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Bug 741526 - sci-libs/scikits_image-0.13.0-r1 fails to compile
Summary: sci-libs/scikits_image-0.13.0-r1 fails to compile
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Aisha Tammy
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2020-09-10 14:18 UTC by Agostino Sarubbo
Modified: 2020-11-15 11:21 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log,743.85 KB, text/plain)
2020-09-10 14:18 UTC, Agostino Sarubbo
Details

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Description Agostino Sarubbo gentoo-dev 2020-09-10 14:18:33 UTC
https://blogs.gentoo.org/ago/2020/07/04/gentoo-tinderbox/

Issue: sci-libs/scikits_image-0.13.0-r1 fails to compile.
Discovered on: amd64 (internal ref: tinderbox)

NOTE:
This machine uses a clang/LLVM toolchain.
If you think that this issue is strictly related to clang/LLVM please block bug 408963. If you think that this issue is strictly related to the LLD linker, please block bug 731004.
This machine uses also GLIBC-2.32. If you think that this issue is strictly related to GLIBC please block bug 736174.
Comment 1 Agostino Sarubbo gentoo-dev 2020-09-10 14:18:38 UTC
Created attachment 659388 [details]
build.log

build log and emerge --info
Comment 2 Jesper Saxtorph 2020-10-24 13:07:09 UTC
I have the same problem with the standard gcc toolchain.

It is related to python 3.7. Compiling only with python 3.6 works.

The first error in both Agostinos log and my own log is:
Agostinos log:
skimage/_shared/transform.c:15281:21: error: no member named 'exc_type' in 'struct _ts'
My log:
skimage/_shared/transform.c:15281:21: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?

And then there is a ton of similar errors related to PyThreadState.

Maybe it is time for a version bump (bug 729990).
Comment 3 Jesper Saxtorph 2020-10-24 13:10:15 UTC
Well, I just saw, this is actually a duplicate of bug 729800
Comment 4 Aisha Tammy 2020-11-15 11:21:02 UTC
fixed, a newer version of scikit-image is now in the tree and builds fine
https://gitweb.gentoo.org/repo/gentoo.git/tree/sci-libs/scikit-image