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Gentoo's Bugzilla – Attachment 130029 Details for
Bug 191287
dev-lang/R-2.5.1 emerge failure
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build.log
build.log (text/plain), 125.58 KB, created by
Priit Laes (IRC: plaes)
on 2007-09-04 19:03:59 UTC
(
hide
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Description:
build.log
Filename:
MIME Type:
Creator:
Priit Laes (IRC: plaes)
Created:
2007-09-04 19:03:59 UTC
Size:
125.58 KB
patch
obsolete
> [32;01m*[0m 64 bit architecture detected, using g77 or gfortran. > [32;01m*[0m You need one of these Fortran Compilers: gfortran g77 ifc > [32;01m*[0m Installed are: gfortran >>>> Unpacking source... >>>> Unpacking R-2.5.1.tar.gz to /home/tmp/portage/dev-lang/R-2.5.1/work >>>> Source unpacked. >>>> Compiling source in /home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1 ... > * econf: updating R-2.5.1/tools/config.sub with /usr/share/gnuconfig/config.sub > * econf: updating R-2.5.1/tools/config.guess with /usr/share/gnuconfig/config.guess >./configure --prefix=/usr --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --enable-nls --without-blas --without-lapack --with-jpeglib --with-libpng --with-readline --with-x --enable-R-profiling --enable-R-shlib --enable-linux-lfs --without-tcltk --libdir=/usr/lib64 --build=x86_64-pc-linux-gnu >checking build system type... x86_64-pc-linux-gnu >checking host system type... x86_64-pc-linux-gnu >loading site script './config.site' >loading build specific script './config.site' >checking for pwd... /bin/pwd >checking whether builddir is srcdir... yes >checking for working aclocal... found >checking for working autoconf... found >checking for working automake... found >checking for working autoheader... found >checking for gawk... gawk >checking for grep that handles long lines and -e... /bin/grep >checking for egrep... /bin/grep -E >checking whether ln -s works... yes >checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib >checking for bison... bison -y >checking for ar... ar >checking for a BSD-compatible install... /usr/bin/install -c >checking for sed... /bin/sed >checking for /usr/bin/less... /usr/bin/less >checking for perl... /usr/bin/perl >checking whether perl version is at least 5.004... yes >checking for dvips... no >checking for tex... no >checking for latex... no >configure: WARNING: you cannot build DVI versions of the R manuals >checking for makeindex... no >checking for pdftex... no >checking for pdflatex... no >configure: WARNING: you cannot build PDF versions of the R manuals >checking for makeinfo... /usr/bin/makeinfo >checking whether makeinfo version is at least 4.7... yes >checking for unzip... /usr/bin/unzip >checking for zip... /usr/bin/zip >checking for gzip... /bin/gzip >checking for firefox... /usr/bin/firefox >using default browser ... /usr/bin/firefox >checking for acroread... no >checking for acroread4... no >checking for xpdf... no >checking for gv... no >checking for gnome-gv... no >checking for ggv... no >checking for kghostview... no >checking for open... no >checking for gpdf... no >configure: WARNING: I could not determine a PDF viewer >checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc >checking for C compiler default output file name... a.out >checking whether the C compiler works... yes >checking whether we are cross compiling... no >checking for suffix of executables... >checking for suffix of object files... o >checking whether we are using the GNU C compiler... yes >checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes >checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed >checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E >checking whether x86_64-pc-linux-gnu-gcc needs -traditional... no >checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E >checking for gfortran... gfortran >checking for x86_64-pc-linux-gnu-g77... (cached) gfortran >checking whether we are using the GNU Fortran 77 compiler... yes >checking whether gfortran accepts -g... yes >checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++ >checking whether we are using the GNU C++ compiler... yes >checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes >checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E >checking whether __attribute__((visibility())) is supported... yes >checking whether x86_64-pc-linux-gnu-gcc accepts -fvisibility... yes >checking whether gfortran accepts -fvisibility... yes >checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc >checking whether we are using the GNU Objective C compiler... no >checking whether x86_64-pc-linux-gnu-gcc accepts -g... no >checking whether x86_64-pc-linux-gnu-g++ can compile ObjC++... no >checking for Objective C++ compiler... no working compiler found >checking for a sed that does not truncate output... /bin/sed >checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld >checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes >checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r >checking for BSD-compatible nm... /usr/bin/x86_64-pc-linux-gnu-nm -B >checking how to recognise dependent libraries... pass_all >checking for ANSI C header files... yes >checking for sys/types.h... yes >checking for sys/stat.h... yes >checking for stdlib.h... yes >checking for string.h... yes >checking for memory.h... yes >checking for strings.h... yes >checking for inttypes.h... yes >checking for stdint.h... yes >checking for unistd.h... yes >checking dlfcn.h usability... yes >checking dlfcn.h presence... yes >checking for dlfcn.h... yes >checking the maximum length of command line arguments... 32768 >checking command to parse /usr/bin/x86_64-pc-linux-gnu-nm -B output from x86_64-pc-linux-gnu-gcc object... ok >checking for objdir... .libs >checking for x86_64-pc-linux-gnu-ar... (cached) ar >checking for x86_64-pc-linux-gnu-ranlib... (cached) x86_64-pc-linux-gnu-ranlib >checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip >checking if x86_64-pc-linux-gnu-gcc static flag works... yes >checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no >checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC >checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC works... yes >checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes >checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking whether -lc should be explicitly linked in... no >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking whether stripping libraries is possible... yes >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >configure: creating libtool >appending configuration tag "CXX" to libtool >checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 >checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes >checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC >checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC works... no >checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... no >checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking whether stripping libraries is possible... yes >appending configuration tag "F77" to libtool >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >checking for gfortran option to produce PIC... -fPIC >checking if gfortran PIC flag -fPIC works... yes >checking if gfortran supports -c -o file.o... yes >checking whether the gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking whether stripping libraries is possible... yes >checking for cos in -lm... yes >checking for sin in -lm... yes >checking for dlopen in -ldl... yes >checking readline/history.h usability... yes >checking readline/history.h presence... yes >checking for readline/history.h... yes >checking readline/readline.h usability... yes >checking readline/readline.h presence... yes >checking for readline/readline.h... yes >checking for rl_callback_read_char in -lreadline... yes >checking for history_truncate_file... yes >checking whether rl_completion_matches exists and is declared... yes >checking for ANSI C header files... (cached) yes >checking whether time.h and sys/time.h may both be included... yes >checking for dirent.h that defines DIR... yes >checking for library containing opendir... none required >checking for sys/wait.h that is POSIX.1 compatible... yes >checking arpa/inet.h usability... yes >checking arpa/inet.h presence... yes >checking for arpa/inet.h... yes >checking dl.h usability... no >checking dl.h presence... no >checking for dl.h... no >checking for dlfcn.h... (cached) yes >checking elf.h usability... yes >checking elf.h presence... yes >checking for elf.h... yes >checking fcntl.h usability... yes >checking fcntl.h presence... yes >checking for fcntl.h... yes >checking floatingpoint.h usability... no >checking floatingpoint.h presence... no >checking for floatingpoint.h... no >checking fpu_control.h usability... yes >checking fpu_control.h presence... yes >checking for fpu_control.h... yes >checking glob.h usability... yes >checking glob.h presence... yes >checking for glob.h... yes >checking grp.h usability... yes >checking grp.h presence... yes >checking for grp.h... yes >checking ieee754.h usability... yes >checking ieee754.h presence... yes >checking for ieee754.h... yes >checking ieeefp.h usability... no >checking ieeefp.h presence... no >checking for ieeefp.h... no >checking limits.h usability... yes >checking limits.h presence... yes >checking for limits.h... yes >checking locale.h usability... yes >checking locale.h presence... yes >checking for locale.h... yes >checking netdb.h usability... yes >checking netdb.h presence... yes >checking for netdb.h... yes >checking netinet/in.h usability... yes >checking netinet/in.h presence... yes >checking for netinet/in.h... yes >checking pwd.h usability... yes >checking pwd.h presence... yes >checking for pwd.h... yes >checking stdbool.h usability... yes >checking stdbool.h presence... yes >checking