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Gentoo's Bugzilla – Attachment 211082 Details for
Bug 294453
sci-chemistry/apbs fails to configure with autoconf-2.65
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Build log
apbs-1.2.0:20091124-164047.log (text/plain), 6.87 KB, created by
Diego Elio Pettenò (RETIRED)
on 2009-11-24 17:26:35 UTC
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Description:
Build log
Filename:
MIME Type:
Creator:
Diego Elio Pettenò (RETIRED)
Created:
2009-11-24 17:26:35 UTC
Size:
6.87 KB
patch
obsolete
> [32;01m*[0m You need one of these Fortran Compilers: g77 gfortran ifc > [32;01m*[0m Installed are: gfortran ifort >>>> Unpacking source... >>>> Unpacking apbs-1.2-source.tar.gz to /var/tmp/portage/sci-chemistry/apbs-1.2.0/work > [32;01m*[0m Applying patches for selected FORTRAN compiler: gfortran >>>> Source unpacked in /var/tmp/portage/sci-chemistry/apbs-1.2.0/work >>>> Preparing source in /var/tmp/portage/sci-chemistry/apbs-1.2.0/work/apbs-1.2-source ... > [32;01m*[0m Applying apbs-1.2.0-install-fix.patch ... >[A[155C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying apbs-1.2.0-contrib.patch ... >[A[155C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying apbs-1.2.0-link.patch ... >[A[155C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running eautoreconf in '/var/tmp/portage/sci-chemistry/apbs-1.2.0/work/apbs-1.2-source' ... > [32;01m*[0m Running aclocal ... >[A[155C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running libtoolize --copy --force --install --automake ... >[A[155C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running aclocal ... >[A[155C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running autoconf ... >[A[155C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running autoheader ... >[A[155C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running automake --add-missing --copy ... >[A[155C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Running elibtoolize in: apbs-1.2-source/config > [32;01m*[0m Applying portage-2.2.patch ... > [32;01m*[0m Applying sed-1.5.6.patch ... > [32;01m*[0m Applying as-needed-2.2.6.patch ... > [32;01m*[0m Applying uclibc-ltconf-1.3.0.patch ... > [32;01m*[0m Running elibtoolize in: apbs-1.2-source/contrib/maloc/tools/config > [32;01m*[0m Applying install-sh-1.5.patch ... > [32;01m*[0m Applying portage-1.5.10.patch ... > [32;01m*[0m Applying max_cmd_len-1.5.20.patch ... > [32;01m*[0m Applying sed-1.5.6.patch ... > [32;01m*[0m Applying as-needed-1.5.patch ... > [32;01m*[0m Applying uclibc-ltconf-1.3.0.patch ... > [32;01m*[0m Running elibtoolize in: apbs-1.2-source/contrib/maloc/config > [32;01m*[0m Applying install-sh-1.5.patch ... > [32;01m*[0m Applying portage-1.5.10.patch ... > [32;01m*[0m Applying max_cmd_len-1.5.20.patch ... > [32;01m*[0m Applying sed-1.5.6.patch ... > [32;01m*[0m Applying as-needed-1.5.patch ... > [32;01m*[0m Applying uclibc-ltconf-1.3.0.patch ... >>>> Source prepared. > [33;01m*[0m Flameeyes QA Warning! AC_CANONICAL_TARGET used >/var/tmp/portage/sci-chemistry/apbs-1.2.0/work/apbs-1.2-source/configure.ac:74:AC_CANONICAL_TARGET: > [33;01m*[0m Flameeyes QA Warning (end)! AC_CANONICAL_TARGET used >>>> Configuring source in /var/tmp/portage/sci-chemistry/apbs-1.2.0/work/apbs-1.2-source ... > * econf: updating apbs-1.2-source/config/config.sub with /usr/share/gnuconfig/config.sub > * econf: updating apbs-1.2-source/config/config.guess with /usr/share/gnuconfig/config.guess > * econf: updating apbs-1.2-source/contrib/maloc/tools/config/config.sub with /usr/share/gnuconfig/config.sub > * econf: updating apbs-1.2-source/contrib/maloc/tools/config/config.guess with /usr/share/gnuconfig/config.guess > * econf: updating