Created attachment 391128 [details] build.log.bz2 'emerge scilab' fails with: ... genlib: Processing file: %_EVoid_p.sci genlib: Regenerate names and lib -- Build localization (.mo from .po) -- -- Building for en_US -- Creating ./locale/en_US/LC_MESSAGES/ 0 translated messages, 6326 untranslated messages. make[1]: Leaving directory '/var/tmp/portage/sci-mathematics/scilab-5.5.1/work/scilab-5.5.1' >>> Source compiled. * --------------------------- ACCESS VIOLATION SUMMARY --------------------------- * LOG FILE: "/var/log/sandbox/sandbox-10082.log" * VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: open_wr S: deny P: /proc/mtrr A: /proc/mtrr R: /proc/mtrr C: /var/tmp/portage/sci-mathematics/scilab-5.5.1/work/scilab-5.5.1/.libs/scilab-cli-bin -ns -noatomsautoload -f modules/functions/scripts/buildmacros/buildmacros.sce * -------------------------------------------------------------------------------- !!! When you file a bug report, please include the following information: GENTOO_VM=icedtea-7 CLASSPATH="" JAVA_HOME="/usr/lib64/icedtea7" JAVACFLAGS="-source 1.5 -target 1.5" COMPILER="" and of course, the output of emerge --info =scilab-5.5.1 root@lynx:/usr/local/portage/dev-python(51)# emerge --info =scilab-5.5.1 Portage 2.2.15 (python 2.7.8-final-0, default/linux/amd64/13.0/desktop, gcc-4.8.3, glibc-2.20, 3.17.4 x86_64) ================================================================= System Settings ================================================================= System uname: Linux-3.17.4-x86_64-Intel-R-_Core-TM-2_Duo_CPU_T9500_@_2.60GHz-with-gentoo-2.2 KiB Mem: 8101356 total, 3314940 free KiB Swap: 12582908 total, 12472344 free Timestamp of tree: Sun, 07 Dec 2014 08:00:01 +0000 sh bash 4.3_p30-r1 ld GNU ld (Gentoo 2.24 p1.4) 2.24 distcc[17190] (dcc_trace_version) distcc 3.2rc1 x86_64-pc-linux-gnu; built Nov 8 2014 22:04:02 [disabled] app-shells/bash: 4.3_p30-r1 dev-java/java-config: 2.2.0 dev-lang/perl: 5.20.1-r3 dev-lang/python: 2.7.8, 3.3.5-r1, 3.4.2 dev-util/cmake: 3.0.2 dev-util/pkgconfig: 0.28-r2 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.13.6 sys-apps/sandbox: 2.6-r1 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.9.6-r4, 1.10.3-r1, 1.11.6-r1, 1.12.6, 1.14.1 sys-devel/binutils: 2.24-r3 sys-devel/gcc: 4.8.3 sys-devel/gcc-config: 1.8 sys-devel/libtool: 2.4.3-r2 sys-devel/make: 4.1-r1 sys-kernel/linux-headers: 3.17-r1 (virtual/os-headers) sys-libs/glibc: 2.20 Repositories: gentoo sage-on-gentoo science sunrise x11 ago tlp local g-cpan g-octave Installed sets: @system ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* -@EULA PUEL Intel-SDP dlj-1.1 skype-eula skype-4.0.0.7-copyright googleearth AdobeFlash-11.x cadsoft Oracle-BCLA-JavaSE MakeMKV-EULA NVIDIA-CUDA Nero-AAC-EULA GIMPS" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=native -O2 -pipe" DISTDIR="/usr/portage/distfiles" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-march=native -O2 -pipe" GENTOO_MIRRORS="http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror http://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/ ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo ftp://ftp.tu-clausthal.de/pub/linux/gentoo ftp://ftp.easynet.nl/mirror/gentoo/ " LANG="en_US.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j3" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage_lynx" PORTDIR_OVERLAY="/var/lib/layman/sage-on-gentoo /var/lib/layman/science /var/lib/layman/sunrise /var/lib/layman/x11 /var/lib/layman/ago /var/lib/layman/tlp /usr/local/portage /var/lib/cpan /var/lib/g-octave" USE="64bit R X Xaw3d a52 aac acl acpi admin afs alsa amd64 ao apache2 apng applet archive armadillo arpack asf aspell atlas audacious audiofile automap automount bash-completion berkdb blas blast bluetooth bluray boost branding bzip2 cairo cdda cddb cdf cdio cdparanoia cdr cg cgi chm cli cmake consolekit cracklib crypt css cups curl cxx daap db dbi dbm dbus declarative designer devhelp device-mapper dga dia dirac djvu doc dot dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds egl elf emacs emboss emf encode epiphany evo examples exif expat extensions extra extras faac faad fam ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fortran95 fpm fpx fuse g3dvl garmin gcj gd gdal gdbm gdu gedit geoip geolocation geos gfortran gif gimp git glade glamor glib glpk gml gmp gnome gnome-keyring gnome-print gnuplot gnutls gold gphoto2 gpm grammar graphics graphtft graphviz grass gsl gsm gstreamer gtk gtk3 gudev guile hdaps hddtemp hdf hdf5 hdri html http httpd hvm hwdb iconv icq icu id3tag ide imagemagick imap inotify introspection ipod ipv6 irda ithreads jabber jadetex java java6 jbig jit john jpeg jpeg2k kate kdepim kdrive kerberos keymap kpathsea kvm ladspa lame lapack laptop latex lcms ldap lensfun libffi libkms libnotify libsamplerate lirc live lua lzma lzo mad mail maildir mapnik math matroska media-library mercurial mikmod mkl mmx mmxext mng mod modules mono motif