for stdbool.h... yes >checking for strings.h... (cached) yes >checking sys/param.h usability... yes >checking sys/param.h presence... yes >checking for sys/param.h... yes >checking sys/select.h usability... yes >checking sys/select.h presence... yes >checking for sys/select.h... yes >checking sys/socket.h usability... yes >checking sys/socket.h presence... yes >checking for sys/socket.h... yes >checking for sys/stat.h... (cached) yes >checking sys/resource.h usability... yes >checking sys/resource.h presence... yes >checking for sys/resource.h... yes >checking sys/time.h usability... yes >checking sys/time.h presence... yes >checking for sys/time.h... yes >checking sys/times.h usability... yes >checking sys/times.h presence... yes >checking for sys/times.h... yes >checking sys/utsname.h usability... yes >checking sys/utsname.h presence... yes >checking for sys/utsname.h... yes >checking time.h usability... yes >checking time.h presence... yes >checking for time.h... yes >checking for unistd.h... (cached) yes >checking errno.h usability... yes >checking errno.h presence... yes >checking for errno.h... yes >checking for inttypes.h... (cached) yes >checking stdarg.h usability... yes >checking stdarg.h presence... yes >checking for stdarg.h... yes >checking for stdint.h... (cached) yes >checking for string.h... (cached) yes >checking whether setjmp.h is POSIX.1 compatible... yes >checking whether sigsetjmp is declared... yes >checking whether siglongjmp is declared... yes >checking for GNU C library with version >= 2... yes >checking return type of signal handlers... void >checking for pid_t... yes >checking for size_t... yes >checking whether SIZE_MAX is declared... yes >checking for blkcnt_t... yes >checking for type of socket length... socklen_t * >checking for stack_t... yes >checking for intptr_t... yes >checking for uintptr_t... yes >checking whether byte ordering is bigendian... no >checking for an ANSI C-conforming const... yes >checking for x86_64-pc-linux-gnu-gcc option to accept ISO C99... none needed >checking for x86_64-pc-linux-gnu-gcc option to accept ISO Standard C... (cached) none needed >checking for inline... inline >checking for int... yes >checking size of int... 4 >checking for long... yes >checking size of long... 8 >checking for long long... yes >checking size of long long... 8 >checking for double... yes >checking size of double... 8 >checking for long double... yes >checking size of long double... 16 >checking whether we can compute C Make dependencies... yes, using x86_64-pc-linux-gnu-gcc -MM >checking whether x86_64-pc-linux-gnu-gcc supports -c -o FILE.lo... yes >checking how to get verbose linking output from gfortran... -v >checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.2.0 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.2.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.2.0/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.2.0/../../.. -lgfortranbegin -lgfortran -lm -lgcc_s >checking how to get verbose linking output from x86_64-pc-linux-gnu-gcc... -v >checking for C libraries of x86_64-pc-linux-gnu-gcc... -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.2.0 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.2.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.2.0/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.2.0/../../.. -lgcc_s >checking for dummy main to link with Fortran 77 libraries... none >checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore >checking whether gfortran appends underscores to external names... yes >checking whether gfortran appends extra underscores to external names... no >checking whether mixed C/Fortran code can be run... yes >checking whether gfortran and x86_64-pc-linux-gnu-gcc agree on int and double... yes >checking whether gfortran and x86_64-pc-linux-gnu-gcc agree on double complex... yes >checking whether x86_64-pc-linux-gnu-g++ accepts -M for generating dependencies... yes >checking for ObjC runtime library... none >checking whether default Foundation framework works... no >checking whether -framework Foundation works... no >checking whether libFoundation works... no >checking for GNUstep... no >checking for working Foundation implementation... no >checking whether C runtime needs -D__NO_MATH_INLINES... no >checking for xmkmf... no >checking for off_t... yes >checking for working alloca.h... yes >checking for alloca... yes >checking whether alloca is declared... yes >checking for fseeko... yes >checking for ftello... yes >checking for isblank... yes >checking for matherr... yes >checking whether fcntl exists and is declared... yes >checking whether getgrgid exists and is declared... yes >checking whether expm1 exists and is declared... yes >checking whether hypot exists and is declared... yes >checking whether log1p exists and is declared... yes >checking whether log2 exists and is declared... yes >checking whether log10 exists and is declared... yes >checking whether rint exists and is declared... yes >checking whether getpwuid exists and is declared... yes >checking whether sigaction exists and is declared... yes >checking whether sigaltstack exists and is declared... yes >checking whether sigemptyset exists and is declared... yes >checking whether va_copy exists and is declared... yes >checking whether __va_copy exists and is declared... yes >checking whether fdopen exists and is declared... yes >checking whether popen exists and is declared... yes >checking whether setenv exists and is declared... yes >checking whether system exists and is declared... yes >checking whether unsetenv exists and is declared... yes >checking whether strcoll exists and is declared... yes >checking whether strerror exists and is declared... yes >checking whether getrlimit exists and is declared... yes >checking whether getrusage exists and is declared... yes >checking whether mkfifo exists and is declared... yes >checking whether stat exists and is declared... yes >checking whether gettimeofday exists and is declared... yes >checking whether times exists and is declared... yes >checking whether time exists and is declared... yes >checking whether access exists and is declared... yes >checking whether chdir exists and is declared... yes >checking whether execv exists and is declared... yes >checking whether ftruncate exists and is declared... yes >checking whether getcwd exists and is declared... yes >checking whether getuid exists and is declared... yes >checking whether symlink exists and is declared... yes >checking whether sysconf exists and is declared... yes >checking for putenv... yes >checking whether putenv is declared... yes >checking for vasprintf... yes >checking whether vasprintf is declared... no >checking for realpath... yes >checking whether realpath is declared... yes >checking whether glob exists and is declared... yes >checking for finite... yes >checking for isnan... yes >checking whether isfinite is declared... yes >checking whether isnan is declared... yes >checking whether you have IEEE 754 floating-point arithmetic... yes >checking whether putenv("FOO") can unset an environment variable... yes >checking whether putenv("FOO=") can unset an environment variable... no >checking for nl_langinfo and CODESET... yes >checking for acosh... yes >checking for asinh... yes >checking for atanh... yes >checking for mkdtemp... yes >checking for snprintf... yes >checking for strdup... yes >checking for strncasecmp... yes >checking for vsnprintf... yes >checking whether acosh is declared... yes >checking whether asinh is declared... yes >checking whether atanh is declared... yes >checking whether mkdtemp is declared... yes >checking whether snprintf is declared... yes >checking whether strdup is declared... yes >checking whether strncasecmp is declared... yes >checking whether vsnprintf is declared... yes >checking for library containing connect... none required >checking for library containing gethostbyname... none required >checking for library containing xdr_string... none required >checking for __setfpucw... no >checking for working calloc... yes >checking for working finite... yes >checking for working isfinite... yes >checking for working log... yes >checking for working log1p... yes >checking whether ftell works correctly on files opened for append... yes >checking for working sigaction... yes >checking whether C99 double complex is supported... >checking complex.h usability... yes >checking complex.h presence... yes >checking for complex.h... yes >checking for double complex... yes >checking whether cexp exists and is declared... yes >checking whether clog exists and is declared... yes >checking whether csqrt exists and is declared... yes >checking whether cpow exists and is declared... yes >checking whether ccos exists and is declared... yes >checking whether csin exists and is declared... yes >checking whether ctan exists and is declared... yes >checking whether cacos exists and is declared... yes >checking whether casin exists and is declared... yes >checking whether catan exists and is declared... yes >checking whether ccosh exists and is declared... yes >checking whether csinh exists and is declared... yes >checking whether ctanh exists and is declared... yes >checking whether cacosh exists and is declared... yes >checking whether casinh exists and is declared... yes >checking whether catanh exists and is declared... yes >checking whether C99 double complex is compatible with Rcomplex... yes >yes >checking for cblas_cdotu_sub in vecLib framework... no >checking iconv.h usability... yes >checking iconv.h presence... yes >checking for iconv.h... yes >checking for iconv... yes >checking whether iconv accepts "UTF-8", "latin1" and "UCS-*"... yes >checking for iconvlist... no >checking wchar.h usability... yes >checking wchar.h presence... yes >checking for wchar.h... yes >checking wctype.h usability... yes >checking wctype.h presence... yes >checking for wctype.h... yes >checking whether mbrtowc exists and is declared... yes >checking whether wcrtomb exists and is declared... yes >checking whether wcscoll exists and is declared... yes >checking whether wcsftime exists and is declared... yes >checking whether mbstowcs exists and is declared... yes >checking whether wcstombs exists and is declared... yes >checking whether wctrans exists and is declared... yes >checking whether iswblank exists and is declared... yes >checking whether wctype exists and is declared... yes >checking whether iswctype exists and is declared... yes >checking for wctrans_t... yes >checking for mbstate_t... yes >checking for X... libraries /usr/lib, headers >checking for gethostbyname... yes >checking for connect... yes >checking for remove... yes >checking for shmat... yes >checking for IceConnectionNumber in -lICE... yes >checking X11/Intrinsic.h usability... yes >checking X11/Intrinsic.h presence... yes >checking for X11/Intrinsic.h... yes >checking for XtToolkitInitialize in -lXt... yes >using X11 ... yes >checking for KeySym... yes >checking X11/Xmu/Atoms.h usability... yes >checking X11/Xmu/Atoms.h presence... yes >checking for X11/Xmu/Atoms.h... yes >checking for XmuInternAtom in -lXmu... yes >checking for CFStringGetSystemEncoding in CoreFoundation framework... no >checking for BSD networking... yes >checking if jpeglib version >= 6b... yes >checking for jpeg_destroy_compress in -ljpeg... yes >checking for main in -lz... yes >checking if libpng version >= 1.0.5... yes >checking for png_create_write_struct in -lpng... yes >checking rpc/types.h usability... yes >checking rpc/types.h presence... yes >checking for rpc/types.h... yes >checking for rpc/xdr.h... yes >checking for XDR support... yes >checking whether zlib support needs to be compiled... yes >checking mmap support for zlib... yes >checking whether bzip2 support needs to be compiled... yes >checking whether PCRE support needs to be compiled... yes >checking whether leap seconds are treated according to POSIX... yes >checking for setitimer... yes >checking for special C compiler options needed for large files... no >checking for _FILE_OFFSET_BITS value needed for large files... no >checking for _LARGE_FILES value needed for large files... no >checking for _LARGEFILE_SOURCE value needed for large files... no >checking for fseeko... (cached) yes >checking whether KERN_USRSTACK sysctl is supported... no >checking for visible __lib_stack_end... yes >checking for lpr... lpr >checking for paperconf... /usr/bin/paperconf >checking for java... /opt/blackdown-jdk-1.4.2.03/jre/bin/java >checking for javac... /opt/blackdown-jdk-1.4.2.03/bin/javac >checking for javah... /opt/blackdown-jdk-1.4.2.03/bin/javah >checking for jar... /opt/blackdown-jdk-1.4.2.03/bin/jar >checking whether Java compiler works... yes >checking whether Java interpreter works... yes >checking for Java environment... in /opt/blackdown-jdk-1.4.2.03 >checking whether JNI programs can be compiled... yes >checking for x86_64-pc-linux-gnu-gfortran... x86_64-pc-linux-gnu-gfortran >checking whether we are using the GNU Fortran compiler... yes >checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes >checking for Fortran flag to compile .f90 files... none >checking for Fortran flag to compile .f95 files... none >checking for recommended packages... yes >checking whether NLS is requested... yes >checking whether make sets $(MAKE)... yes >checking for msgfmt... /usr/bin/msgfmt >checking for gmsgfmt... /usr/bin/gmsgfmt >checking for xgettext... /usr/bin/xgettext >checking for msgmerge... /usr/bin/msgmerge >checking whether we are using the GNU C Library 2 or newer... yes >checking for library containing strerror... none required >checking for signed... yes >checking for inline... inline >checking for off_t... (cached) yes >checking for long long... (cached) yes >checking for long double... yes >checking for wchar_t... yes >checking for wint_t... yes >checking for inttypes.h... yes >checking for stdint.h... yes >checking for intmax_t... yes >checking whether printf() supports POSIX/XSI format strings... yes >checking for stdlib.h... (cached) yes >checking for unistd.h... (cached) yes >checking for getpagesize... yes >checking for working mmap... yes >checking whether we are using the GNU C Library 2.1 or newer... yes >checking whether integer division by zero raises SIGFPE... yes >checking for unsigned long long... yes >checking for inttypes.h... yes >checking whether the inttypes.h PRIxNN macros are broken... no >checking for stdint.h... (cached) yes >checking for SIZE_MAX... yes >checking for stdint.h... (cached) yes >checking for CFPreferencesCopyAppValue... no >checking for CFLocaleCopyCurrent... no >checking for ld used by GCC... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 >checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes >checking for shared library run path origin... done >checking for ptrdiff_t... yes >checking argz.h usability... yes >checking argz.h presence... yes >checking for argz.h... yes >checking for limits.h... (cached) yes >checking for locale.h... (cached) yes >checking nl_types.h usability... yes >checking nl_types.h presence... yes >checking for nl_types.h... yes >checking malloc.h usability... yes >checking malloc.h presence... yes >checking for malloc.h... yes >checking stddef.h usability... yes >checking stddef.h presence... yes >checking for stddef.h... yes >checking for stdlib.h... (cached) yes >checking for string.h... (cached) yes >checking for unistd.h... (cached) yes >checking for sys/param.h... (cached) yes >checking for asprintf... yes >checking for fwprintf... yes >checking for getcwd... yes >checking for getegid... yes >checking for geteuid... yes >checking for getgid... yes >checking for getuid... yes >checking for mempcpy... yes >checking for munmap... yes >checking for putenv... (cached) yes >checking for setenv... yes >checking for setlocale... yes >checking for snprintf... (cached) yes >checking for stpcpy... yes >checking for strcasecmp... yes >checking for strdup... (cached) yes >checking for strtoul... yes >checking for tsearch... yes >checking for wcslen... yes >checking for __argz_count... yes >checking for __argz_stringify... yes >checking for __argz_next... yes >checking for __fsetlocking... yes >checking whether _snprintf is declared... no >checking whether _snwprintf is declared... no >checking whether feof_unlocked is declared... yes >checking whether fgets_unlocked is declared... no >checking whether getc_unlocked is declared... yes >checking for iconv... yes >checking for iconv declaration... > extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); >checking for nl_langinfo and CODESET... (cached) yes >checking for LC_MESSAGES... yes >checking for bison... bison >checking version of bison... 2.3, ok >checking for CFPreferencesCopyAppValue... (cached) no >checking for CFLocaleCopyCurrent... 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>config.status: creating src/scripts/Sd2Rd >config.status: creating src/scripts/build >config.status: creating src/scripts/check >config.status: creating src/unix/Makefile >config.status: creating tests/Makefile >config.status: creating tests/Embedding/Makefile >config.status: creating tests/Examples/Makefile >config.status: creating tests/Native/Makefile >config.status: creating tools/Makefile >config.status: creating src/include/config.h >config.status: executing default-1 commands >config.status: creating po/POTFILES >config.status: creating po/Makefile >config.status: executing stamp-h commands > >R is now configured for x86_64-pc-linux-gnu > > Source directory: . > Installation directory: /usr > > C compiler: x86_64-pc-linux-gnu-gcc -march=nocona -ggdb -O2 -pipe -std=gnu99 > Fortran 77 compiler: gfortran -g -O2 > > C++ compiler: x86_64-pc-linux-gnu-g++ -march=nocona -ggdb -O2 -pipe -std=gnu99 > Fortran 90/95 compiler: x86_64-pc-linux-gnu-gfortran -g -O2 > Obj-C compiler: x86_64-pc-linux-gnu-gcc > > Interfaces supported: X11 > External libraries: readline > Additional capabilities: PNG, JPEG, iconv, MBCS, NLS > Options enabled: shared R library, shared BLAS, R profiling, Java > > Recommended packages: yes > >configure: WARNING: you cannot build DVI versions of the R manuals >configure: WARNING: you cannot build PDF versions of the R manuals >configure: WARNING: I could not determine a PDF viewer >make[1]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/m4' >make[1]: Nothing to be done for `R'. >make[1]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/m4' >make[1]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/tools' >make[1]: Nothing to be done for `R'. >make[1]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/tools' >make[1]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/doc' >make[2]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/doc/html' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/doc/html/search' >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/doc/html/search' >make[2]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/doc/html' >make[2]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/doc/manual' >make[2]: Nothing to be done for `R'. >make[2]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/doc/manual' >make[1]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/doc' >make[1]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/etc' >make[1]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/etc' >make[1]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/share' >make[1]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/share' >make[1]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src' >make[2]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/scripts' >creating src/scripts/R.fe >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/scripts' >mkdir -p -- ../../bin >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/scripts' >make[2]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/scripts' >make[2]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/include' >mkdir -p -- ../../include >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/include/R_ext' >mkdir -p -- ../../../include/R_ext >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/include/R_ext' >make[2]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/include' >make[2]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/blas' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/blas' >gfortran -fpic -g -O2 -c blas.f -o blas.o >gfortran -fpic -g -O2 -c cmplxblas.f -o cmplxblas.o >x86_64-pc-linux-gnu-gcc -shared -Wl,--as-needed -o libRblas.so blas.o cmplxblas.o >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/blas' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/blas' >mkdir -p -- /home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/lib >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/blas' >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/blas' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/bzip2' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/bzip2' >making blocksort.d from blocksort.c >making bzlib.d from bzlib.c >making compress.d from compress.c >making crctable.d from crctable.c >making decompress.d from decompress.c >making huffman.d from huffman.c >making randtable.d from randtable.c >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/bzip2' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/bzip2' >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c blocksort.c -o blocksort.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c bzlib.c -o bzlib.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c compress.c -o compress.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c crctable.c -o crctable.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c decompress.c -o decompress.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c huffman.c -o huffman.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c randtable.c -o randtable.o >rm -f libbz2.a >ar cr libbz2.a blocksort.o bzlib.o compress.o crctable.o decompress.o huffman.o randtable.o >x86_64-pc-linux-gnu-ranlib libbz2.a >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/bzip2' >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/bzip2' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/pcre' >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c dftables.c -o dftables.o >x86_64-pc-linux-gnu-gcc -Wl,--as-needed -o dftables dftables.o >./dftables chartables.h >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/pcre' >making pcre_compile.d from pcre_compile.c >making pcre_config.d from pcre_config.c >making pcre_exec.d from pcre_exec.c >making pcre_fullinfo.d from pcre_fullinfo.c >making pcre_get.d from pcre_get.c >making pcre_globals.d from pcre_globals.c >making pcre_info.d from pcre_info.c >making pcre_maketables.d from pcre_maketables.c >making pcre_newline.d from pcre_newline.c >making pcre_ord2utf8.d from pcre_ord2utf8.c >making pcre_refcount.d from pcre_refcount.c >making pcre_study.d from pcre_study.c >making pcre_tables.d from pcre_tables.c >making pcre_try_flipped.d from pcre_try_flipped.c >making pcre_valid_utf8.d from pcre_valid_utf8.c >making pcre_version.d from pcre_version.c >making pcre_xclass.d from pcre_xclass.c >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/pcre' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/pcre' >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_compile.c -o pcre_compile.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_config.c -o pcre_config.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_exec.c -o pcre_exec.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_fullinfo.c -o pcre_fullinfo.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_get.c -o pcre_get.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_globals.c -o pcre_globals.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_info.c -o pcre_info.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_maketables.c -o pcre_maketables.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_newline.c -o pcre_newline.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_ord2utf8.c -o pcre_ord2utf8.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_refcount.c -o pcre_refcount.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_study.c -o pcre_study.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_tables.c -o pcre_tables.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_try_flipped.c -o pcre_try_flipped.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_valid_utf8.c -o pcre_valid_utf8.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_version.c -o pcre_version.o >x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c pcre_xclass.c -o pcre_xclass.o >rm -f libpcre.a >ar cr libpcre.a pcre_compile.o pcre_config.o pcre_exec.o pcre_fullinfo.o pcre_get.o pcre_globals.o pcre_info.o pcre_maketables.o pcre_newline.o pcre_ord2utf8.o pcre_refcount.o pcre_study.o pcre_tables.o pcre_try_flipped.o pcre_valid_utf8.o pcre_version.o pcre_xclass.o >x86_64-pc-linux-gnu-ranlib libpcre.a >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/pcre' >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/pcre' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/zlib' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/zlib' >making adler32.d from adler32.c >making compress.d from compress.c >making crc32.d from crc32.c >making deflate.d from deflate.c >making gzio.d from gzio.c >making infback.d from infback.c >making inffast.d from inffast.c >making inflate.d from inflate.c >making inftrees.d from inftrees.c >making trees.d from trees.c >making uncompr.d from uncompr.c >making zutil.d from zutil.c >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/zlib' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/zlib' >x86_64-pc-linux-gnu-gcc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c adler32.c -o adler32.o >x86_64-pc-linux-gnu-gcc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c compress.c -o compress.o >x86_64-pc-linux-gnu-gcc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c crc32.c -o crc32.o >x86_64-pc-linux-gnu-gcc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c deflate.c -o deflate.o >x86_64-pc-linux-gnu-gcc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c gzio.c -o gzio.o >x86_64-pc-linux-gnu-gcc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c infback.c -o infback.o >x86_64-pc-linux-gnu-gcc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c inffast.c -o inffast.o >x86_64-pc-linux-gnu-gcc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c inflate.c -o inflate.o >x86_64-pc-linux-gnu-gcc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c inftrees.c -o inftrees.o >x86_64-pc-linux-gnu-gcc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c trees.c -o trees.o >x86_64-pc-linux-gnu-gcc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c uncompr.c -o uncompr.o >x86_64-pc-linux-gnu-gcc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c zutil.c -o zutil.o >rm -f libz.a >ar cr libz.a adler32.o compress.o crc32.o deflate.o gzio.o infback.o inffast.o inflate.o inftrees.o trees.o uncompr.o zutil.o >x86_64-pc-linux-gnu-ranlib libz.a >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/zlib' >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra/zlib' >make[2]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/extra' >make[2]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/appl' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/appl' >making approx.d from approx.c >making bakslv.d from bakslv.c >making binning.d from binning.c >making cpoly.d from cpoly.c >making cumsum.d from cumsum.c >making fft.d from fft.c >making fmin.d from fmin.c >making integrate.d from integrate.c >making interv.d from interv.c >making lbfgsb.d from lbfgsb.c >making loglin.d from loglin.c >making lowess.d from lowess.c >making machar.d from machar.c >making maxcol.d from maxcol.c >making massdist.d from massdist.c >making pretty.d from pretty.c >making rcont.d from rcont.c >making rowsum.d from rowsum.c >making splines.d from splines.c >making stem.d from stem.c >making strsignif.d from strsignif.c >making tabulate.d from tabulate.c >making uncmin.d from uncmin.c >making zeroin.d from zeroin.c >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/appl' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/appl' >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c approx.c -o approx.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c bakslv.c -o bakslv.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c binning.c -o binning.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c cpoly.c -o cpoly.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c cumsum.c -o cumsum.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c fft.c -o fft.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c fmin.c -o fmin.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c integrate.c -o integrate.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c interv.c -o interv.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c lbfgsb.c -o lbfgsb.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c loglin.c -o loglin.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c lowess.c -o lowess.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c machar.c -o machar.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c maxcol.c -o maxcol.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c massdist.c -o massdist.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pretty.c -o pretty.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rcont.c -o rcont.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rowsum.c -o rowsum.