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Bug 551100 - git-r3.eclass - fatal: Path 'test' does not exist in 'refs/git-r3/app-crypt/johntheripper/0/__main__'
Summary: git-r3.eclass - fatal: Path 'test' does not exist in 'refs/git-r3/app-crypt/j...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Eclasses (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Rick Farina (Zero_Chaos)
URL:
Whiteboard:
Keywords:
Depends on:
Blocks: 506364
  Show dependency tree
 
Reported: 2015-06-03 19:07 UTC by Dennis Schridde
Modified: 2015-07-09 20:21 UTC (History)
3 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
Patch that should fix the issue (git-r3_submodule.patch,1.87 KB, patch)
2015-06-26 10:31 UTC, Michał Górny
Details | Diff
Working submodule patch (git-r3-submodule-r1.patch,1.93 KB, patch)
2015-06-26 20:39 UTC, Michał Górny
Details | Diff

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Description Dennis Schridde 2015-06-03 19:07:16 UTC
The ebuild of attachment #391170 [details] to bug #506364, which uses the git-r3.eclass, worked on 2014-12-07 18:42:14 UTC, but did not work anymore on 2015-04-30 21:22:58 UTC. I don't understand the reason for its failure, and thus ask for your help.

The first error is:
fatal: Path 'test' does not exist in 'refs/git-r3/app-crypt/johntheripper/0/__main__'

The full log:
>>> Emerging (1 of 1) app-crypt/johntheripper-1.8.0.9999::local
>>> Unpacking source...
 * Fetching git://github.com/magnumripper/JohnTheRipper.git ...
git fetch git://github.com/magnumripper/JohnTheRipper.git +refs/heads/bleeding-jumbo:refs/heads/bleeding-jumbo
remote: Counting objects: 72, done.
remote: Compressing objects: 100% (33/33), done.
remote: Total 72 (delta 37), reused 22 (delta 22), pack-reused 17
Unpacking objects: 100% (72/72), done.
From git://github.com/magnumripper/JohnTheRipper
   3b1892a..4f01399  bleeding-jumbo -> bleeding-jumbo
git symbolic-ref refs/git-r3/app-crypt/johntheripper/0/__main__ refs/heads/bleeding-jumbo
fatal: Path 'test' does not exist in 'refs/git-r3/app-crypt/johntheripper/0/__main__'
 * Fetching https://github.com/magnumripper/jtrTestSuite.git ...
git fetch https://github.com/magnumripper/jtrTestSuite.git --prune +refs/heads/*:refs/heads/* +refs/tags/*:refs/tags/* +refs/notes/*:refs/notes/* +HEAD:refs/git-r3/HEAD
fatal: Needed a single revision
git update-ref --no-deref refs/git-r3/app-crypt/johntheripper/0/test/__main__ refs/git-r3/app-crypt/johntheripper/0/__main__:test
fatal: refs/git-r3/app-crypt/johntheripper/0/__main__:test: not a valid SHA1
 * ERROR: app-crypt/johntheripper-1.8.0.9999::local failed (unpack phase):
 *   Referencing refs/git-r3/app-crypt/johntheripper/0/__main__:test failed (wrong ref?).
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_unpack
 *   environment, line 3111:  Called git-r3_src_unpack
 *   environment, line 2113:  Called git-r3_src_fetch
 *   environment, line 2107:  Called git-r3_fetch
 *   environment, line 2048:  Called git-r3_fetch 'https://github.com/magnumripper/jtrTestSuite.git' 'refs/git-r3/app-crypt/johntheripper/0/__main__:test' 'app-crypt/johntheripper/0/test'
 *   environment, line 2024:  Called die
 * The specific snippet of code:
 *                   die "Referencing ${remote_ref} failed (wrong ref?).";


Reproducible: Always




# emerge --info
Portage 2.2.20 (python 3.4.3-final-0, default/linux/amd64/13.0/desktop/plasma/systemd, gcc-4.9.2, glibc-2.20-r2, 4.0.4-gentoo x86_64)
=================================================================
System uname: Linux-4.0.4-gentoo-x86_64-AMD_Athlon-tm-_64_X2_Dual_Core_Processor_5000+-with-gentoo-2.2
KiB Mem:     6097496 total,    295468 free
KiB Swap:    7813116 total,   7590372 free
Timestamp of repository gentoo: Wed, 03 Jun 2015 18:15:01 +0000
sh bash 4.3_p39
ld GNU ld (Gentoo 2.25 p1.2) 2.25
ccache version 3.2.2 [disabled]
app-shells/bash:          4.3_p39::gentoo
dev-java/java-config:     2.2.0::gentoo
dev-lang/perl:            5.20.2-r1::gentoo
dev-lang/python:          2.7.10::gentoo, 3.3.5-r1::gentoo, 3.4.3::gentoo
dev-util/ccache:          3.2.2::gentoo
dev-util/cmake:           3.2.2::gentoo
dev-util/pkgconfig:       0.28-r3::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.16.3::gentoo
sys-apps/sandbox:         2.6-r1::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r1::gentoo
sys-devel/automake:       1.11.6-r1::gentoo, 1.12.6::gentoo, 1.13.4::gentoo, 1.15::gentoo
sys-devel/binutils:       2.25-r1::gentoo
sys-devel/gcc:            4.9.2::gentoo
sys-devel/gcc-config:     1.8::gentoo
sys-devel/libtool:        2.4.6-r1::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 4.0::gentoo (virtual/os-headers)
sys-libs/glibc:           2.20-r2::gentoo
Repositories:

gentoo
    location: /var/cache/portage/gentoo
    sync-type: rsync
    sync-uri: rsync://rsync.de.gentoo.org/gentoo-portage
    priority: -1000

kde
    location: /var/lib/layman/kde
    sync-type: laymansync
    sync-uri: git://anongit.gentoo.org/proj/kde.git
    masters: gentoo
    priority: 50

sage-on-gentoo
    location: /var/lib/layman/sage-on-gentoo
    sync-type: laymansync
    sync-uri: git://github.com/cschwan/sage-on-gentoo.git
    masters: gentoo
    priority: 50

local
    location: /var/cache/portage/local
    masters: gentoo
    priority: 100

