>>> Unpacking rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz to /var/tmp/portage/sci-biology/rmblast-1.2-r1/work >>> Unpacking rmblast-1.2-gcc47.patch.bz2 to /var/tmp/portage/sci-biology/rmblast-1.2-r1/work >>> Source unpacked in /var/tmp/portage/sci-biology/rmblast-1.2-r1/work >>> Preparing source in /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++ ... sed: -e expression #3, char 87: unknown option to `s' * ERROR: sci-biology/rmblast-1.2-r1::gentoo failed (prepare phase): ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.1-20200226-021723 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-9.2.0 * clang: clang version 9.0.1 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/lib/llvm/9/bin llvm: 9.0.1 Available Python interpreters, in order of preference: [1] python3.8 [2] python3.6 [3] python3.7 (fallback) [4] python2.7 (fallback) [5] pypy3 (fallback) Available Ruby profiles: [1] ruby24 (with Rubygems) [2] ruby25 (with Rubygems) * Available Rust versions: [1] rust-1.41.0 * java-config: The following VMs are available for generation-2: *) AdoptOpenJDK JRE 8.242_p08 [openjdk-jre-bin-8] Available Java Virtual Machines: [1] openjdk-jre-bin-8 system-vm ghc: The Glorious Glasgow Haskell Compilation System, version 8.0.2 repository: ==> /var/db/repos/gentoo/metadata/timestamp.chk <== Sun, 01 Mar 2020 20:37:27 +0000 emerge -qpvO sci-biology/rmblast [ebuild N ] sci-biology/rmblast-1.2-r1
Created attachment 616742 [details] emerge-info.txt
Created attachment 616744 [details] emerge-history.txt
Created attachment 616746 [details] environment
Created attachment 616748 [details] etc.portage.tbz2
Created attachment 616750 [details] sci-biology:rmblast-1.2-r1:20200301-211351.log
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=d5c451e59a806404de4c3a9428a10c04a4f77dfc commit d5c451e59a806404de4c3a9428a10c04a4f77dfc Author: Jakov Smolić <jsmolic@gentoo.org> AuthorDate: 2022-02-10 09:16:27 +0000 Commit: Jakov Smolić <jsmolic@gentoo.org> CommitDate: 2022-02-10 09:17:33 +0000 sci-biology/rmblast: treeclean Closes: https://bugs.gentoo.org/515962 Closes: https://bugs.gentoo.org/579248 Closes: https://bugs.gentoo.org/664518 Closes: https://bugs.gentoo.org/711246 Closes: https://bugs.gentoo.org/716172 Closes: https://bugs.gentoo.org/457972 Closes: https://bugs.gentoo.org/724466 Closes: https://bugs.gentoo.org/828706 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org> profiles/package.mask | 1 - sci-biology/rmblast/Manifest | 2 -- sci-biology/rmblast/metadata.xml | 8 ------ sci-biology/rmblast/rmblast-1.2-r1.ebuild | 47 ------------------------------- 4 files changed, 58 deletions(-)