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c splines.c -o splines.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c stem.c -o stem.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c strsignif.c -o strsignif.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c tabulate.c -o tabulate.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c uncmin.c -o uncmin.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c zeroin.c -o zeroin.o >gfortran -fpic -g -O2 -c ch2inv.f -o ch2inv.o >gfortran -fpic -g -O2 -c chol.f -o chol.o >gfortran -fpic -g -O2 -c dchdc.f -o dchdc.o >gfortran -fpic -g -O2 -c dpbfa.f -o dpbfa.o >gfortran -fpic -g -O2 -c dpbsl.f -o dpbsl.o >gfortran -fpic -g -O2 -c dpoco.f -o dpoco.o >gfortran -fpic -g -O2 -c dpodi.f -o dpodi.o >gfortran -fpic -g -O2 -c dpofa.f -o dpofa.o >gfortran -fpic -g -O2 -c dposl.f -o dposl.o >gfortran -fpic -g -O2 -c dqrdc.f -o dqrdc.o >gfortran -fpic -g -O2 -c dqrdc2.f -o dqrdc2.o >gfortran -fpic -g -O2 -c dqrls.f -o dqrls.o >gfortran -fpic -g -O2 -c dqrsl.f -o dqrsl.o >gfortran -fpic -g -O2 -c dqrutl.f -o dqrutl.o >gfortran -fpic -g -O2 -c dsvdc.f -o dsvdc.o >gfortran -fpic -g -O2 -c dtrco.f -o dtrco.o >gfortran -fpic -g -O2 -c dtrsl.f -o dtrsl.o >gfortran -fpic -g -O2 -c eigen.f -o eigen.o >gfortran -fpic -g -O2 -c lminfl.f -o lminfl.o >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/appl' >make[2]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/appl' >make[2]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/nmath' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/nmath' >making mlutils.d from mlutils.c >making d1mach.d from d1mach.c >making i1mach.d from i1mach.c >making fmax2.d from fmax2.c >making fmin2.d from fmin2.c >making fprec.d from fprec.c >making fround.d from fround.c >making ftrunc.d from ftrunc.c >making sign.d from sign.c >making fsign.d from fsign.c >making imax2.d from imax2.c >making imin2.d from imin2.c >making chebyshev.d from chebyshev.c >making log1p.d from log1p.c >making expm1.d from expm1.c >making lgammacor.d from lgammacor.c >making gammalims.d from gammalims.c >making stirlerr.d from stirlerr.c >making bd0.d from bd0.c >making gamma.d from gamma.c >making lgamma.d from lgamma.c >making gamma_cody.d from gamma_cody.c >making beta.d from beta.c >making lbeta.d from lbeta.c >making polygamma.d from polygamma.c >making bessel_i.d from bessel_i.c >making bessel_j.d from bessel_j.c >making bessel_k.d from bessel_k.c >making bessel_y.d from bessel_y.c >making choose.d from choose.c >making snorm.d from snorm.c >making sexp.d from sexp.c >making dgamma.d from dgamma.c >making pgamma.d from pgamma.c >making qgamma.d from qgamma.c >making rgamma.d from rgamma.c >making dbeta.d from dbeta.c >making pbeta.d from pbeta.c >making qbeta.d from qbeta.c >making rbeta.d from rbeta.c >making dunif.d from dunif.c >making punif.d from punif.c >making qunif.d from qunif.c >making runif.d from runif.c >making dnorm.d from dnorm.c >making pnorm.d from pnorm.c >making qnorm.d from qnorm.c >making rnorm.d from rnorm.c >making dlnorm.d from dlnorm.c >making plnorm.d from plnorm.c >making qlnorm.d from qlnorm.c >making rlnorm.d from rlnorm.c >making df.d from df.c >making pf.d from pf.c >making qf.d from qf.c >making rf.d from rf.c >making dnf.d from dnf.c >making dt.d from dt.c >making pt.d from pt.c >making qt.d from qt.c >making rt.d from rt.c >making dnt.d from dnt.c >making dchisq.d from dchisq.c >making pchisq.d from pchisq.c >making qchisq.d from qchisq.c >making rchisq.d from rchisq.c >making rnchisq.d from rnchisq.c >making dbinom.d from dbinom.c >making pbinom.d from pbinom.c >making qbinom.d from qbinom.c >making rbinom.d from rbinom.c >making rmultinom.d from rmultinom.c >making dcauchy.d from dcauchy.c >making pcauchy.d from pcauchy.c >making qcauchy.d from qcauchy.c >making rcauchy.d from rcauchy.c >making dexp.d from dexp.c >making pexp.d from pexp.c >making qexp.d from qexp.c >making rexp.d from rexp.c >making dgeom.d from dgeom.c >making pgeom.d from pgeom.c >making qgeom.d from qgeom.c >making rgeom.d from rgeom.c >making dhyper.d from dhyper.c >making phyper.d from phyper.c >making qhyper.d from qhyper.c >making rhyper.d from rhyper.c >making dnbinom.d from dnbinom.c >making pnbinom.d from pnbinom.c >making qnbinom.d from qnbinom.c >making rnbinom.d from rnbinom.c >making dpois.d from dpois.c >making ppois.d from ppois.c >making qpois.d from qpois.c >making rpois.d from rpois.c >making dweibull.d from dweibull.c >making pweibull.d from pweibull.c >making qweibull.d from qweibull.c >making rweibull.d from rweibull.c >making dlogis.d from dlogis.c >making plogis.d from plogis.c >making qlogis.d from qlogis.c >making rlogis.d from rlogis.c >making dnchisq.d from dnchisq.c >making pnchisq.d from pnchisq.c >making qnchisq.d from qnchisq.c >making dnbeta.d from dnbeta.c >making pnbeta.d from pnbeta.c >making qnbeta.d from qnbeta.c >making pnf.d from pnf.c >making pnt.d from pnt.c >making qnf.d from qnf.c >making qnt.d from qnt.c >making ptukey.d from ptukey.c >making qtukey.d from qtukey.c >making toms708.d from toms708.c >making wilcox.d from wilcox.c >making signrank.d from signrank.c >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/nmath' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/nmath' >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c mlutils.c -o mlutils.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c d1mach.c -o d1mach.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c i1mach.c -o i1mach.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c fmax2.c -o fmax2.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c fmin2.c -o fmin2.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c fprec.c -o fprec.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c fround.c -o fround.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c ftrunc.c -o ftrunc.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c sign.c -o sign.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c fsign.c -o fsign.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c imax2.c -o imax2.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c imin2.c -o imin2.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c chebyshev.c -o chebyshev.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c log1p.c -o log1p.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c expm1.c -o expm1.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c lgammacor.c -o lgammacor.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c gammalims.c -o gammalims.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c stirlerr.c -o stirlerr.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c bd0.c -o bd0.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c gamma.c -o gamma.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c lgamma.c -o lgamma.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c gamma_cody.c -o gamma_cody.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c beta.c -o beta.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c lbeta.c -o lbeta.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c polygamma.c -o polygamma.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c bessel_i.c -o bessel_i.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c bessel_j.c -o bessel_j.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c bessel_k.c -o bessel_k.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c bessel_y.c -o bessel_y.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c choose.c -o choose.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c snorm.c -o snorm.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c sexp.c -o sexp.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dgamma.c -o dgamma.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pgamma.c -o pgamma.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qgamma.c -o qgamma.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rgamma.c -o rgamma.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dbeta.c -o dbeta.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pbeta.c -o pbeta.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qbeta.c -o qbeta.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rbeta.c -o rbeta.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dunif.c -o dunif.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c punif.c -o punif.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qunif.c -o qunif.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c runif.c -o runif.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dnorm.c -o dnorm.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pnorm.c -o pnorm.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qnorm.c -o qnorm.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rnorm.c -o rnorm.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dlnorm.c -o dlnorm.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c plnorm.c -o plnorm.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qlnorm.c -o qlnorm.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rlnorm.c -o rlnorm.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c df.c -o df.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pf.c -o pf.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qf.c -o qf.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rf.c -o rf.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dnf.c -o dnf.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dt.c -o dt.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pt.c -o pt.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qt.c -o qt.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rt.c -o rt.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dnt.c -o dnt.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dchisq.c -o dchisq.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pchisq.c -o pchisq.