^~~~ paths/long/VariantCallTools.cc: In member function ‘void EdgesOnRef::FilterAndModifyEdits(vec<triple<int, int, FeudalString<char> > >&, vec<std::pair<FeudalString<char>, FeudalString<char> > >&)’: paths/long/VariantCallTools.cc:1874:47: error: call of overloaded ‘abs(FeudalString<char>::size_type)’ is ambiguous - change[j-1].first.size()) < MinClumpSep) { ^ In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/7.2.0/include/g++-v7/cstdlib:75:0, ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.0-desktop_20171121-221602 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-7.2.0 * Available Python interpreters, in order of preference: [1] python3.4 [2] python2.7 (fallback) Available Ruby profiles: [1] ruby22 (with Rubygems) * java-config: The following VMs are available for generation-2: *) IcedTea JDK 3.6.0 [icedtea-bin-8] Available Java Virtual Machines: [1] icedtea-bin-8 system-vm emerge -qpv sci-biology/allpathslg [ebuild N ] sci-biology/allpathslg-52488-r2
Created attachment 506404 [details] emerge-info.txt
Created attachment 506406 [details] emerge-history.txt
Created attachment 506408 [details] environment
Created attachment 506410 [details] etc.portage.tbz2
Created attachment 506412 [details] logs.tbz2
Created attachment 506414 [details] sci-biology:allpathslg-52488-r2:20171124-140832.log
Created attachment 506416 [details] temp.tbz2
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=cd124fce591dc879a82805175313c4b2e0ef18a6 commit cd124fce591dc879a82805175313c4b2e0ef18a6 Author: David Seifert <soap@gentoo.org> AuthorDate: 2017-12-24 17:11:30 +0000 Commit: David Seifert <soap@gentoo.org> CommitDate: 2017-12-24 18:00:22 +0000 sci-biology/allpathslg: Fix building with GCC 7 Closes: https://bugs.gentoo.org/638724 Package-Manager: Portage-2.3.19, Repoman-2.3.6 sci-biology/allpathslg/allpathslg-52488-r2.ebuild | 5 +++-- sci-biology/allpathslg/files/allpathslg-52488-gcc7.patch | 13 +++++++++++++ 2 files changed, 16 insertions(+), 2 deletions(-)
