Output of configure --help for ncbi-tools++

0CONFIG.help (text/plain), 11.62 KB, created by Robert Bradbury on 2009-07-29 17:16:37 UTC

`configure' configures ncbi-tools++ 0.0 to adapt to many kinds of systems.

Usage: build-system/configure [OPTION]... [VAR=VALUE]...

To assign environment variables (e.g., CC, CFLAGS...), specify them as
VAR=VALUE.  See below for descriptions of some of the useful variables.

Defaults for the options are specified in brackets.

Configuration:
  -h, --help              display this help and exit
      --help=short        display options specific to this package
      --help=recursive    display the short help of all the included packages
  -V, --version           display version information and exit
  -q, --quiet, --silent   do not print `checking...' messages
      --cache-file=FILE   cache test results in FILE [disabled]
  -C, --config-cache      alias for `--cache-file=config.cache'
  -n, --no-create         do not create output files
      --srcdir=DIR        find the sources in DIR [configure dir or `..']

Installation directories:
  --prefix=PREFIX         install architecture-independent files in PREFIX
			  [/usr/local]
  --exec-prefix=EPREFIX   install architecture-dependent files in EPREFIX
			  [PREFIX]

By default, `make install' will install all the files in
`/usr/local/bin', `/usr/local/lib' etc.  You can specify
an installation prefix other than `/usr/local' using `--prefix',
for instance `--prefix=$HOME'.

For better control, use the options below.

Fine tuning of the installation directories:
  --bindir=DIR           user executables [EPREFIX/bin]
  --sbindir=DIR          system admin executables [EPREFIX/sbin]
  --libexecdir=DIR       program executables [EPREFIX/libexec]
  --datadir=DIR          read-only architecture-independent data [PREFIX/share]
  --sysconfdir=DIR       read-only single-machine data [PREFIX/etc]
  --sharedstatedir=DIR   modifiable architecture-independent data [PREFIX/com]
  --localstatedir=DIR    modifiable single-machine data [PREFIX/var]
  --libdir=DIR           object code libraries [EPREFIX/lib]
  --includedir=DIR       C header files [PREFIX/include]
  --oldincludedir=DIR    C header files for non-gcc [/usr/include]
  --infodir=DIR          info documentation [PREFIX/info]
  --mandir=DIR           man documentation [PREFIX/man]

X features:
  --x-includes=DIR    X include files are in DIR
  --x-libraries=DIR   X library files are in DIR

System types:
  --build=BUILD     configure for building on BUILD [guessed]
  --host=HOST       cross-compile to build programs to run on HOST [BUILD]