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qchisq.c -o qchisq.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rchisq.c -o rchisq.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rnchisq.c -o rnchisq.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dbinom.c -o dbinom.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pbinom.c -o pbinom.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qbinom.c -o qbinom.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rbinom.c -o rbinom.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rmultinom.c -o rmultinom.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dcauchy.c -o dcauchy.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pcauchy.c -o pcauchy.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qcauchy.c -o qcauchy.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rcauchy.c -o rcauchy.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dexp.c -o dexp.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pexp.c -o pexp.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qexp.c -o qexp.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rexp.c -o rexp.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dgeom.c -o dgeom.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pgeom.c -o pgeom.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qgeom.c -o qgeom.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rgeom.c -o rgeom.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dhyper.c -o dhyper.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c phyper.c -o phyper.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qhyper.c -o qhyper.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rhyper.c -o rhyper.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dnbinom.c -o dnbinom.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pnbinom.c -o pnbinom.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qnbinom.c -o qnbinom.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rnbinom.c -o rnbinom.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dpois.c -o dpois.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c ppois.c -o ppois.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qpois.c -o qpois.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rpois.c -o rpois.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dweibull.c -o dweibull.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pweibull.c -o pweibull.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qweibull.c -o qweibull.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rweibull.c -o rweibull.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dlogis.c -o dlogis.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c plogis.c -o plogis.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qlogis.c -o qlogis.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rlogis.c -o rlogis.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dnchisq.c -o dnchisq.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pnchisq.c -o pnchisq.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qnchisq.c -o qnchisq.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dnbeta.c -o dnbeta.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pnbeta.c -o pnbeta.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qnbeta.c -o qnbeta.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pnf.c -o pnf.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pnt.c -o pnt.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qnf.c -o qnf.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qnt.c -o qnt.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c ptukey.c -o ptukey.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qtukey.c -o qtukey.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c toms708.c -o toms708.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c wilcox.c -o wilcox.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c signrank.c -o signrank.o >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/nmath' >make[2]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/nmath' >make[2]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/unix' >config.status: creating src/unix/Makefile >make[2]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/unix' >make[2]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/unix' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/unix' >making dynload.d from dynload.c >making edit.d from edit.c >making stubs.d from stubs.c >making system.d from system.c >making sys-unix.d from sys-unix.c >making sys-std.d from sys-std.c >making X11.d from X11.c >making aqua.d from aqua.c >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/unix' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/unix' >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dynload.c -o dynload.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c edit.c -o edit.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c stubs.c -o stubs.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c system.c -o system.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c sys-unix.c -o sys-unix.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c sys-std.c -o sys-std.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c X11.c -o X11.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c aqua.c -o aqua.o >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c Rembedded.c -o Rembedded.o >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/unix' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/unix' >x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -DR_HOME='"/usr/lib64/R"' -o Rscript \ > ./Rscript.c >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/unix' >make[2]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/unix' >make[2]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/main' >config.status: creating src/main/Makefile >make[2]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/main' >make[2]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/main' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/main' >making CConverters.d from CConverters.c >making CommandLineArgs.d from CommandLineArgs.c >making Rdynload.d from Rdynload.c >making Renviron.d from Renviron.c >making RNG.d from RNG.c >making apply.d from apply.c >making arithmetic.d from arithmetic.c >making apse.d from apse.c >making array.d from array.c >making attrib.d from attrib.c >making base.d from base.c >making bind.d from bind.c >making builtin.d from builtin.c >making character.d from character.c >making coerce.d from coerce.c >making colors.d from colors.c >making complex.d from complex.c >making connections.d from connections.c >making context.d from context.c >making cov.d from cov.c >making cum.d from cum.c >making dcf.d from dcf.c >making datetime.d from datetime.c >making debug.d from debug.c >making deparse.d from deparse.c >making deriv.d from deriv.c >making dotcode.d from dotcode.c >making dounzip.d from dounzip.c >making dstruct.d from dstruct.c >making duplicate.d from duplicate.c >making engine.d from engine.c >making envir.d from envir.c >making errors.d from errors.c >making eval.d from eval.c >making format.d from format.c >making fourier.d from fourier.c >making gevents.d from gevents.c >making gram.d from gram.c >making gram-ex.d from gram-ex.c >making graphics.d from graphics.c >making identical.d from identical.c >making internet.d from internet.c >making iosupport.d from iosupport.c >making lapack.d from lapack.c >making list.d from list.c >making localecharset.d from localecharset.c >making logic.d from logic.c >making main.d from main.c >making mapply.d from mapply.c >making match.d from match.c >making memory.d from memory.c >making model.d from model.c >making names.d from names.c >making objects.d from objects.c >making optim.d from optim.c >making optimize.d from optimize.c >making options.d from options.c >making par.d from par.c >making paste.d from paste.c >making pcre.d from pcre.c >making platform.d from platform.c >making plot.d from plot.c >making plot3d.d from plot3d.c >making plotmath.d from plotmath.c >making print.d from print.c >making printarray.d from printarray.c >making printvector.d from printvector.c >making printutils.d from printutils.c >making qsort.d from qsort.c >making random.d from random.c >making regex.d from regex.c >making registration.d from registration.c >making relop.d from relop.c >making rlocale.d from rlocale.c >making saveload.d from saveload.c >making scan.d from scan.c >making seq.d from seq.c >making serialize.d from serialize.c >making size.d from size.c >making sort.d from sort.c >making source.d from source.c >making split.d from split.c >making sprintf.d from sprintf.c >making startup.d from startup.c >making subassign.d from subassign.c >making subscript.d from subscript.c >making subset.d from subset.c >making summary.d from summary.c >making sysutils.d from sysutils.c >making unique.d from unique.c >making util.d from util.c >making version.d from version.c >making vfonts.d from vfonts.c >making Rmain.d from Rmain.c >making alloca.d from alloca.c >making acosh.d from acosh.c >making asinh.d from asinh.c >making atanh.d from atanh.c >making mkdtemp.d from mkdtemp.c >making snprintf.d from snprintf.c >making strdup.d from strdup.c >making strncasecmp.d from strncasecmp.c >making vsnprintf.d from vsnprintf.c >making xspline.d from xspline.c >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/main' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/main' >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c CConverters.c -o CConverters.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c CommandLineArgs.c -o CommandLineArgs.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c Rdynload.c -o Rdynload.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c Renviron.c -o Renviron.