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Gentoo's Bugzilla – Attachment 12781 Details for
Bug 22202
new Ebuild: app-sci/bioperl-1.2.1
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[patch]
biodbgff-enable-1.2.1.patch
biodbgff-enable-1.2.1.patch (text/plain), 2.14 KB, created by
Gontran Zepeda
on 2003-06-04 08:35:12 UTC
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Description:
biodbgff-enable-1.2.1.patch
Filename:
MIME Type:
Creator:
Gontran Zepeda
Created:
2003-06-04 08:35:12 UTC
Size:
2.14 KB
patch
obsolete
>--- bioperl-1.2.1/Makefile.PL.orig 2003-05-29 13:47:54.000000000 +0100 >+++ bioperl-1.2.1/Makefile.PL 2003-05-29 13:49:30.000000000 +0100 >@@ -83,8 +83,6 @@ > # Prompt user for BioDBGFF stuff > # > >-if( eval { require DBI } && grep {/mysql/} DBI->available_drivers) { >- my $proceed = prompt("Do you want to run the BioDBGFF tests (requires a mysql database) y/n",'n'); > if( $proceed =~ /^[yY]/) { > my $cfg = {dbd_driver => 'mysql'}; > GFFQueryDb($cfg,{'prompt'=>1,'verbose'=>1}); >@@ -99,7 +97,6 @@ > unlink "t/do_biodbgff.tests"; > } > } >-} > > > ############################################################################ >@@ -124,37 +121,11 @@ > my $d = lc $driver; > my $prompt = $options->{'prompt'}; > >- my $test_db = exists($options->{"$d-test-db"}) ? >- $options->{"$d-test-db"} : ($cfg->{'test_db'} || 'test'); >- $test_db = prompt >- ("Which database should I use for testing the $db drivers?", >- $test_db) if $prompt; >- >- my $test_host = exists($options->{"$d-test-host"}) ? >- $options->{"$d-test-host"} : ($cfg->{'test_host'} || 'localhost'); >- $test_host = prompt >- ("On which host is database $test_db running (hostname, ip address or host:port)", $test_host) if $prompt; >- >- my($test_user, $test_pass); >- >- $test_user = exists($options->{"$d-test-user"}) ? >- $options->{"$d-test-user"} : ($cfg->{'test_user'} || "undef"); >- $test_user = prompt >- ("User name for connecting to database $test_db?", $test_user) >- if $prompt; >- $test_user = undef if $test_user eq 'undef'; >- >- $test_pass = exists($options->{"$d-test-pass"}) ? >- $options->{"$d-test-pass"} : ($cfg->{'test_pass'} || "undef"); >- $test_pass = prompt >- ("Password for connecting to database $test_db?", $test_pass) >- if $prompt; >- $test_pass = undef if $test_pass eq 'undef'; >- >- $cfg->{'test_db'} = $test_db; >- $cfg->{'test_host'} = $test_host; >- $cfg->{'test_user'} = $test_user; >- $cfg->{'test_pass'} = $test_pass; >+ $cfg->{'test_db'} = "test"; >+ $cfg->{'test_host'} = "localhost"; >+ $cfg->{'test_user'} = undef; >+ $cfg->{'test_pass'} = undef; >+ > if ($test_host eq 'undef' || $test_host eq 'localhost') { > $test_host = ''; > }
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