Optional Packages:
  --with-PACKAGE[=ARG]    use PACKAGE [ARG=yes]
  --without-PACKAGE       do not use PACKAGE (same as --with-PACKAGE=no)
===============================================================================
=============== NCBI C++ Toolkit specific configuration flags =================
 --without-debug         build non-debug versions of libs and apps
 --without-optimization  turn off optimization flags in non-debug mode
 --with-profiling        build profiled versions of libs and apps
 --with-dll              build all libraries as DLLs
 --with-static           build all libraries statically even if --with-dll
 --with-static-exe       build all executables as statically as possible
 --with-plugin-auto-load always enable the plugin manager by default
 --with-bin-release      build executables suitable for public release
 --with-mt               compile in a MultiThread-safe manner
 --with-64               compile to 64-bit code
 --with-universal        build universal binaries on Mac OS X
 --with-universal=CPUs   build universal binaries targeting the given CPUs
 --without-exe           do not build executables
 --with-runpath=         hard-code the runtime path to DLLs
 --with-lfs              enable large file support to the extent possible
 --with-extra-action=    script to call after the configuration is complete
 --with-autodep          automatic generation of dependencies (GNU make)
 --with-build-root=DIR   specify a non-default build directory name
 --with-fake-root=DIR    appear to have been built under DIR
 --without-suffix        no Release/Debug, MT or DLL sfx in the build dir name
 --with-hostspec         add full host specs to the build dir name
 --without-version       don't always include the cplr ver in the bd name
 --with-build-root-sfx=X add a user-specified suffix to the build dir name
 --without-execopy       do not copy built executables to the BIN area
 --with-bincopy          populate lib and bin with copies, not hard links
 --with-lib-rebuilds     ensure that apps use up-to-date libraries
 --with-lib-rebuilds=ask ask whether to update each app's libraries
 --without-deactivation  keep old copies of libraries that no longer build
 --without-makefile-auto-update  do not auto-update generated makefiles
 --with-projects=FILE    build projects listed in FILE by default
 --with-flat-makefile    generate a flat makefile to build all projects)
 --with-check            run test suite after the build
 --with-check-tools=...  use the specified tools for testing
 --with-ncbi-public      ensure compatibility for all in-house platforms
 --with-strip            strip binaries at build time
 --with-pch              use precompiled headers if possible
 --with-caution          cancel configuration unconditionally when in doubt
 --without-caution       proceed without asking when in doubt
 --without-ccache        do not automatically use ccache if available
 --with-distcc           use distcc if available
 --without-ncbi-c        do not use NCBI C Toolkit
 --without-sss           do not use NCBI SSS libraries
 --without-utils         do not use NCBI SSS UTIL library
 --without-sssdb         do not use NCBI SSS DB library
 --with-included-sss     use the in-tree copy of SSS
 --with-z=DIR            use zlib installation in DIR
 --without-z             use internal copy of zlib
 --with-bz2=DIR          use bzlib installation in DIR
 --without-bz2           use internal copy of bzlib
 --with-lzo=DIR          use LZO 1.x installation in DIR
 --without-lzo           do not use LZO 1.x
 --with-lzo2=DIR         use LZO 2.x installation in DIR
 --without-lzo2          do not use LZO 2.x
 --with-pcre=DIR         use PCRE installation in DIR
 --without-pcre          use internal copy of PCRE
 --with-gnutls=DIR       use GNUTLS installation in DIR
 --without-gnutls        do not use GNUTLS
 --with-openssl=DIR      use OpenSSL installation in DIR
 --without-openssl       do not use OpenSSL
 --without-sybase        do not use SYBASE libraries
 --with-sybase-local=DIR use local SYBASE install (DIR is optional)
 --with-sybase-new       use newer SYBASE install (12.5 rather than 12.0)
 --without-ftds          do not use FreeTDS libraries
 --with-ftds=DIR         use FreeTDS installation in DIR
 --without-ftds-renamed  do not rename Sybase DBLIB symbols in built-in FTDS
 --without-mysql         do not use MySQL
 --with-mysql=DIR        use MySQL installation in DIR
 --without-fltk          do not use FLTK
 --with-fltk=DIR         use FLTK installation in DIR
 --without-opengl        do not use OpenGL
 --with-opengl=DIR       use OpenGL installation in DIR
 --without-mesa          do not use MESA off-screen OpenGL