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c RNG.c -o RNG.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c apply.c -o apply.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c arithmetic.c -o arithmetic.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c apse.c -o apse.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c array.c -o array.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c attrib.c -o attrib.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c base.c -o base.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c bind.c -o bind.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c builtin.c -o builtin.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c character.c -o character.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c coerce.c -o coerce.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c colors.c -o colors.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c complex.c -o complex.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c connections.c -o connections.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c context.c -o context.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c cov.c -o cov.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c cum.c -o cum.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dcf.c -o dcf.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c datetime.c -o datetime.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c debug.c -o debug.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c deparse.c -o deparse.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c deriv.c -o deriv.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dotcode.c -o dotcode.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dounzip.c -o dounzip.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dstruct.c -o dstruct.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c duplicate.c -o duplicate.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c engine.c -o engine.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c envir.c -o envir.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c errors.c -o errors.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c eval.c -o eval.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c format.c -o format.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c fourier.c -o fourier.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c gevents.c -o gevents.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c gram.c -o gram.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c gram-ex.c -o gram-ex.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c graphics.c -o graphics.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c identical.c -o identical.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c internet.c -o internet.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c iosupport.c -o iosupport.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c lapack.c -o lapack.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c list.c -o list.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c localecharset.c -o localecharset.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c logic.c -o logic.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c main.c -o main.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c mapply.c -o mapply.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c match.c -o match.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c memory.c -o memory.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c model.c -o model.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c names.c -o names.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c objects.c -o objects.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c optim.c -o optim.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c optimize.c -o optimize.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c options.c -o options.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c par.c -o par.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c paste.c -o paste.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c pcre.c -o pcre.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c platform.c -o platform.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c plot.c -o plot.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c plot3d.c -o plot3d.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c plotmath.c -o plotmath.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c print.c -o print.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c printarray.c -o printarray.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c printvector.c -o printvector.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c printutils.c -o printutils.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c qsort.c -o qsort.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c random.c -o random.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c regex.c -o regex.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c registration.c -o registration.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c relop.c -o relop.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rlocale.c -o rlocale.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c saveload.c -o saveload.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c scan.c -o scan.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c seq.c -o seq.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c serialize.c -o serialize.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c size.c -o size.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c sort.c -o sort.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c source.c -o source.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c split.c -o split.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c sprintf.c -o sprintf.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c startup.c -o startup.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c subassign.c -o subassign.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c subscript.c -o subscript.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c subset.c -o subset.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c summary.c -o summary.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c sysutils.c -o sysutils.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c unique.c -o unique.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c util.c -o util.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c version.c -o version.o >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c vfonts.c -o vfonts.o >gfortran -fpic -g -O2 -c xxxpr.f -o xxxpr.o >x86_64-pc-linux-gnu-gcc -shared -Wl,--as-needed -o libR.so CConverters.o CommandLineArgs.o Rdynload.o Renviron.o RNG.o apply.o arithmetic.o apse.o array.o attrib.o base.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cov.o cum.o dcf.o datetime.o debug.o deparse.o deriv.o dotcode.o dounzip.o dstruct.o duplicate.o engine.o envir.o errors.o eval.o format.o fourier.o gevents.o gram.o gram-ex.o graphics.o identical.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o model.o names.o objects.o optim.o optimize.o options.o par.o paste.o pcre.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o random.o regex.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o size.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o unique.o util.o version.o vfonts.o xxxpr.o `ls ../appl/*.o ../nmath/*.o ../unix/*.o 2>/dev/null|grep -v /ext-` -L../../lib -lRblas -lgfortran -lm -lgcc_s ../extra/zlib/libz.a ../extra/bzip2/libbz2.a ../extra/pcre/libpcre.a -lreadline -ldl -lm >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/main' >mkdir -p -- /home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/bin/exec >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/main' >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/main' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/main' >x86_64-pc-linux-gnu-gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c Rmain.c -o Rmain.o >x86_64-pc-linux-gnu-gcc -Wl,--export-dynamic -Wl,--as-needed -o R.bin Rmain.o -L../../lib -lR -lRblas >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/main' >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/main' >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/main' >make[2]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/main' >make[2]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/X11' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/X11' >making dataentry.d from dataentry.c >making devX11.d from devX11.c >making rotated.d from rotated.c >making rbitmap.d from rbitmap.c >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/X11' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/X11' >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c dataentry.c -o dataentry.o >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c devX11.c -o devX11.o >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rotated.c -o rotated.o >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c rbitmap.c -o rbitmap.o >x86_64-pc-linux-gnu-gcc -shared -Wl,--as-needed -o R_X11.so dataentry.o devX11.o rotated.o rbitmap.o -lSM -lICE -L/usr/lib -lX11 -lXt -lXmu -ljpeg -lpng -lz -L../../../lib -lR -lm >make[5]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/X11' >mkdir -p -- /home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/modules >make[5]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/X11' >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/X11' >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/X11' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/internet' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/internet' >making Rsock.d from Rsock.c >making internet.d from internet.c >making nanoftp.d from nanoftp.c >making nanohttp.d from nanohttp.c >making sock.d from sock.c >making