log and the output of 'emerge -pqv =sci-biology/vaal-1.6'. > [31;01m*[0m The complete build log is located at '/var/tmp/portage/sci-biology/vaal-1.6/temp/build.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-biology/vaal-1.6/temp/environment'. > [31;01m*[0m S: '/var/tmp/portage/sci-biology/vaal-1.6/work/vaal-33805'
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