 --with-mesa=DIR         use MESA installation in DIR
 --without-glut          do not use GLUT
 --with-glut=DIR         use GLUT installation in DIR
 --without-wxwin         do not use wxWindows (2.4-)
 --with-wxwin=DIR        use wxWindows installation in DIR
 --without-wxwidgets     do not use wxWidgets (2.6+)
 --with-wxwidgets=DIR    use wxWidgets installation in DIR
 --without-freetype      do not use FreeType
 --with-freetype=DIR     use FreeType installation in DIR
 --without-fastcgi       do not use Fast-CGI library
 --with-fastcgi=VERSION  use Fast-CGI installation in \$NCBI/fcgi-VERSION
 --with-fastcgi=DIR      use Fast-CGI installation in DIR
 --without-bdb           do not use Berkeley DB library
 --with-bdb=VERSION      use DB installation in \$NCBI/BerkeleyDB-VERSION
 --with-bdb=DIR          use Berkeley DB installation in DIR
 --without-sp            do not use SP libraries
 --without-orbacus       do not use ORBacus CORBA libraries
 --with-orbacus=DIR      use ORBacus installation in DIR
 --with-odbc=DIR         use ODBC installation in DIR
 --with-python=DIR       use Python installation in DIR
 --without-python        do not use Python
 --with-cppunit=DIR      use CPPUNIT installation in DIR
 --without-cppunit       do not use CPPUNIT
 --with-boost=DIR        use Boost installation in DIR
 --without-boost=DIR     do not use Boost
 --with-boost-tag=TAG    use TAG as the tag appended to Boost library names
 --without-boost-tag     use untagged Boost library names
 --with-sqlite=DIR       use SQLite (2.x) installation in DIR
 --without-sqlite,       do not use SQLite 2.x
 --with-sqlite3=DIR      use SQLite 3.x installation in DIR
 --without-sqlite3,      do not use SQLite 3.x
 --with-icu=DIR          use ICU installation in DIR
 --without-icu,          do not use ICU
 --with-expat=DIR        use Expat installation in DIR
 --without-expat,        do not use Expat
 --with-sablot=DIR       use Sablotron installation in DIR
 --without-sablot,       do not use Sablotron
 --with-libxml=DIR       use libxml2 installation in DIR
 --without-libxml        do not use libxml2
 --with-libxslt=DIR      use libxslt installation in DIR
 --without-libxslt       do not use libxstl
 --with-xerces=DIR       use Xerces-C++ installation in DIR
 --without-xerces,       do not use Xerces-C++
 --with-xalan=DIR        use Xalan-C++ installation in DIR
 --without-xalan,        do not use Xalan-C++
 --with-oechem=DIR       use OpenEye OEChem installation in DIR
 --without-oechem        do not use OEChem
 --with-gif=DIR          use lib(un)gif installation in DIR
 --without-gif           do not use lib(un)gif
 --with-jpeg=DIR         use libjpeg installation in DIR
 --without-jpeg          do not use libjpeg
 --with-png=DIR          use libpng installation in DIR
 --without-png           do not use libpng
 --with-tiff=DIR         use libtiff installation in DIR
 --without-tiff          do not use libtiff
 --with-xpm=DIR          use libXpm installation in DIR
 --without-xpm           do not use libXpm
 --without-local-lbsm    turn off support for IPC with locally running LBSMD
 --without-ncbi-crypt    use a dummy stubbed-out version of ncbi_crypt
 --without-connext       do not build non-public CONNECT library extensions
 --without-serial        do not build the serialization library and tools
 --without-objects       do not generate/build serializeable objects from ASNs
 --without-dbapi         do not build database connectivity libraries
 --without-app           do not build standalone applications like ID1_FETCH
 --without-ctools        do not build NCBI C Toolkit based projects
 --without-gui           do not build FLTK-based projects
 --without-algo          do not build CPU-intensive algorithms
 --without-internal      do not build internal projects
 --with-gbench           ensure that Genome Workbench can be built
 --without-gbench        do not build Genome Workbench
***** See also HTML documentation in ./doc/index.html *****
  --with-x                use the X Window System

Some influential environment variables:
  CC          C compiler command
  CFLAGS      C compiler flags
  LDFLAGS     linker flags, e.g. -L<lib dir> if you have libraries in a
              nonstandard directory <lib dir>
  CPPFLAGS    C/C++ preprocessor flags, e.g. -I<include dir> if you have
              headers in a nonstandard directory <include dir>
  CXX         C++ compiler command
  CXXFLAGS    C++ compiler flags
  CXXCPP      C++ preprocessor
  CPP         C preprocessor

Use these variables to override the choices made by `configure' or to help
it to find libraries and programs with nonstandard names/locations.

Report bugs to <[e-mail]>.