x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -O2 -pipe -march=native -fno-common -c simul.c x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -O2 -pipe -march=native -fno-common -c stars.c /bin/sh ../libtool --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -fno-common -Wl,-O1 -Wl,--as-needed -o sky alterimage.o fft.o fitswcs.o galaxies.o image.o imaout.o list.o main.o makeit.o poly.o prefs.o psf.o random.o simul.o stars.o ./fits/libfits.a ./wcs/libwcs_c.a -lfftw3f -lm libtool: link: x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -fno-common -Wl,-O1 -Wl,--as-needed -o sky alterimage.o fft.o fitswcs.o galaxies.o image.o imaout.o list.o main.o makeit.o poly.o prefs.o psf.o random.o simul.o stars.o ./fits/libfits.a ./wcs/libwcs_c.a -lfftw3f -lm /usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: fft.o:(.bss+0x1b80): multiple definition of `gstr'; alterimage.o:(.bss+0x1b60): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: fft.o:(.bss+0x20): multiple definition of `prefs'; alterimage.o:(.bss+0x0): first defined here ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.1-libressl-20200125-183534 ------------------------------------------------------------------- Please see the tracker bug for details. gcc-config -l: [1] x86_64-pc-linux-gnu-9.2.0 * clang: clang version 9.0.1 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/lib/llvm/9/bin llvm: 9.0.1 Available Python interpreters, in order of preference: [1] python3.8 [2] python3.7 [3] python3.6 [4] python2.7 (fallback) Available Ruby profiles: [1] ruby24 (with Rubygems) [2] ruby25 (with Rubygems) * Available Rust versions: [1] rust-1.40.0 * java-config: The following VMs are available for generation-2: *) AdoptOpenJDK 8.242_p08 [openjdk-bin-8] Available Java Virtual Machines: [1] openjdk-bin-8 system-vm ghc: The Glorious Glasgow Haskell Compilation System, version 7.10.3 repository: ==> /var/db/repos/gentoo/metadata/timestamp.chk <== Wed, 29 Jan 2020 00:26:22 +0000 emerge -qpvO sci-astronomy/skymaker [ebuild N ] sci-astronomy/skymaker-3.10.5 USE="-threads"
Created attachment 607616 [details] emerge-info.txt
Created attachment 607618 [details] emerge-history.txt
Created attachment 607620 [details] environment
Created attachment 607622 [details] etc.portage.tbz2
Created attachment 607624 [details] logs.tbz2
Created attachment 607626 [details] sci-astronomy:skymaker-3.10.5:20200129-015411.log
Created attachment 607628 [details] temp.tbz2
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=15811784574e3886dd48185511c0b8444bae5c52 commit 15811784574e3886dd48185511c0b8444bae5c52 Author: David Seifert <soap@gentoo.org> AuthorDate: 2020-10-03 23:09:53 +0000 Commit: David Seifert <soap@gentoo.org> CommitDate: 2020-10-03 23:09:53 +0000 sci-astronomy/skymaker: Fix -fno-common Closes: https://bugs.gentoo.org/707164 Package-Manager: Portage-3.0.8, Repoman-3.0.1 Signed-off-by: David Seifert <soap@gentoo.org> .../files/skymaker-3.10.5-fno-common.patch | 66 ++++++++++++++++++++++ sci-astronomy/skymaker/skymaker-3.10.5.ebuild | 10 ++-- 2 files changed, 72 insertions(+), 4 deletions(-)
libtool: link: x86_64-pc-linux-gnu-gcc -march=native -fstack-protector-all -O2 -pipe -fdiagnostics-color=always -frecord-gcc-switches -U_FORTIFY_SOURCE -D_FORTIFY_SOURCE=3 -fstack-clash-protection -flto=4 -Werror=odr -Werror=lto-type-mismatch -Werror=strict-aliasing -Wformat -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Werror=int-conversion -Werror=incompatible-pointer-types -Wl,-O1 -Wl,--as-needed -flto=4 -Werror=odr -Werror=lto-type-mismatch -Werror=strict-aliasing -Wl,--defsym=__gentoo_check_ldflags__=0 -o sky alterimage.o fft.o fitswcs.o galaxies.o image.o imaout.o list.o main.o makeit.o poly.o prefs.o psf.o random.o simul.o stars.o ./fits/libfits.a ./wcs/libwcs_c.a -lfftw3f -lm globals.h:32:25: error: type of 'gstr' does not match original declaration [-Werror=lto-type-mismatch] 32 | extern char gstr[MAXCHAR]; | ^ fits/fitscat.c:46:9: note: array types have different bounds 46 | char gstr[MAXCHAR]; | ^ fits/fitscat.c:46:9: note: 'gstr' was previously declared here lto1: some warnings being treated as errors lto-wrapper: fatal error: x86_64-pc-linux-gnu-gcc returned 1 exit status compilation terminated. /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: error: lto-wrapper failed collect2: error: ld returned 1 exit status The failing code was added by this fix. Upstream added a different fix.