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Bug 670690 - sci-chemistry/autodock-4.2.6 : [QA] Unrecognized configure options:
Summary: sci-chemistry/autodock-4.2.6 : [QA] Unrecognized configure options:
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal QA (vote)
Assignee: Gentoo Chemistry-Related Packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2018-11-08 16:25 UTC by Toralf Förster
Modified: 2020-07-02 20:54 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
etc.portage.tbz2 (etc.portage.tbz2,17.83 KB, application/x-bzip)
2018-11-08 16:25 UTC, Toralf Förster
Details

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Description Toralf Förster gentoo-dev 2018-11-08 16:25:17 UTC
QA: install
QA Notice: Unrecognized configure options:

	--enable-openmp
	--enable-openmp
QA: other
QA Notice: Package triggers severe warnings which indicate that it
           may exhibit random runtime failures.
calc_vina_potential.cpp:283:56: warning: array subscript 16384 is above array bounds of ‘Real [14][14]’ {aka ‘double [14][14]’} [-Warray-bounds]
Please do not file a Gentoo bug and instead report the above QA
issues directly to the upstream developers of this software.
Homepage: http://autodock.scripps.edu/

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.0-hardened_abi32+64_20181029-212829

  -------------------------------------------------------------------
Comment 1 Toralf Förster gentoo-dev 2018-11-08 16:25:20 UTC
Created attachment 554564 [details]
etc.portage.tbz2
Comment 2 Larry the Git Cow gentoo-dev 2020-07-02 20:54:11 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=4af58d4365b1c323106e4fcf0c07266d1438a63a

commit 4af58d4365b1c323106e4fcf0c07266d1438a63a
Author:     Pacho Ramos <pacho@gentoo.org>
AuthorDate: 2020-07-02 20:52:26 +0000
Commit:     Pacho Ramos <pacho@gentoo.org>
CommitDate: 2020-07-02 20:52:26 +0000

    sci-chemistry/autodock: Stop relying on python2
    
    Also remove false positive configure warnings (#670690) and fix typo at
    install time (#543270)
    
    Closes: https://bugs.gentoo.org/543270
    Closes: https://bugs.gentoo.org/670690
    Package-Manager: Portage-2.3.100, Repoman-2.3.22
    Signed-off-by: Pacho Ramos <pacho@gentoo.org>

 sci-chemistry/autodock/autodock-4.2.6.ebuild       | 68 +++++++++++++---------
 .../files/autodock-4.2.6-buildsystem.patch         | 12 ++--
 2 files changed, 46 insertions(+), 34 deletions(-)