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-pipe -O2 -march=athlon64-sse3"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/themes/oxygen-gtk/gtk-2.0 /usr/share/themes/oxygen-gtk/gtk-3.0 /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-pipe -O2 -march=athlon64-sse3"
DISTDIR="/var/cache/portage/distfiles"
EMERGE_DEFAULT_OPTS="--keep-going --nospinner"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs buildsyspkg compressdebug config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch parallel-install preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ http://distfiles.gentoo.org"
LANG="en_GB.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu"
MAKEOPTS="-j2"
PKGDIR="/var/cache/portage/packages"
PORTAGE_COMPRESS="xz"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac aacplus aacs acl acpi alsa amd64 avahi bash-completion bdplus berkdb bluetooth bluray branding bzip2 cairo caps cdda cddb cdio cdr celt cjk cli cracklib crypt cups cxx dbus declarative dirac dri dts dvb dvd dvdr egl emboss encode exif fam fax ffmpeg firefox flac fortran gdbm gif glamor gles gles2 gmp gpm gstreamer gtk ibus iconv ipv6 jpeg jpeg2k kde kipi ladspa latex lcms ldap libnotify libsecret lua_target_lua5-2 lv2 lz4 lzma lzo mad mmx mmxext mng modemmanager modplug modules mp3 mp4 mpeg mplayer mtp multilib mysql ncurses networkmanager nls nptl ogg openal opencl openexr opengl openmax openmp opus pam pango pch pcre pdf phonon plasma png policykit ppds pulseaudio qml qt3support qt4 qt5 readline rtmp samba scanner schroedinger sctp sdl semantic-desktop session speex spell sse sse2 ssl startup-notification subversion svg systemd tcpd theora threads tiff truetype udev udisks unicode upnp upower usb v4l vaapi vdpau vorbis vpx wavpack wayland webp widgets x264 x265 xattr xcb xcomposite xinerama xml xscreensaver xv xvid xz zeroconf zlib" ABI_X86="64" ALSA_CARDS="hda-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="stage words flow sheets" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="3dnow 3dnowext mmx mmxext sse sse2 sse3" DRACUT_MODULES="btrfs systemd" ELIBC="glibc" ENLIGHTENMENT_MODULES="*" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="pc" INPUT_DEVICES="evdev joystick" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de en en_GB ar fa" LIRC_DEVICES="devinput" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3 python3_4" RUBY_TARGETS="ruby22" USERLAND="GNU" VIDEO_CARDS="radeon r600" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
USE_PYTHON="2.7 3.3 3.4"
Unset:  CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

=================================================================
                        Package Settings
=================================================================

dev-vcs/git-2.4.2::gentoo was built with the following:
USE="blksha1 curl gpg gtk iconv nls pcre perl python threads webdav -cgi -cvs -doc -emacs -gnome-keyring -highlight -mediawiki (-ppcsha1) -subversion -test -tk -xinetd" ABI_X86="64" PYTHON_TARGETS="python2_7"
Comment 1 Dennis Schridde 2015-06-26 09:25:14 UTC
Is the git-r3.eclass still being maintained? Is it experimental and it's use discouraged?

That said, switching to git-2.eclass makes it work.

Works:
git-r3.eclass @ 2014-12-07 18:42:14 UTC
git-2.eclass @ 2015-06-26 09:23:52 UTC

Does not work:
git-r3.eclass @ 2015-04-30 21:22:58 UTC
git-r3.eclass @ 2015-06-26 09:23:52 UTC
Comment 2 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2015-06-26 10:24:27 UTC
It seems to be caused by 'test' directory for submodule not existing. I'll try to wrap up a patch today.
Comment 3 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2015-06-26 10:31:22 UTC
Created attachment 405782 [details, diff]
Patch that should fix the issue

Please try with this patch applied atop git-r3.eclass.
Comment 4 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2015-06-26 20:25:32 UTC
Comment on attachment 405782 [details, diff]
Patch that should fix the issue

Sadly, cat-file doesn't work on submodules and the patch breaks other ebuilds. Will ahve to investigate more.
Comment 5 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2015-06-26 20:39:48 UTC
Created attachment 405814 [details, diff]
Working submodule patch

Ok, this one should be correct. Confirmed to be working with both johntheripper and flaggie (the latter requiring submodules).
Comment 6 Dennis Schridde 2015-06-27 21:03:36 UTC
(In reply to Michał Górny from comment #5)
> Created attachment 405814 [details, diff] [details, diff]
> Working submodule patch
> 
> Ok, this one should be correct. Confirmed to be working with both
> johntheripper and flaggie (the latter requiring submodules).

I confirm, the patched eclass works with JTR.
Comment 7 Dennis Schridde 2015-07-09 20:10:29 UTC
Could you please patch the eclass in the Gentoo tree? Building JTR is still broken here, unless I patch manually.
Comment 8 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2015-07-09 20:21:37 UTC
I guess so. The patch was sent to review but received no reviews in 2 weeks.

+  09 Jul 2015; Michał Górny <mgorny@gentoo.org> git-r3.eclass:
+  Do not attempt to use submodules for which the checkout path does not exist
+  (has been removed), bug #551100.