apbs-1.2-source/contrib/maloc/config/config.sub with /usr/share/gnuconfig/config.sub > * econf: updating apbs-1.2-source/contrib/maloc/config/config.guess with /usr/share/gnuconfig/config.guess >./configure --prefix=/usr --build=i686-pc-linux-gnu --host=i686-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --enable-python --disable-maloc-rebuild --docdir=/usr/share/doc/apbs-1.2.0 >configure: loading site script /usr/share/config.site >configure: loading site script /usr/share/crossdev/include/site/linux >checking build system type... i686-pc-linux-gnu >checking host system type... i686-pc-linux-gnu >checking target system type... i686-pc-linux-gnu >checking for a BSD-compatible install... /usr/bin/install -c >checking whether build environment is sane... yes >checking for a thread-safe mkdir -p... /bin/mkdir -p >checking for gawk... gawk >checking whether make sets $(MAKE)... yes >checking for --enable-fast option... no >checking for --enable-python... yes >configure: Python linkage requires GNU compilers >checking for i686-pc-linux-gnu-gcc... i686-pc-linux-gnu-gcc >checking whether the C compiler works... yes >checking for C compiler default output file name... a.out >checking for suffix of executables... >checking whether we are cross compiling... no >checking for suffix of object files... o >checking whether we are using the GNU C compiler... yes >checking whether i686-pc-linux-gnu-gcc accepts -g... yes >checking for i686-pc-linux-gnu-gcc option to accept ISO C89... none needed >checking for style of include used by make... GNU >checking dependency style of i686-pc-linux-gnu-gcc... none >checking for i686-pc-linux-gnu-gcc... (cached) i686-pc-linux-gnu-gcc >checking whether we are using the GNU C compiler... (cached) yes >checking whether i686-pc-linux-gnu-gcc accepts -g... (cached) yes >checking for i686-pc-linux-gnu-gcc option to accept ISO C89... (cached) none needed >checking dependency style of i686-pc-linux-gnu-gcc... (cached) none >checking for i686-pc-linux-gnu-g++... i686-pc-linux-gnu-g++ >checking whether we are using the GNU C++ compiler... yes >checking whether i686-pc-linux-gnu-g++ accepts -g... yes >checking dependency style of i686-pc-linux-gnu-g++... none >checking for i686-pc-linux-gnu-gfortran... i686-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran 77 compiler... yes >checking whether i686-pc-linux-gnu-gfortran accepts -g... yes >checking if Fortran 77 compiler accepts -nofor_main... yes >checking if Fortran 77 compilers requires -nofor_main... no >./configure: line 5448: syntax error near unexpected token `fi' >./configure: line 5448: `fi' > >!!! Please attach the following file when seeking support: >!!! /var/tmp/portage/sci-chemistry/apbs-1.2.0/work/apbs-1.2-source/config.log > [31;01m*[0m ERROR: sci-chemistry/apbs-1.2.0 failed: > [31;01m*[0m econf failed > [31;01m*[0m > [31;01m*[0m Call stack: > [31;01m*[0m ebuild.sh, line 55: Called src_configure > [31;01m*[0m environment, line 4463: Called econf '--enable-python' '--disable-maloc-rebuild' '--docdir=/usr/share/doc/apbs-1.2.0' > [31;01m*[0m ebuild.sh, line 533: Called die > [31;01m*[0m The specific snippet of code: > [31;01m*[0m die "econf failed" > [31;01m*[0m > [31;01m*[0m If you need support, post the output of 'emerge --info =sci-chemistry/apbs-1.2.0', > [31;01m*[0m the complete build log and the output of 'emerge -pqv =sci-chemistry/apbs-1.2.0'. > [31;01m*[0m The complete build log is located at '/var/log/portage/build/sci-chemistry/apbs-1.2.0:20091124-164047.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-chemistry/apbs-1.2.0/temp/environment'. > [31;01m*[0m S: '/var/tmp/portage/sci-chemistry/apbs-1.2.0/work/apbs-1.2-source'
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