/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: /var/tmp/portage/sci-biology/salmon-0.10.2/work/salmon-0.10.2/external/install/lib/libbwa.a(bwa.o):/var/tmp/portage/sci-biology/salmon-0.10.2/work/salmon-0.10.2/external/bwa-0.7.12.5/bwa.c:18: multiple definition of `bwa_pg'; CMakeFiles/salmon.dir/SalmonQuantify.cpp.o:(.data.rel.local+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: /var/tmp/portage/sci-biology/salmon-0.10.2/work/salmon-0.10.2/external/install/lib/libstaden-read.a(libstaden_read_la-open_trace_file.o): in function `find_file_url': ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.1_no-multilib-libressl_science-20201116-220441 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-10.2.0 * /usr/lib/llvm/11 11.0.0 Available Python interpreters, in order of preference: [1] python3.7 [2] python3.9 (fallback) [3] python3.8 (fallback) [4] python2.7 (fallback) The following VMs are available for generation-2: *) AdoptOpenJDK 8.272_p10 [openjdk-bin-8] Available Java Virtual Machines: [1] openjdk-bin-8 system-vm The Glorious Glasgow Haskell Compilation System, version 8.8.4 timestamp(s) of HEAD at this tinderbox image: /var/db/repos/gentoo Thu Nov 19 12:05:45 PM UTC 2020 /var/db/repos/libressl Sat Nov 7 03:06:11 PM UTC 2020 emerge -qpvO sci-biology/salmon [ebuild N ] sci-biology/salmon-0.10.2
Created attachment 673042 [details] emerge-info.txt
Created attachment 673045 [details] emerge-history.txt
Created attachment 673048 [details] environment
Created attachment 673051 [details] etc.portage.tbz2
Created attachment 673054 [details] logs.tbz2
Created attachment 673057 [details] sci-biology:salmon-0.10.2:20201119-122742.log.bz2
Created attachment 673060 [details] temp.tbz2