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Gentoo's Bugzilla – Attachment 177014 Details for
Bug 253364
[new ebuild] sci-biology/phred-071220
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phred-071220.ebuild
phred-071220.ebuild (text/plain), 1.31 KB, created by
Martin Mokrejš
on 2009-01-01 16:10:10 UTC
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Description:
phred-071220.ebuild
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Creator:
Martin Mokrejš
Created:
2009-01-01 16:10:10 UTC
Size:
1.31 KB
patch
obsolete
># Copyright 1999-2008 Gentoo Foundation ># Distributed under the terms of the GNU General Public License v2 ># $Header: $ > >DESCRIPTION="Phred: reads DNA sequencer trace data, calls bases, assigns quality >values to the bases, and writes the base calls and quality values to output >files. Daev evaluates data set quality by reading the phd files in a directory >and writing a report to stdout." >HOMEPAGE="http://www.phrap.org/" >SRC_URI="phred-${PV}-distrib.tar.gz" > >LICENSE="phrap" >SLOT="0" >KEYWORDS="~x86 ~amd64" >IUSE="" > >DEPEND="" >RDEPEND="" > >S="${WORKDIR}" > >RESTRICT="fetch" > >pkg_nofetch() { > einfo "Please visit http://www.phrap.org/phredphrapconsed.html and obtain the file" > einfo '"distrib.tar.Z", then rename it to \"phred-${PV}-distrib.tar.gz\" and put it in' > einfo "${DISTDIR}" >} > >src_compile() { > einfo "Please test whether -DX86_GCC_LINUX works also on amd64 platforms, probably yes" > einfo "but how about other targets?" > > #FIXME: propagate $CFLAGS into the Makefile > sed -i 's/#LXFLAGS= -DX86_GCC_LINUX/LXFLAGS= -DX86_GCC_LINUX/' Makefile > make daev > emake || die "emake failed" >} > >src_install() { > newenvd "${FILESDIR}"/phred 21phred|| die "Failed to install env file." > > insinto /usr/share/phred > doins phredpar.dat > dobin phred daev > mv DAEV.DOC daev.txt > mv PHRED.DOC phred.txt > for i in {daev,phred}.txt ; do > dodoc ${i} > done >}
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bug 253364
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177106
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185120