mozilla mp3 mp4 mpeg mpi mplayer mtp multilib multimedia musepack musicbrainz mysql mysqli nautilus ncurses neXt netcdf netpbm network networking nfs nls nntp nptl nsplugin ntfs ntp numpy obex objc ocaml ocr octave odbc ofa ogdi ogg openexr opengl openmp openvg pam pango pcre pda pdf pdl2 perl plasma plotutils plugins png podcast policykit portaudio posix postgres postscript ppds preview-latex proj projectm pstricks pulseaudio python python-bindings q16 q32 qemu qhull qt3support qt4 quicktime raw readline reiserfs reports rle romio rpc rrdcgi rrdtool sage samba sasl schroedinger science sdk sdl secure-delete semantic-desktop server session shout sip slang slp smart smbclient smp sms sndfile snmp soap sockets sound soup sox speex spell sql sqlite sse sse2 sse4 sse4_1 ssl ssse3 startup-notification stlport subtitles subversion sudo suexec svg svm swig systemd szip t1lib tcl tcpd tex tex4ht texmacs theora thesaurus thinkpad threads thunderbird tidy tiff tk tools truetype udev udisks unicode upower usb utempter v4l vaapi vala valgrind vdpau video virt-network virtualbox visio vorbis vpx vtk wav webdav webdav-serf webkit wifi wmf wxwidgets x264 xa xattr xcb xetex xext xft xine xml xmlreader xmlrpc xpm xv xvid xvmc yaml youtube zlib zvbi" ABI_X86="64" ALSA_CARDS="intel8x0" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_core authn_dbm authn_default authn_file authz_core authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info lbmethod_byrequests log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif slotmem_shm so socache_shmcb speling status unique_id unixd userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="canon fuji ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog sensors thermal" CURL_SSL="nss" DRACUT_MODULES="caps lvm syslog" DVB_CARDS="usb-wt220u" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev synaptics void" KERNEL="linux" LCD_DEVICES="cfontz hd44780 mtxorb ncurses X lcd2usb lcdlinux png usblcd" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de fr ru" NETBEANS_MODULES="apisupport cnd dlight enterprise ergonomics groovy gsf harness ide identity j2ee java mobility nb php profiler websvccommon xml" OFFICE_IMPLEMENTATION="libreoffice" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" QEMU_SOFTMMU_TARGETS="arm i386 x86_64" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="nouveau displaylink" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, SYNC, USE_PYTHON ================================================================= Package Settings ================================================================= sci-mathematics/scilab-5.5.1 was built with the following: USE="bash-completion emf fftw gui matio mpi nls openmp tk umfpack xcos -debug -doc -static-libs -test" ABI_X86="64" LINGUAS="-ca_ES -cs_CZ -de_DE -es_ES -fr_FR -it_IT -ja_JP -pl_PL -pt_BR -ru_RU -uk_UA -zh_CN -zh_TW"
Any news?
Created attachment 394414 [details] paludis-build.log.xz Trying to install this with paludis gets even worse. With the default sandbox install, the unprivileged 'paludisbuild' user will not have access to write to /var/log/sandbox. Hence a sandbox log, like the one you attached, will not be available. See bug 537124 on how to resolve this.
Created attachment 394416 [details] sandbox-17621.log Having fixed bug 537124 a sandbox log will be generated, see sandbox-17621.log. But unlike portage, paludis will _not_ fail to emerge/cave scilab. This might be a wrong behavior of paludis and subject of another bug, since the PM cannot guarantee that the compile and install phases were successful IF sandbox violations occured. IMHO portage and paludis should both fail to merge an ebuild IF sandbox violations occured. If we know that sandbox-denying access to /proc/mtrr will not fail the target 'doc' from being built successfully, i.e. '/var/tmp/paludis/sci-mathematics-scilab-5.5.1/work/scilab-5.5.1/.libs/scilab-cli-bin \ -ns -noatomsautoload -f modules/functions/scripts/buildmacros/buildmacros.sce' runs fine and produces expected results without having written to /proc/mtrr then it might be added to SANDBOX_PREDICT for a fix. sandbox.conf comments say: # SANDBOX_PREDICT - respective paths are not writable, but no access violation # will be issued in the case of a write There have been other ebuilds facing the same problem, e.g. the imagemagick one. It's using 'addpredict' function in src_prepare() and installs a file to /etc/sandbox.d in src_install() to deal with the problem. See bug 472766 for further details on this. Again, addpredict may only be introduced as a fix, if we can assert that the 'doc' target succeeds without having had actual write access to /proc/mtrr. http://devmanual.gentoo.org/function-reference/sandbox-functions/
I can reproduce the error as well. I'm pretty sure /proc/mtrr is not needed since I've used that ebuild with no issue before, so that I've added addpredict /proc/mtrr to the ebuild and pushed it to the overlay.