sockconn.d from sockconn.c >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/internet' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/internet' >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c Rsock.c -o Rsock.o >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c internet.c -o internet.o >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c nanoftp.c -o nanoftp.o >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c nanohttp.c -o nanohttp.o >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c sock.c -o sock.o >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -fvisibility=hidden -c sockconn.c -o sockconn.o >x86_64-pc-linux-gnu-gcc -shared -Wl,--as-needed -o internet.so Rsock.o internet.o nanoftp.o nanohttp.o sock.o sockconn.o -L../../../lib -lR >make[5]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/internet' >make[5]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/internet' >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/internet' >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/internet' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/lapack' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/lapack' >making Lapack.d from Lapack.c >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/lapack' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/lapack' >gfortran -fpic -g -O2 -ffloat-store -c dlamch.f -o dlamch.o >gfortran -fpic -g -O2 -c dlapack0.f -o dlapack0.o >gfortran -fpic -g -O2 -c dlapack1.f -o dlapack1.o >gfortran -fpic -g -O2 -c dlapack2.f -o dlapack2.o >gfortran -fpic -g -O2 -c dlapack3.f -o dlapack3.o >gfortran -fpic -g -O2 -c dlapack4.f -o dlapack4.o >gfortran -fpic -g -O2 -c cmplx.f -o cmplx.o >x86_64-pc-linux-gnu-gcc -shared -Wl,--as-needed -o libRlapack.so dlamch.o dlapack0.o dlapack1.o dlapack2.o dlapack3.o dlapack4.o cmplx.o -L../../../lib -lRblas >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/lapack' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/lapack' >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c Lapack.c -o Lapack.o >x86_64-pc-linux-gnu-gcc -shared -Wl,--as-needed -o lapack.so Lapack.o -L../../../lib -lR -L../../../lib -lRlapack -L../../../lib -lRblas -lgfortran -lm -lgcc_s >make[5]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/lapack' >/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/lib/libRlapack.so is unchanged >make[5]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/lapack' >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/lapack' >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/lapack' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/vfonts' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/vfonts' >making g_alab_her.d from g_alab_her.c >making g_cntrlify.d from g_cntrlify.c >making g_fontdb.d from g_fontdb.c >making g_her_glyph.d from g_her_glyph.c >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/vfonts' >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/vfonts' >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c g_alab_her.c -o g_alab_her.o >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c g_cntrlify.c -o g_cntrlify.o >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c g_fontdb.c -o g_fontdb.o >x86_64-pc-linux-gnu-gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c g_her_glyph.c -o g_her_glyph.o >x86_64-pc-linux-gnu-gcc -shared -Wl,--as-needed -o vfonts.so g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o -L../../../lib -lR -lm >make[5]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/vfonts' >make[5]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/vfonts' >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/vfonts' >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules/vfonts' >make[2]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/modules' >make[2]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library' >mkdir -p -- ../../library >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/profile' >building system startup profile >mkdir -p -- ../../../library/base/R >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/profile' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/base' >building package 'base' >mkdir -p -- ../../../library/base/demo >mkdir -p -- ../../../library/base/po >mkdir -p -- ../../../library/base/man >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/base' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/tools' >building package 'tools' >mkdir -p -- ../../../library/tools/R >mkdir -p -- ../../../library/tools/po >mkdir -p -- ../../../library/tools/man >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/tools/src' >making text.d from text.c >making init.d from init.c >making Rmd5.d from Rmd5.c >making md5.d from md5.c >make[5]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/tools/src' >make[5]: `Makedeps' is up to date. >make[5]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/tools/src' >make[5]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/tools/src' >x86_64-pc-linux-gnu-gcc -I../../../../include -I../../../../include -I/usr/local/include -fvisibility=hidden -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c text.c -o text.o >x86_64-pc-linux-gnu-gcc -I../../../../include -I../../../../include -I/usr/local/include -fvisibility=hidden -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c init.c -o init.o >x86_64-pc-linux-gnu-gcc -I../../../../include -I../../../../include -I/usr/local/include -fvisibility=hidden -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c Rmd5.c -o Rmd5.o >x86_64-pc-linux-gnu-gcc -I../../../../include -I../../../../include -I/usr/local/include -fvisibility=hidden -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c md5.c -o md5.o >x86_64-pc-linux-gnu-gcc -shared -Wl,--as-needed -o tools.so text.o init.o Rmd5.o md5.o -L../../../../lib -lR >mkdir -p -- ../../../../library/tools/libs >make[5]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/tools/src' >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/tools/src' >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/tools' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/utils' >building package 'utils' >mkdir -p -- ../../../library/utils/R >mkdir -p -- ../../../library/utils/po >mkdir -p -- ../../../library/utils/Sweave >mkdir -p -- ../../../library/utils/man >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/utils' >make[3]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/grDevices' >building package 'grDevices' >mkdir -p -- ../../../library/grDevices/R >mkdir -p -- ../../../library/grDevices/po >mkdir -p -- ../../../library/grDevices/afm >mkdir -p -- ../../../library/grDevices/enc >mkdir -p -- ../../../library/grDevices/man >make[4]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/grDevices/src' >making chull.d from chull.c >making devNull.d from devNull.c >making devPicTeX.d from devPicTeX.c >making devPS.d from devPS.c >making devQuartz.d from devQuartz.c >making init.d from init.c >make[5]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/grDevices/src' >make[5]: `Makedeps' is up to date. >make[5]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/grDevices/src' >make[5]: Entering directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/grDevices/src' >x86_64-pc-linux-gnu-gcc -I../../../../include -I../../../../include -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c chull.c -o chull.o >x86_64-pc-linux-gnu-gcc -I../../../../include -I../../../../include -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c devNull.c -o devNull.o >x86_64-pc-linux-gnu-gcc -I../../../../include -I../../../../include -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c devPicTeX.c -o devPicTeX.o >x86_64-pc-linux-gnu-gcc -I../../../../include -I../../../../include -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c devPS.c -o devPS.o >x86_64-pc-linux-gnu-gcc -I../../../../include -I../../../../include -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c devQuartz.c -o devQuartz.o >x86_64-pc-linux-gnu-gcc -I../../../../include -I../../../../include -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -march=nocona -ggdb -O2 -pipe -std=gnu99 -c init.c -o init.o >x86_64-pc-linux-gnu-gcc -shared -Wl,--as-needed -o grDevices.so chull.o devNull.o devPicTeX.o devPS.o devQuartz.o init.o -L../../../../lib -lR >mkdir -p -- ../../../../library/grDevices/libs >make[5]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/grDevices/src' >make[4]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/grDevices/src' >Warning in solve.default(rgb) : unable to load shared library '/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/modules//lapack.so': > /home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/lib/libRlapack.so: undefined symbol: _gfortran_concat_string >Error in solve.default(rgb) : lapack routines cannot be loaded >Error: unable to load R code in package 'grDevices' >Execution halted >make[3]: *** [all] Error 1 >make[3]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library/grDevices' >make[2]: *** [R] Error 1 >make[2]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src/library' >make[1]: *** [R] Error 1 >make[1]: Leaving directory `/home/tmp/portage/dev-lang/R-2.5.1/work/R-2.5.1/src' >make: *** [R] Error 1 > [31;01m*[0m > [31;01m*[0m ERROR: dev-lang/R-2.5.1 failed. > [31;01m*[0m Call stack: > [31;01m*[0m ebuild.sh, line 1654: Called dyn_compile > [31;01m*[0m ebuild.sh, line 990: Called qa_call 'src_compile' > [31;01m*[0m ebuild.sh, line 44: Called src_compile > [31;01m*[0m R-2.5.1.ebuild, line 81: Called die > [31;01m*[0m > [31;01m*[0m emake failed > [31;01m*[0m If you need support, post the topmost build error, and the call stack if relevant. > [31;01m*[0m A complete build log is located at '/home/tmp/portage/dev-lang/R-2.5.1/temp/build.log'. > [31;01m*[0m
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bug 191287
: 130029